data_B6D
#

_chem_comp.id                                   B6D
_chem_comp.name                                 "2,4-bisacetamido-2,4,6-trideoxy-beta-D-glucopyranose"
_chem_comp.type                                 "D-saccharide, beta linking"
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C10 H18 N2 O5"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        
;2,4-bis(acetylamino)-2,4,6-trideoxy-beta-D-glucopyranose; 2,4-diacetamido-2,4,6-trideoxy-beta-D-glucopyranose;
bacillosamine; 2,4-bisacetamido-2,4,6-trideoxy-beta-D-glucose; 2,4-bisacetamido-2,4,6-trideoxy-D-glucose;
2,4-bisacetamido-2,4,6-trideoxy-glucose
;

_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2008-05-01
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       246.260
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    B6D
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       2K33
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
B6D  C1   C1   C  0  1  N  N  R  -19.700  3.931  12.813   1.190   1.303  -0.511  C1   B6D   1  
B6D  N2   N2   N  0  1  N  N  N  -18.938  1.957  14.068   2.431  -0.805  -0.439  N2   B6D   2  
B6D  C3   C3   C  0  1  N  N  S  -19.032  1.842  11.573  -0.015  -0.881  -0.406  C3   B6D   3  
B6D  C4   C4   C  0  1  N  N  S  -19.836  2.326  10.353  -1.262  -0.114   0.047  C4   B6D   4  
B6D  C5   C5   C  0  1  N  N  R  -19.924  3.866  10.326  -1.209   1.309  -0.516  C5   B6D   5  
B6D  C6   C6   C  0  1  N  N  N  -20.861  4.414   9.251  -2.420   2.100  -0.019  C6   B6D   6  
B6D  C7   C7   C  0  1  N  N  N  -19.448  1.954  15.345   3.606  -0.654   0.205  C7   B6D   7  
B6D  C8   C8   C  0  1  N  N  N  -18.443  1.609  16.471   4.838  -1.358  -0.301  C8   B6D   8  
B6D  C9   C9   C  0  1  N  N  N  -17.697  1.765   7.184  -4.870  -1.340  -0.315  C9   B6D   9  
B6D  C2   C2   C  0  1  N  N  R  -19.671  2.392  12.870   1.233  -0.120   0.053  C2   B6D  10  
B6D  O7   O7   O  0  1  N  N  N  -20.615  2.179  15.609   3.671   0.050   1.191  O7   B6D  11  
B6D  N4   N4   N  0  1  N  N  N  -19.232  1.836   9.107  -2.461  -0.793  -0.448  N4   B6D  12  
B6D  C10  C10  C  0  1  N  N  N  -18.067  2.326   8.571  -3.636  -0.641   0.195  C10  B6D  13  
B6D  O10  O10  O  0  1  N  N  N  -17.344  3.129   9.135  -3.700   0.059   1.183  O10  B6D  14  
B6D  O5   O5   O  0  1  N  N  N  -20.463  4.349  11.620  -0.009   1.949  -0.077  O5   B6D  15  
B6D  O3   O3   O  0  1  N  N  N  -19.060  0.368  11.598  -0.020  -2.186   0.176  O3   B6D  16  
B6D  H2   H2   H  0  1  N  N  N  -20.694  1.994  12.939   1.256  -0.080   1.142  H2   B6D  17  
B6D  H1   H1   H  0  1  N  N  N  -18.677  4.329  12.749   1.208   1.263  -1.600  H1   B6D  18  
B6D  H3   H3   H  0  1  N  N  N  -17.994  2.200  11.505  -0.012  -0.965  -1.492  H3   B6D  19  
B6D  HN2  HN2  H  0  1  N  N  N  -17.998  1.639  13.945   2.379  -1.367  -1.227  HN2  B6D  20  
B6D  H5   H5   H  0  1  N  N  N  -18.902  4.215  10.119  -1.222   1.269  -1.605  H5   B6D  21  
B6D  H81  H8   H  0  1  N  N  N  -17.431  1.527  16.048   5.356  -0.717  -1.015  H81  B6D  22  
B6D  H83  H8A  H  0  1  N  N  N  -18.725  0.652  16.933   5.501  -1.577   0.537  H83  B6D  23  
B6D  H82  H8B  H  0  1  N  N  N  -18.459  2.403  17.232   4.550  -2.289  -0.790  H82  B6D  24  
B6D  H4   H4   H  0  1  N  N  N  -20.854  1.919  10.438  -1.289  -0.074   1.136  H4   B6D  25  
B6D  HN4  HN4  H  0  1  N  N  N  -19.699  1.099   8.618  -2.410  -1.353  -1.239  HN4  B6D  26  
B6D  H9   H9   H  0  1  N  N  N  -16.737  1.232   7.249  -5.630  -0.600  -0.565  H9   B6D  27  
B6D  H9A  H9A  H  0  1  N  N  N  -17.609  2.593   6.465  -4.619  -1.918  -1.204  H9A  B6D  28  
B6D  H9B  H9B  H  0  1  N  N  N  -18.481  1.070   6.849  -5.254  -2.008   0.456  H9B  B6D  29  
B6D  H62  H6   H  0  1  N  N  N  -20.483  5.384   8.895  -2.382   3.113  -0.420  H62  B6D  30  
B6D  H6A  H6A  H  0  1  N  N  N  -20.907  3.707   8.410  -3.335   1.611  -0.353  H6A  B6D  31  
B6D  H61  H6B  H  0  1  N  N  N  -21.868  4.546   9.674  -2.406   2.139   1.071  H61  B6D  32  
