data_BJM
#

_chem_comp.id                                   BJM
_chem_comp.name                                 
;(2~{S})-2-azanyl-1-[(1~{S},3~{S},5~{S})-3-(iminomethyl)-2-azabicyclo[3.1.0]hexan-2-yl]-2-[(5~{R},7~{S})-3-oxidanyl-1-ad
amantyl]ethanone
;

_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C18 H27 N3 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "Saxagliptin, bound form"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2007-12-13
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       317.426
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    BJM
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3BJM
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
BJM  C1   C1   C  0  1  N  N  N  46.780  50.851  35.045  -0.915   0.345   0.397  C1   BJM   1  
BJM  C2   C2   C  0  1  N  N  S  46.417  51.403  36.461   0.276   0.517   1.342  C2   BJM   2  
BJM  C3   C3   C  0  1  N  N  N  47.285  49.386  35.253  -2.057  -0.352   1.139  C3   BJM   3  
BJM  C8   C4   C  0  1  N  N  N  47.454  48.652  33.913  -3.249  -0.524   0.194  C8   BJM   4  
BJM  C9   C5   C  0  1  N  N  R  45.788  50.190  32.767  -2.576   1.547  -1.031  C9   BJM   5  
BJM  C10  C6   C  0  1  N  N  S  48.277  50.883  32.887  -1.686  -0.675  -1.750  C10  BJM   6  
BJM  C13  C7   C  0  1  N  N  N  46.143  48.736  33.099  -3.718   0.849  -0.290  C13  BJM   7  
BJM  C14  C8   C  0  1  N  N  N  48.642  49.361  33.142  -2.828  -1.372  -1.008  C14  BJM   8  
BJM  C16  C9   C  0  1  N  N  N  46.977  50.904  32.003  -2.155   0.699  -2.234  C16  BJM   9  
BJM  C19  C10  C  0  1  N  N  S  47.223  49.007  40.090   4.346  -0.499  -1.088  C19  BJM  10  
BJM  C20  C11  C  0  1  N  N  N  47.564  48.194  38.886   4.784   0.812  -0.433  C20  BJM  11  
BJM  C21  C12  C  0  1  N  N  N  48.181  50.020  40.690   3.731  -1.595  -0.188  C21  BJM  12  
BJM  C22  C13  C  0  1  N  N  N  50.139  50.241  39.110   1.564  -1.772   1.069  C22  BJM  13  
BJM  N23  N1   N  0  1  N  N  N  50.300  49.757  37.842   0.585  -2.588   0.959  N23  BJM  14  
BJM  C4   C14  C  0  1  N  N  N  45.510  50.832  34.152  -1.385   1.719  -0.087  C4   BJM  15  
BJM  C5   C15  C  0  1  N  N  N  47.888  51.615  34.247  -0.495  -0.503  -0.805  C5   BJM  16  
BJM  C6   C16  C  0  1  N  N  N  47.652  51.445  37.398   1.444   1.087   0.579  C6   BJM  17  
BJM  N7   N2   N  0  1  N  N  N  45.883  52.757  36.426  -0.091   1.433   2.431  N7   BJM  18  
BJM  N11  N3   N  0  1  N  N  N  47.703  50.527  38.375   2.246   0.271  -0.133  N11  BJM  19  
BJM  O12  O1   O  0  1  N  N  N  48.539  52.284  37.257   1.662   2.280   0.605  O12  BJM  20  
BJM  O15  O2   O  0  1  N  N  N  47.547  47.289  34.222  -4.315  -1.176   0.887  O15  BJM  21  
BJM  C17  C17  C  0  1  N  N  S  46.735  49.442  38.775   3.342   0.669  -1.037  C17  BJM  22  
BJM  C18  C18  C  0  1  N  N  S  48.686  50.700  39.480   2.227  -1.220  -0.167  C18  BJM  23  
