data_CR9
#

_chem_comp.id                                   CR9
_chem_comp.name                                 "2-{5-[AMINO(IMINIO)METHYL]-6-FLUORO-1H-BENZIMIDAZOL-2-YL}-6-[(2-METHYLCYCLOHEXYL)OXY]BENZENOLATE"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C21 H23 F N4 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        CRA_11092
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2003-03-14
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       382.431
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    CR9
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1O2R
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
CR9  C1      C1      C   0  1  Y  N  N  43.903  -3.169  25.814  -5.345  -0.524   0.184  C1      CR9   1  
CR9  C2      C2      C   0  1  Y  N  N  43.839  -1.762  25.662  -5.508   0.631  -0.594  C2      CR9   2  
CR9  F2      F2      F   0  1  N  N  N  43.935  -1.180  24.420  -6.740   0.989  -1.019  F2      CR9   3  
CR9  C3      C3      C   0  1  Y  N  N  43.649  -0.939  26.768  -4.416   1.403  -0.929  C3      CR9   4  
CR9  C4      C4      C   0  1  Y  N  N  43.514  -1.532  28.006  -3.148   1.039  -0.495  C4      CR9   5  
CR9  C5      C5      C   0  1  Y  N  N  43.569  -2.863  28.186  -2.973  -0.119   0.288  C5      CR9   6  
CR9  C6      C6      C   0  1  Y  N  N  43.767  -3.718  27.095  -4.079  -0.898   0.625  C6      CR9   7  
CR9  C7      C7      C   0  1  N  N  N  44.107  -4.007  24.708  -6.521  -1.345   0.538  C7      CR9   8  
CR9  N1      N1      N   0  1  N  N  N  43.687  -5.255  24.711  -7.537  -0.801   1.208  N1      CR9   9  
CR9  N2      N2      N   1  1  N  N  N  44.742  -3.508  23.668  -6.565  -2.631   0.188  N2      CR9  10  
CR9  N3      N3      N   0  1  Y  N  N  43.337  -1.043  29.181  -1.892   1.586  -0.658  N3      CR9  11  
CR9  N4      N4      N   0  1  Y  N  N  43.428  -3.225  29.450  -1.647  -0.225   0.555  N4      CR9  12  
CR9  C8      C8      C   0  1  Y  N  N  43.289  -2.036  30.017  -1.007   0.779   0.006  C8      CR9  13  
CR9  "C1'"   "C1'"   C   0  1  Y  N  N  43.042  -1.840  31.398   0.451   1.002   0.086  "C1'"   CR9  14  
CR9  "C2'"   "C2'"   C   0  1  Y  N  N  42.888  -2.947  32.242   0.955   2.293   0.256  "C2'"   CR9  15  
CR9  "C3'"   "C3'"   C   0  1  Y  N  N  42.641  -2.779  33.607   2.316   2.498   0.331  "C3'"   CR9  16  
CR9  "C4'"   "C4'"   C   0  1  Y  N  N  42.549  -1.514  34.142   3.190   1.429   0.239  "C4'"   CR9  17  
CR9  "C5'"   "C5'"   C   0  1  Y  N  N  42.695  -0.375  33.348   2.705   0.142   0.070  "C5'"   CR9  18  
CR9  "C6'"   "C6'"   C   0  1  Y  N  N  42.947  -0.540  31.959   1.334  -0.078  -0.013  "C6'"   CR9  19  
CR9  "O6'"   "O6'"   O  -1  1  N  N  N  43.096   0.559  31.123   0.855  -1.339  -0.179  "O6'"   CR9  20  
CR9  "O5'"   "O5'"   O   0  1  N  N  N  42.577   0.877  33.960   3.569  -0.904  -0.020  "O5'"   CR9  21  
CR9  C1B     "C1''"  C   0  1  N  N  S  42.488   2.505  35.822   5.842  -1.358  -0.703  C1B     CR9  22  
CR9  C2B     "C2''"  C   0  1  N  N  N  43.153   2.944  37.192   7.252  -0.765  -0.748  C2B     CR9  23  
CR9  C3B     "C3''"  C   0  1  N  N  N  44.658   3.124  37.036   7.719  -0.452   0.675  C3B     CR9  24  
CR9  C4B     "C4''"  C   0  1  N  N  N  45.258   1.844  36.380   6.762   0.555   1.316  C4B     CR9  25  
