data_CB9
#

_chem_comp.id                                   CB9
_chem_comp.name                                 "(2R,4S)-2-[(1R)-1-{[(2S)-2-carboxy-2-phenylacetyl]amino}-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C17 H20 N2 O6 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "Bound form of Carbenicillin"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2010-10-12
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       380.416
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    CB9
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3OCL
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
CB9  C     C     C  0  1  N  N  N   6.516   6.234  -17.318  -0.672  -2.288   0.470  C     CB9   1  
CB9  N     N     N  0  1  N  N  N   6.799   3.753  -16.973   0.513  -0.287  -0.224  N     CB9   2  
CB9  O     O     O  0  1  N  N  N   6.458   6.264  -16.096   0.012  -2.856  -0.346  O     CB9   3  
CB9  CA    CA    C  0  1  N  N  R   6.490   4.833  -17.946  -0.520  -0.803   0.677  CA    CB9   4  
CB9  CB    CB    C  0  1  N  N  R   5.110   4.668  -18.630  -1.850  -0.107   0.379  CB    CB9   5  
CB9  CAA   CAA   C  0  1  N  N  N   2.814   2.528  -16.396  -5.142  -1.472  -1.342  CAA   CB9   6  
CB9  CAB   CAB   C  0  1  N  N  N   1.724   3.522  -18.410  -4.755   1.013  -1.374  CAB   CB9   7  
CB9  OAD   OAD   O  0  1  N  N  N   1.682   5.702  -15.473  -3.878   1.828   1.626  OAD   CB9   8  
CB9  OAE   OAE   O  0  1  N  N  N   9.623   2.609  -15.673   1.685   2.210  -0.536  OAE   CB9   9  
CB9  OAF   OAF   O  0  1  N  N  N   7.644   2.587  -18.661   2.122  -0.814   1.210  OAF   CB9  10  
CB9  OAG   OAG   O  0  1  N  N  N   1.654   6.536  -17.514  -5.989   1.391   1.138  OAG   CB9  11  
CB9  OAH   OAH   O  0  1  N  N  N   9.774   0.449  -15.855   3.455   2.341  -1.854  OAH   CB9  12  
CB9  CAJ   CAJ   C  0  1  Y  N  N   4.879  -0.179  -14.014   6.714  -0.306   1.013  CAJ   CB9  13  
CB9  CAK   CAK   C  0  1  Y  N  N   4.913  -0.569  -15.347   6.435  -0.914  -0.196  CAK   CB9  14  
CB9  CAL   CAL   C  0  1  Y  N  N   5.804   0.750  -13.533   5.750   0.461   1.641  CAL   CB9  15  
CB9  CAM   CAM   C  0  1  Y  N  N   5.876  -0.027  -16.192   5.192  -0.753  -0.779  CAM   CB9  16  
CB9  CAN   CAN   C  0  1  Y  N  N   6.769   1.295  -14.379   4.508   0.622   1.057  CAN   CB9  17  
CB9  NAP   NAP   N  0  1  N  N  N   4.102   5.516  -18.035  -2.930  -0.605   1.277  NAP   CB9  18  
CB9  SAQ   SAQ   S  0  1  N  N  N   4.377   3.069  -18.518  -2.507  -0.609  -1.266  SAQ   CB9  19  
CB9  CAR   CAR   C  0  1  N  N  N   2.124   5.773  -16.641  -4.693   1.047   1.194  CAR   CB9  20  
CB9  CAS   CAS   C  0  1  N  N  N   9.157   1.515  -16.025   2.627   1.655  -1.050  CAS   CB9  21  
CB9  CAT   CAT   C  0  1  N  N  N   7.400   2.655  -17.472   1.810  -0.340   0.138  CAT   CB9  22  
CB9  CAU   CAU   C  0  1  Y  N  N   6.796   0.915  -15.720   4.228   0.015  -0.153  CAU   CB9  23  
