data_ADP
#

_chem_comp.id                                   ADP
_chem_comp.name                                 "ADENOSINE-5'-DIPHOSPHATE"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C10 H15 N5 O10 P2"
_chem_comp.mon_nstd_parent_comp_id              A
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    1999-07-08
_chem_comp.pdbx_modified_date                   2011-06-04
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       427.201
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    ADP
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1PHP
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
ADP  PB      PB    P  0  1  N  N  N  44.669  2.928  38.556   1.162  -0.221  -5.685  PB      ADP   1  
ADP  O1B     O1B   O  0  1  N  N  N  46.021  3.508  38.317   1.725   1.133  -5.492  O1B     ADP   2  
ADP  O2B     O2B   O  0  1  N  N  N  43.709  3.812  37.905   2.190  -1.112  -6.546  O2B     ADP   3  
ADP  O3B     O3B   O  0  1  N  N  N  44.459  1.449  38.382  -0.240  -0.113  -6.467  O3B     ADP   4  
ADP  PA      PA    P  0  1  N  N  S  43.230  2.955  41.110  -0.105   0.025  -3.446  PA      ADP   5  
ADP  O1A     O1A   O  0  1  N  N  N  41.975  3.497  40.573   0.476   1.376  -3.288  O1A     ADP   6  
ADP  O2A     O2A   O  0  1  N  N  N  42.962  1.501  41.401  -1.487   0.129  -4.266  O2A     ADP   7  
ADP  O3A     O3A   O  0  1  N  N  N  44.522  3.210  40.212   0.925  -0.913  -4.250  O3A     ADP   8  
ADP  "O5'"   O5*   O  0  1  N  N  N  43.462  3.832  42.407  -0.389  -0.609  -1.994  "O5'"   ADP   9  
ADP  "C5'"   C5*   C  0  1  N  N  N  43.735  5.246  42.335  -1.307   0.264  -1.333  "C5'"   ADP  10  
ADP  "C4'"   C4*   C  0  1  N  N  R  43.095  5.810  43.626  -1.620  -0.284   0.059  "C4'"   ADP  11  
ADP  "O4'"   O4*   O  0  1  N  N  N  43.764  5.261  44.779  -0.417  -0.348   0.857  "O4'"   ADP  12  
ADP  "C3'"   C3*   C  0  1  N  N  S  43.337  7.325  43.617  -2.550   0.683   0.825  "C3'"   ADP  13  
ADP  "O3'"   O3*   O  0  1  N  N  N  42.056  7.988  43.560  -3.907   0.245   0.739  "O3'"   ADP  14  
ADP  "C2'"   C2*   C  0  1  N  N  R  43.946  7.593  45.083  -2.047   0.611   2.286  "C2'"   ADP  15  
ADP  "O2'"   O2*   O  0  1  N  N  N  43.554  8.726  45.877  -3.080   0.129   3.148  "O2'"   ADP  16  
ADP  "C1'"   C1*   C  0  1  N  N  R  43.613  6.275  45.813  -0.871  -0.388   2.227  "C1'"   ADP  17  
ADP  N9      N9    N  0  1  Y  N  N  44.375  5.781  46.991   0.201   0.031   3.132  N9      ADP  18  
ADP  C8      C8    C  0  1  Y  N  N  45.711  5.486  47.062   1.231   0.870   2.827  C8      ADP  19  
ADP  N7      N7    N  0  1  Y  N  N  46.202  5.379  48.282   2.000   1.027   3.865  N7      ADP  20  
ADP  C5      C5    C  0  1  Y  N  N  45.067  5.597  49.064   1.509   0.305   4.902  C5      ADP  21  
ADP  C6      C6    C  0  1  Y  N  N  44.883  5.623  50.499   1.910   0.087   6.231  C6      ADP  22  
ADP  N6      N6    N  0  1  N  N  N  45.912  5.433  51.325   3.044   0.697   6.738  N6      ADP  23  
ADP  N1      N1    N  0  1  Y  N  N  43.626  5.852  50.896   1.171  -0.714   6.991  N1      ADP  24  
ADP  C2      C2    C  0  1  Y  N  N  42.590  6.076  50.067   0.088  -1.300   6.516  C2      ADP  25  
ADP  N3      N3    N  0  1  Y  N  N  42.675  6.067  48.735  -0.321  -1.130   5.277  N3      ADP  26  
ADP  C4      C4    C  0  1  Y  N  N  43.951  5.821  48.304   0.353  -0.346   4.442  C4      ADP  27  
ADP  HOB2    2HOB  H  0  0  N  N  N  42.847  3.442  38.057   2.304  -0.664  -7.396  HOB2    ADP  28  
ADP  HOB3    3HOB  H  0  0  N  N  N  43.597  1.079  38.534  -0.572  -1.016  -6.571  HOB3    ADP  29  
ADP  HOA2    2HOA  H  0  0  N  N  N  43.773  1.150  41.748  -1.833  -0.770  -4.346  HOA2    ADP  30  
ADP  "H5'1"  1H5*  H  0  0  N  N  N  44.812  5.500  42.206  -2.227   0.330  -1.913  "H5'1"  ADP  31  
ADP  "H5'2"  2H5*  H  0  0  N  N  N  43.385  5.735  41.396  -0.862   1.255  -1.242  "H5'2"  ADP  32  