B6D  O1   O51  O  0  1  N  Y  N  -20.317  4.438  13.999   2.323   2.036  -0.041  O1   B6D  33  
B6D  HO3  HO3  H  0  1  N  Y  N  -19.066  0.036  10.708   0.746  -2.726  -0.064  HO3  B6D  34  
B6D  HO1  H18  H  0  1  N  Y  N  -19.659  4.550  14.675   2.361   2.948  -0.360  HO1  B6D  35  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
B6D  C1   C2   SING  N  N   1  
B6D  C1   O1   SING  N  N   2  
B6D  N2   C7   SING  N  N   3  
B6D  C3   O3   SING  N  N   4  
B6D  C3   C2   SING  N  N   5  
B6D  C4   C3   SING  N  N   6  
B6D  C4   H4   SING  N  N   7  
B6D  C5   C4   SING  N  N   8  
B6D  C5   O5   SING  N  N   9  
B6D  C6   C5   SING  N  N  10  
B6D  C6   H61  SING  N  N  11  
B6D  C7   O7   DOUB  N  N  12  
B6D  C7   C8   SING  N  N  13  
B6D  C8   H81  SING  N  N  14  
B6D  C8   H82  SING  N  N  15  
B6D  C9   H9A  SING  N  N  16  
B6D  C9   C10  SING  N  N  17  
B6D  C2   N2   SING  N  N  18  
B6D  C2   H2   SING  N  N  19  
B6D  N4   C4   SING  N  N  20  
B6D  C10  N4   SING  N  N  21  
B6D  C10  O10  DOUB  N  N  22  
B6D  O5   C1   SING  N  N  23  
B6D  O3   HO3  SING  N  N  24  
B6D  H1   C1   SING  N  N  25  
B6D  H3   C3   SING  N  N  26  
B6D  HN2  N2   SING  N  N  27  
B6D  H5   C5   SING  N  N  28  
B6D  H83  C8   SING  N  N  29  
B6D  HN4  N4   SING  N  N  30  
B6D  H9   C9   SING  N  N  31  
B6D  H9B  C9   SING  N  N  32  
B6D  H62  C6   SING  N  N  33  
B6D  H6A  C6   SING  N  N  34  
B6D  O1   HO1  SING  N  N  35  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
B6D  SMILES            ACDLabs               10.04  "O=C(NC1C(OC(O)C(NC(=O)C)C1O)C)C"  
B6D  SMILES_CANONICAL  CACTVS                3.341  "C[C@H]1O[C@@H](O)[C@H](NC(C)=O)[C@@H](O)[C@@H]1NC(C)=O"  
B6D  SMILES            CACTVS                3.341  "C[CH]1O[CH](O)[CH](NC(C)=O)[CH](O)[CH]1NC(C)=O"  
B6D  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "C[C@@H]1[C@H]([C@@H]([C@H]([C@@H](O1)O)NC(=O)C)O)NC(=O)C"  
B6D  SMILES            "OpenEye OEToolkits"  1.5.0  "CC1C(C(C(C(O1)O)NC(=O)C)O)NC(=O)C"  
B6D  InChI             InChI                 1.03   "InChI=1S/C10H18N2O5/c1-4-7(11-5(2)13)9(15)8(10(16)17-4)12-6(3)14/h4,7-10,15-16H,1-3H3,(H,11,13)(H,12,14)/t4-,7-,8-,9+,10-/m1/s1"  
B6D  InChIKey          InChI                 1.03   NRXWTRNYICXMBF-DAJIKZSHSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
B6D  "SYSTEMATIC NAME"            ACDLabs               10.04  "2,4-bis(acetylamino)-2,4,6-trideoxy-beta-D-glucopyranose"  
B6D  "SYSTEMATIC NAME"            "OpenEye OEToolkits"  1.5.0  "N-[(2R,3R,4S,5S,6R)-5-acetamido-2,4-dihydroxy-6-methyl-oxan-3-yl]ethanamide"  
B6D  "IUPAC CARBOHYDRATE SYMBOL"  PDB-CARE              1.0    b-D-6-deoxy-GlcpNAc4NAc  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
B6D  "Create component"          2008-05-01  RCSB  
B6D  "Modify descriptor"         2011-06-04  RCSB  
B6D  "Modify synonyms"           2020-05-26  PDBE  
B6D  "Other modification"        2020-07-03  RCSB  
B6D  "Modify name"               2020-07-17  RCSB  
B6D  "Modify synonyms"           2020-07-17  RCSB  
B6D  "Modify linking type"       2020-07-17  RCSB  
B6D  "Modify atom id"            2020-07-17  RCSB  
B6D  "Modify component atom id"  2020-07-17  RCSB  
B6D  "Modify leaving atom flag"  2020-07-17  RCSB  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
B6D  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
B6D  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
B6D  "CARBOHYDRATE ANOMER"                  beta      PDB  ?  
B6D  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  B6D  "2,4-bis(acetylamino)-2,4,6-trideoxy-beta-D-glucopyranose"  PDB  ?  
2  B6D  "2,4-diacetamido-2,4,6-trideoxy-beta-D-glucopyranose"       PDB  ?  
3  B6D  bacillosamine                                               PDB  ?  
4  B6D  "2,4-bisacetamido-2,4,6-trideoxy-beta-D-glucose"            PDB  ?  
5  B6D  "2,4-bisacetamido-2,4,6-trideoxy-D-glucose"                 PDB  ?  
6  B6D  "2,4-bisacetamido-2,4,6-trideoxy-glucose"                   PDB  ?  
##