CB9  CAX   CAX   C  0  1  N  N  S   3.304   4.918  -16.998  -4.253  -0.313   0.717  CAX   CB9  24  
CB9  CAY   CAY   C  0  1  N  N  S   7.808   1.424  -16.685   2.873   0.191  -0.789  CAY   CB9  25  
CB9  CAZ   CAZ   C  0  1  N  N  N   2.973   3.524  -17.538  -4.268  -0.329  -0.823  CAZ   CB9  26  
CB9  H     H     H  0  1  N  N  N   6.581   7.132  -17.914  -1.396  -2.842   1.048  H     CB9  27  
CB9  HN    HN    H  0  1  N  N  N   6.574   3.836  -16.002   0.264   0.092  -1.081  HN    CB9  28  
CB9  HA    HA    H  0  1  N  N  N   7.254   4.810  -18.737  -0.232  -0.608   1.710  HA    CB9  29  
CB9  HB    HB    H  0  1  N  N  N   5.214   4.891  -19.702  -1.749   0.976   0.449  HB    CB9  30  
CB9  HAA   HAA   H  0  1  N  N  N   3.720   2.537  -15.772  -5.106  -1.492  -2.431  HAA   CB9  31  
CB9  HAAA  HAAA  H  0  0  N  N  N   1.945   2.809  -15.783  -4.772  -2.420  -0.949  HAAA  CB9  32  
CB9  HAAB  HAAB  H  0  0  N  N  N   2.662   1.519  -16.808  -6.170  -1.321  -1.015  HAAB  CB9  33  
CB9  HAB   HAB   H  0  1  N  N  N   1.848   4.244  -19.231  -5.780   1.188  -1.048  HAB   CB9  34  
CB9  HABA  HABA  H  0  0  N  N  N   1.569   2.516  -18.827  -4.114   1.812  -1.004  HABA  CB9  35  
CB9  HABB  HABB  H  0  0  N  N  N   0.852   3.805  -17.802  -4.720   0.993  -2.464  HABB  CB9  36  
CB9  HOAG  HOAG  H  0  0  N  N  N   0.931   7.031  -17.147  -6.223   2.274   1.455  HOAG  CB9  37  
CB9  HOAH  HOAH  H  0  0  N  N  N  10.607   0.628  -15.435   3.256   3.278  -1.991  HOAH  CB9  38  
CB9  HAJ   HAJ   H  0  1  N  N  N   4.136  -0.595  -13.349   7.684  -0.435   1.471  HAJ   CB9  39  
CB9  HAK   HAK   H  0  1  N  N  N   4.199  -1.286  -15.724   7.188  -1.513  -0.686  HAK   CB9  40  
CB9  HAL   HAL   H  0  1  N  N  N   5.772   1.049  -12.496   5.969   0.936   2.586  HAL   CB9  41  
CB9  HAM   HAM   H  0  1  N  N  N   5.914  -0.338  -17.226   4.973  -1.227  -1.725  HAM   CB9  42  
CB9  HAN   HAN   H  0  1  N  N  N   7.489   2.005  -13.999   3.755   1.222   1.547  HAN   CB9  43  
CB9  HNAP  HNAP  H  0  0  N  N  N   4.564   6.312  -17.644  -2.823  -1.592   1.457  HNAP  CB9  44  
CB9  HAX   HAX   H  0  1  N  N  N   3.923   4.792  -16.097  -4.961  -1.058   1.081  HAX   CB9  45  
CB9  HAY   HAY   H  0  1  N  N  N   7.913   0.629  -17.438   2.840  -0.357  -1.731  HAY   CB9  46  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
CB9  C    O     DOUB  N  N   1  
CB9  C    CA    SING  N  N   2  
CB9  N    CA    SING  N  N   3  
CB9  N    CAT   SING  N  N   4  
CB9  CA   CB    SING  N  N   5  
CB9  CB   NAP   SING  N  N   6  
CB9  CB   SAQ   SING  N  N   7  
CB9  CAA  CAZ   SING  N  N   8  
CB9  CAB  CAZ   SING  N  N   9  
CB9  OAD  CAR   DOUB  N  N  10  
CB9  OAE  CAS   DOUB  N  N  11  
CB9  OAF  CAT   DOUB  N  N  12  
CB9  OAG  CAR   SING  N  N  13  
CB9  OAH  CAS   SING  N  N  14  
CB9  CAJ  CAK   DOUB  Y  N  15  