CR9  C5B     "C5''"  C   0  1  N  N  N  44.632   1.595  34.973   5.353  -0.037   1.361  C5B     CR9  26  
CR9  C6B     "C6''"  C   0  1  N  N  S  43.161   1.236  35.230   4.885  -0.351  -0.062  C6B     CR9  27  
CR9  C1A     C1A     C   0  1  N  N  N  41.050   2.180  36.136   5.375  -1.671  -2.125  C1A     CR9  28  
CR9  HC3     HC3     H   0  1  N  N  N  43.605   0.137  26.674  -4.547   2.291  -1.529  HC3     CR9  29  
CR9  HC6     HC6     H   0  1  N  N  N  43.810  -4.785  27.241  -3.955  -1.787   1.225  HC6     CR9  30  
CR9  HH11    HH11    H   0  0  N  N  N  43.262  -5.600  25.565  -7.505   0.135   1.462  HH11    CR9  31  
CR9  HH12    HH12    H   0  0  N  N  N  43.782  -5.917  23.971  -8.309  -1.340   1.440  HH12    CR9  32  
CR9  HH21    HH21    H   0  0  N  N  N  45.119  -2.576  23.701  -7.291  -3.194   0.500  HH21    CR9  33  
CR9  HH22    HH22    H   0  0  N  N  N  44.918  -4.031  22.840  -5.872  -3.004  -0.378  HH22    CR9  34  
CR9  HN3     HN3     H   0  1  N  N  N  43.245  -0.098  29.467  -1.676   2.393  -1.151  HN3     CR9  35  
CR9  "HC2'"  "HC2'"  H   0  0  N  N  N  42.959  -3.947  31.841   0.278   3.132   0.329  "HC2'"  CR9  36  
CR9  "HC3'"  "HC3'"  H   0  0  N  N  N  42.522  -3.640  34.252   2.703   3.498   0.463  "HC3'"  CR9  37  
CR9  "HC4'"  "HC4'"  H   0  0  N  N  N  42.360  -1.414  35.200   4.255   1.598   0.300  "HC4'"  CR9  38  
CR9  H1B     H1B     H   0  1  N  N  N  42.554   3.324  35.122   5.852  -2.275  -0.114  H1B     CR9  39  
CR9  H2A     H2A     H   0  1  N  N  N  42.749   3.889  37.526   7.933  -1.483  -1.204  H2A     CR9  40  
CR9  H2B     H2B     H   0  1  N  N  N  42.965   2.206  37.962   7.241   0.152  -1.337  H2B     CR9  41  
CR9  H3A     H3A     H   0  1  N  N  N  45.103   3.262  38.015   7.729  -1.369   1.264  H3A     CR9  42  
CR9  H3B     H3B     H   0  1  N  N  N  44.874   3.994  36.439   8.723  -0.029   0.643  H3B     CR9  43  
CR9  H4A     H4A     H   0  1  N  N  N  46.333   1.927  36.301   7.095   0.779   2.330  H4A     CR9  44  
CR9  H4B     H4B     H   0  1  N  N  N  45.052   1.006  37.025   6.752   1.472   0.727  H4B     CR9  45  
CR9  H5A     H5A     H   0  1  N  N  N  45.140   0.769  34.493   5.363  -0.954   1.950  H5A     CR9  46  
CR9  H5B     H5B     H   0  1  N  N  N  44.724   2.479  34.362   4.671   0.680   1.818  H5B     CR9  47  
CR9  H6B     "H6''"  H   0  1  N  N  N  43.071   0.418  35.932   4.875   0.566  -0.651  H6B     CR9  48  
CR9  H1AA    H1AA    H   0  0  N  N  N  40.528   1.830  35.261   6.056  -2.389  -2.582  H1AA    CR9  49  
CR9  H1AB    H1AB    H   0  0  N  N  N  41.003   1.426  36.912   4.370  -2.094  -2.093  H1AB    CR9  50  
CR9  H1AC    H1AC    H   0  0  N  N  N  40.568   3.078  36.501   5.364  -0.754  -2.715  H1AC    CR9  51  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
CR9  C1     C2      DOUB  Y  N   1  
CR9  C1     C6      SING  Y  N   2  
CR9  C1     C7      SING  N  N   3  
CR9  C2     F2      SING  N  N   4  
CR9  C2     C3      SING  Y  N   5  
CR9  C3     C4      DOUB  Y  N   6  
CR9  C3     HC3     SING  N  N   7  
CR9  C4     C5      SING  Y  N   8  
CR9  C4     N3      SING  Y  N   9  
CR9  C5     C6      DOUB  Y  N  10  
CR9  C5     N4      SING  Y  N  11  
CR9  C6     HC6     SING  N  N  12  