ADP  "H4'"   H4*   H  0  1  N  N  N  42.010  5.556  43.668  -2.078  -1.270  -0.015  "H4'"   ADP  33  
ADP  "H3'"   H3*   H  0  1  N  N  N  43.978  7.672  42.773  -2.451   1.696   0.435  "H3'"   ADP  34  
ADP  "HO3'"  *HO3  H  0  0  N  N  N  42.205  8.926  43.554  -4.439   0.884   1.233  "HO3'"  ADP  35  
ADP  "H2'"   H2*   H  0  1  N  N  N  45.014  7.879  44.941  -1.699   1.589   2.618  "H2'"   ADP  36  
ADP  "HO2'"  *HO2  H  0  0  N  N  N  43.913  8.884  46.742  -3.807   0.764   3.094  "HO2'"  ADP  37  
ADP  "H1'"   H1*   H  0  1  N  N  N  42.621  6.482  46.279  -1.212  -1.391   2.485  "H1'"   ADP  38  
ADP  H8      H8    H  0  1  N  N  N  46.358  5.341  46.181   1.387   1.335   1.865  H8      ADP  39  
ADP  HN61    1HN6  H  0  0  N  N  N  45.782  5.451  52.336   3.308   0.542   7.658  HN61    ADP  40  
ADP  HN62    2HN6  H  0  0  N  N  N  46.639  6.107  51.086   3.577   1.277   6.172  HN62    ADP  41  
ADP  H2      H2    H  0  1  N  N  N  41.601  6.281  50.510  -0.482  -1.944   7.169  H2      ADP  42  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ADP  PB     O1B     DOUB  N  N   1  
ADP  PB     O2B     SING  N  N   2  
ADP  PB     O3B     SING  N  N   3  
ADP  PB     O3A     SING  N  N   4  
ADP  O2B    HOB2    SING  N  N   5  
ADP  O3B    HOB3    SING  N  N   6  
ADP  PA     O1A     DOUB  N  N   7  
ADP  PA     O2A     SING  N  N   8  
ADP  PA     O3A     SING  N  N   9  
ADP  PA     "O5'"   SING  N  N  10  
ADP  O2A    HOA2    SING  N  N  11  
ADP  "O5'"  "C5'"   SING  N  N  12  
ADP  "C5'"  "C4'"   SING  N  N  13  
ADP  "C5'"  "H5'1"  SING  N  N  14  
ADP  "C5'"  "H5'2"  SING  N  N  15  
ADP  "C4'"  "O4'"   SING  N  N  16  
ADP  "C4'"  "C3'"   SING  N  N  17  
ADP  "C4'"  "H4'"   SING  N  N  18  
ADP  "O4'"  "C1'"   SING  N  N  19  
ADP  "C3'"  "O3'"   SING  N  N  20  
ADP  "C3'"  "C2'"   SING  N  N  21  
ADP  "C3'"  "H3'"   SING  N  N  22  
ADP  "O3'"  "HO3'"  SING  N  N  23  
ADP  "C2'"  "O2'"   SING  N  N  24  
ADP  "C2'"  "C1'"   SING  N  N  25  
ADP  "C2'"  "H2'"   SING  N  N  26  
ADP  "O2'"  "HO2'"  SING  N  N  27  
ADP  "C1'"  N9      SING  N  N  28  
ADP  "C1'"  "H1'"   SING  N  N  29  
ADP  N9     C8      SING  Y  N  30  
ADP  N9     C4      SING  Y  N  31  
ADP  C8     N7      DOUB  Y  N  32  
ADP  C8     H8      SING  N  N  33  
ADP  N7     C5      SING  Y  N  34  
ADP  C5     C6      SING  Y  N  35  
ADP  C5     C4      DOUB  Y  N  36  
ADP  C6     N6      SING  N  N  37  
ADP  C6     N1      DOUB  Y  N  38  
ADP  N6     HN61    SING  N  N  39  
ADP  N6     HN62    SING  N  N  40  
ADP  N1     C2      SING  Y  N  41  
ADP  C2     N3      DOUB  Y  N  42  
ADP  C2     H2      SING  N  N  43  
ADP  N3     C4      SING  Y  N  44  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
ADP  SMILES            ACDLabs               10.04  "O=P(O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O"  
ADP  SMILES_CANONICAL  CACTVS                3.341  "Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O"  
ADP  SMILES            CACTVS                3.341  "Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O"  
ADP  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)OP(=O)(O)O)O)O)N"  
ADP  SMILES            "OpenEye OEToolkits"  1.5.0  "c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)O)O)O)N"  
ADP  InChI             InChI                 1.03   "InChI=1S/C10H15N5O10P2/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(24-10)1-23-27(21,22)25-26(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1"  
ADP  InChIKey          InChI                 1.03   XTWYTFMLZFPYCI-KQYNXXCUSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
ADP  "SYSTEMATIC NAME"  ACDLabs               10.04  "adenosine 5'-(trihydrogen diphosphate)"  
ADP  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methyl phosphono hydrogen phosphate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
ADP  "Create component"   1999-07-08  RCSB  
ADP  "Modify descriptor"  2011-06-04  RCSB  
##