CB9  CAJ  CAL   SING  Y  N  16  
CB9  CAK  CAM   SING  Y  N  17  
CB9  CAL  CAN   DOUB  Y  N  18  
CB9  CAM  CAU   DOUB  Y  N  19  
CB9  CAN  CAU   SING  Y  N  20  
CB9  NAP  CAX   SING  N  N  21  
CB9  SAQ  CAZ   SING  N  N  22  
CB9  CAR  CAX   SING  N  N  23  
CB9  CAS  CAY   SING  N  N  24  
CB9  CAT  CAY   SING  N  N  25  
CB9  CAU  CAY   SING  N  N  26  
CB9  CAX  CAZ   SING  N  N  27  
CB9  C    H     SING  N  N  28  
CB9  N    HN    SING  N  N  29  
CB9  CA   HA    SING  N  N  30  
CB9  CB   HB    SING  N  N  31  
CB9  CAA  HAA   SING  N  N  32  
CB9  CAA  HAAA  SING  N  N  33  
CB9  CAA  HAAB  SING  N  N  34  
CB9  CAB  HAB   SING  N  N  35  
CB9  CAB  HABA  SING  N  N  36  
CB9  CAB  HABB  SING  N  N  37  
CB9  OAG  HOAG  SING  N  N  38  
CB9  OAH  HOAH  SING  N  N  39  
CB9  CAJ  HAJ   SING  N  N  40  
CB9  CAK  HAK   SING  N  N  41  
CB9  CAL  HAL   SING  N  N  42  
CB9  CAM  HAM   SING  N  N  43  
CB9  CAN  HAN   SING  N  N  44  
CB9  NAP  HNAP  SING  N  N  45  
CB9  CAX  HAX   SING  N  N  46  
CB9  CAY  HAY   SING  N  N  47  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
CB9  SMILES            ACDLabs               12.01  "O=C(NC(C=O)C1SC(C(N1)C(=O)O)(C)C)C(c2ccccc2)C(=O)O"  
CB9  InChI             InChI                 1.03   "InChI=1S/C17H20N2O6S/c1-17(2)12(16(24)25)19-14(26-17)10(8-20)18-13(21)11(15(22)23)9-6-4-3-5-7-9/h3-8,10-12,14,19H,1-2H3,(H,18,21)(H,22,23)(H,24,25)/t10-,11+,12+,14-/m1/s1"  
CB9  InChIKey          InChI                 1.03   YABPSSAFCROUQF-OWTLIXCDSA-N  
CB9  SMILES_CANONICAL  CACTVS                3.370  "CC1(C)S[C@@H](N[C@H]1C(O)=O)[C@H](NC(=O)[C@@H](C(O)=O)c2ccccc2)C=O"  
CB9  SMILES            CACTVS                3.370  "CC1(C)S[CH](N[CH]1C(O)=O)[CH](NC(=O)[CH](C(O)=O)c2ccccc2)C=O"  
CB9  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.6  "CC1([C@@H](N[C@H](S1)[C@@H](C=O)NC(=O)[C@H](c2ccccc2)C(=O)O)C(=O)O)C"  
CB9  SMILES            "OpenEye OEToolkits"  1.7.6  "CC1(C(NC(S1)C(C=O)NC(=O)C(c2ccccc2)C(=O)O)C(=O)O)C"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
CB9  "SYSTEMATIC NAME"  ACDLabs               12.01  "(2R,4S)-2-[(1R)-1-{[(2S)-2-carboxy-2-phenylacetyl]amino}-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid"  
CB9  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.6  "(2R,4S)-5,5-dimethyl-2-[(1R)-2-oxidanylidene-1-[[(2S)-3-oxidanyl-3-oxidanylidene-2-phenyl-propanoyl]amino]ethyl]-1,3-thiazolidine-4-carboxylic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
CB9  "Create component"      2010-10-12  PDBJ  
CB9  "Modify aromatic_flag"  2011-06-04  RCSB  
CB9  "Modify descriptor"     2011-06-04  RCSB  
CB9  "Modify synonyms"       2012-05-09  PDBJ  
CB9  "Modify synonyms"       2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     CB9
_pdbx_chem_comp_synonyms.name        "Bound form of Carbenicillin"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