CR9  C7     N1      SING  N  N  13  
CR9  C7     N2      DOUB  N  N  14  
CR9  N1     HH11    SING  N  N  15  
CR9  N1     HH12    SING  N  N  16  
CR9  N2     HH21    SING  N  N  17  
CR9  N2     HH22    SING  N  N  18  
CR9  N3     C8      SING  Y  N  19  
CR9  N3     HN3     SING  N  N  20  
CR9  N4     C8      DOUB  Y  N  21  
CR9  C8     "C1'"   SING  Y  N  22  
CR9  "C1'"  "C2'"   DOUB  Y  N  23  
CR9  "C1'"  "C6'"   SING  Y  N  24  
CR9  "C2'"  "C3'"   SING  Y  N  25  
CR9  "C2'"  "HC2'"  SING  N  N  26  
CR9  "C3'"  "C4'"   DOUB  Y  N  27  
CR9  "C3'"  "HC3'"  SING  N  N  28  
CR9  "C4'"  "C5'"   SING  Y  N  29  
CR9  "C4'"  "HC4'"  SING  N  N  30  
CR9  "C5'"  "C6'"   DOUB  Y  N  31  
CR9  "C5'"  "O5'"   SING  N  N  32  
CR9  "C6'"  "O6'"   SING  N  N  33  
CR9  "O5'"  C6B     SING  N  N  34  
CR9  C1B    C2B     SING  N  N  35  
CR9  C1B    C6B     SING  N  N  36  
CR9  C1B    C1A     SING  N  N  37  
CR9  C1B    H1B     SING  N  N  38  
CR9  C2B    C3B     SING  N  N  39  
CR9  C2B    H2A     SING  N  N  40  
CR9  C2B    H2B     SING  N  N  41  
CR9  C3B    C4B     SING  N  N  42  
CR9  C3B    H3A     SING  N  N  43  
CR9  C3B    H3B     SING  N  N  44  
CR9  C4B    C5B     SING  N  N  45  
CR9  C4B    H4A     SING  N  N  46  
CR9  C4B    H4B     SING  N  N  47  
CR9  C5B    C6B     SING  N  N  48  
CR9  C5B    H5A     SING  N  N  49  
CR9  C5B    H5B     SING  N  N  50  
CR9  C6B    H6B     SING  N  N  51  
CR9  C1A    H1AA    SING  N  N  52  
CR9  C1A    H1AB    SING  N  N  53  
CR9  C1A    H1AC    SING  N  N  54  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
CR9  SMILES            ACDLabs               10.04  "[O-]c4c(OC1CCCCC1C)cccc4c3nc2cc(c(F)cc2n3)\C(=[NH2+])N"  
CR9  SMILES_CANONICAL  CACTVS                3.341  "C[C@H]1CCCC[C@@H]1Oc2cccc(c2[O-])c3[nH]c4cc(F)c(cc4n3)C(N)=[NH2+]"  
CR9  SMILES            CACTVS                3.341  "C[CH]1CCCC[CH]1Oc2cccc(c2[O-])c3[nH]c4cc(F)c(cc4n3)C(N)=[NH2+]"  
CR9  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "C[C@H]1CCCC[C@@H]1Oc2cccc(c2[O-])c3[nH]c4cc(c(cc4n3)C(=[NH2+])N)F"  
CR9  SMILES            "OpenEye OEToolkits"  1.5.0  "CC1CCCCC1Oc2cccc(c2[O-])c3[nH]c4cc(c(cc4n3)C(=[NH2+])N)F"  
CR9  InChI             InChI                 1.03   "InChI=1S/C21H23FN4O2/c1-11-5-2-3-7-17(11)28-18-8-4-6-12(19(18)27)21-25-15-9-13(20(23)24)14(22)10-16(15)26-21/h4,6,8-11,17,27H,2-3,5,7H2,1H3,(H3,23,24)(H,25,26)/t11-,17-/m0/s1"  
CR9  InChIKey          InChI                 1.03   CMCDWLMEDRBWIR-GTNSWQLSSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
CR9  "SYSTEMATIC NAME"  ACDLabs               10.04  "2-{5-[amino(iminio)methyl]-6-fluoro-1H-benzimidazol-2-yl}-6-{[(1S,2S)-2-methylcyclohexyl]oxy}phenolate"  
CR9  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "2-[5-(amino-azaniumylidene-methyl)-6-fluoro-1H-benzimidazol-2-yl]-6-[(1S,2S)-2-methylcyclohexyl]oxy-phenolate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
CR9  "Create component"      2003-03-14  RCSB  
CR9  "Modify aromatic_flag"  2011-06-04  RCSB  
CR9  "Modify descriptor"     2011-06-04  RCSB  
CR9  "Modify synonyms"       2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     CR9
_pdbx_chem_comp_synonyms.name        CRA_11092
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