BJM  H1   H1   H  0  1  N  N  N  45.671  50.729  36.908   0.552  -0.451   1.759  H1   BJM  24  
BJM  H2   H2   H  0  1  N  N  N  46.555  48.841  35.870  -1.723  -1.331   1.483  H2   BJM  25  
BJM  H3   H3   H  0  1  N  N  N  48.255  49.413  35.771  -2.357   0.252   1.995  H3   BJM  26  
BJM  H4   H4   H  0  1  N  N  N  44.879  50.227  32.148  -2.911   2.525  -1.376  H4   BJM  27  
BJM  H5   H5   H  0  1  N  N  N  49.105  51.406  32.385  -1.386  -1.279  -2.606  H5   BJM  28  
BJM  H6   H6   H  0  1  N  N  N  45.326  48.293  33.688  -4.567   0.727  -0.963  H6   BJM  29  
BJM  H7   H7   H  0  1  N  N  N  46.266  48.174  32.162  -4.018   1.453   0.566  H7   BJM  30  
BJM  H8   H8   H  0  1  N  N  N  48.805  48.857  32.178  -2.493  -2.351  -0.663  H8   BJM  31  
BJM  H9   H9   H  0  1  N  N  N  49.559  49.301  33.747  -3.677  -1.495  -1.681  H9   BJM  32  
BJM  H10  H10  H  0  1  N  N  N  47.171  50.376  31.058  -3.004   0.576  -2.907  H10  BJM  33  
BJM  H11  H11  H  0  1  N  N  N  46.699  51.947  31.790  -1.342   1.196  -2.762  H11  BJM  34  
BJM  H12  H12  H  0  1  N  N  N  46.482  48.576  40.780   4.812  -0.815  -2.021  H12  BJM  35  
BJM  H13  H13  H  0  1  N  N  N  47.102  47.207  38.735   4.894   0.820   0.651  H13  BJM  36  
BJM  H14  H14  H  0  1  N  N  N  48.595  48.178  38.503   5.490   1.436  -0.982  H14  BJM  37  
BJM  H15  H15  H  0  1  N  N  N  48.994  49.526  41.242   3.877  -2.582  -0.627  H15  BJM  38  
BJM  H16  H16  H  0  1  N  N  N  47.658  50.722  41.357   4.156  -1.554   0.815  H16  BJM  39  
BJM  H17  H17  H  0  1  N  N  N  50.958  50.303  39.811   1.915  -1.478   2.047  H17  BJM  40  
BJM  H19  H19  H  0  1  N  Y  N  51.244  49.481  37.664   0.157  -2.942   1.755  H19  BJM  41  
BJM  H22  H22  H  0  1  N  N  N  45.165  51.866  34.002  -1.684   2.323   0.770  H22  BJM  42  
BJM  H23  H23  H  0  1  N  N  N  44.725  50.253  34.661  -0.571   2.216  -0.615  H23  BJM  43  
BJM  H24  H24  H  0  1  N  N  N  48.787  51.690  34.876   0.319  -0.006  -1.333  H24  BJM  44  
BJM  H25  H25  H  0  1  N  N  N  47.520  52.624  34.011  -0.160  -1.481  -0.460  H25  BJM  45  
BJM  H26  H26  H  0  1  N  N  N  45.670  53.056  37.356   0.657   1.513   3.103  H26  BJM  46  
BJM  H27  H27  H  0  1  N  N  N  46.562  53.373  36.025  -0.351   2.338   2.069  H27  BJM  47  
BJM  H29  H29  H  0  1  N  N  N  48.334  47.132  34.730  -5.106  -1.318   0.347  H29  BJM  48  
BJM  H30  H30  H  0  1  N  N  N  45.676  49.440  38.477   3.076   1.236  -1.929  H30  BJM  49  
BJM  H31  H31  H  0  1  N  N  N  48.745  51.775  39.703   1.724  -1.579  -1.064  H31  BJM  50  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
BJM  C16  C9   SING  N  N   1  
BJM  C16  C10  SING  N  N   2  
BJM  C9   C13  SING  N  N   3  
BJM  C9   C4   SING  N  N   4  
BJM  C10  C14  SING  N  N   5  
BJM  C10  C5   SING  N  N   6  
BJM  C13  C8   SING  N  N   7  
BJM  C14  C8   SING  N  N   8  
BJM  C8   O15  SING  N  N   9  
BJM  C8   C3   SING  N  N  10  
BJM  C4   C1   SING  N  N  11  
BJM  C5   C1   SING  N  N  12  
BJM  C1   C3   SING  N  N  13  
BJM  C1   C2   SING  N  N  14  
BJM  N7   C2   SING  N  N  15  
BJM  C2   C6   SING  N  N  16  
BJM  O12  C6   DOUB  N  N  17  
BJM  C6   N11  SING  N  N  18  
BJM  N23  C22  DOUB  N  N  19  
BJM  N11  C17  SING  N  N  20  
BJM  N11  C18  SING  N  N  21  
BJM  C17  C20  SING  N  N  22  
BJM  C17  C19  SING  N  N  23  
BJM  C20  C19  SING  N  N  24  
BJM  C22  C18  SING  N  N  25  
BJM  C18  C21  SING  N  N  26  
BJM  C19  C21  SING  N  N  27  
BJM  C2   H1   SING  N  N  28  
BJM  C3   H2   SING  N  N  29  
BJM  C3   H3   SING  N  N  30  
BJM  C9   H4   SING  N  N  31  
BJM  C10  H5   SING  N  N  32  
BJM  C13  H6   SING  N  N  33  
BJM  C13  H7   SING  N  N  34  
BJM  C14  H8   SING  N  N  35  
BJM  C14  H9   SING  N  N  36  
BJM  C16  H10  SING  N  N  37  
BJM  C16  H11  SING  N  N  38  
BJM  C19  H12  SING  N  N  39  
BJM  C20  H13  SING  N  N  40  
BJM  C20  H14  SING  N  N  41  
BJM  C21  H15  SING  N  N  42  
BJM  C21  H16  SING  N  N  43  
BJM  C22  H17  SING  N  N  44  
BJM  N23  H19  SING  N  N  45  
BJM  C4   H22  SING  N  N  46  
BJM  C4   H23  SING  N  N  47  
BJM  C5   H24  SING  N  N  48  
BJM  C5   H25  SING  N  N  49  
BJM  N7   H26  SING  N  N  50  
BJM  N7   H27  SING  N  N  51  
BJM  O15  H29  SING  N  N  52  
BJM  C17  H30  SING  N  N  53  
BJM  C18  H31  SING  N  N  54  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
BJM  InChI             InChI                 1.03   "InChI=1S/C18H27N3O2/c19-8-13-2-12-3-14(12)21(13)16(22)15(20)17-4-10-1-11(5-17)7-18(23,6-10)9-17/h8,10-15,19,23H,1-7,9,20H2/t10-,11+,12-,13+,14+,15-,17+,18-/m1/s1"  
BJM  InChIKey          InChI                 1.03   KMSQNYQXZPWGMJ-YQBUGCKMSA-N  
BJM  SMILES_CANONICAL  CACTVS                3.385  "N[C@H](C(=O)N1[C@@H](C[C@@H]2C[C@H]12)C=N)C34C[C@H]5C[C@H](CC(O)(C5)C3)C4"  
BJM  SMILES            CACTVS                3.385  "N[CH](C(=O)N1[CH](C[CH]2C[CH]12)C=N)C34C[CH]5C[CH](CC(O)(C5)C3)C4"  
BJM  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "C1[C@@H]2C[C@@H]2N([C@@H]1C=N)C(=O)[C@H](C34C[C@H]5C[C@@H](C3)CC(C5)(C4)O)N"  
BJM  SMILES            "OpenEye OEToolkits"  2.0.6  "C1C2CC2N(C1C=N)C(=O)C(C34CC5CC(C3)CC(C5)(C4)O)N"  
#
_pdbx_chem_comp_identifier.comp_id          BJM
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.6
_pdbx_chem_comp_identifier.identifier       "(2~{S})-2-azanyl-1-[(1~{S},3~{S},5~{S})-3-(iminomethyl)-2-azabicyclo[3.1.0]hexan-2-yl]-2-[(5~{R},7~{S})-3-oxidanyl-1-adamantyl]ethanone"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
BJM  "Create component"   2007-12-13  RCSB  
BJM  "Modify descriptor"  2011-06-04  RCSB  
BJM  "Modify synonyms"    2016-04-12  RCSB  
BJM  "Modify synonyms"    2018-02-05  RCSB  
BJM  "Modify synonyms"    2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     BJM
_pdbx_chem_comp_synonyms.name        "Saxagliptin, bound form"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
