data_D2T
# 
_chem_comp.id                                    D2T 
_chem_comp.name                                  "(3R)-3-(methylsulfanyl)-L-aspartic acid" 
_chem_comp.type                                  "L-peptide linking" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C5 H9 N O4 S" 
_chem_comp.mon_nstd_parent_comp_id               ASP 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-03-02 
_chem_comp.pdbx_modified_date                    2015-03-13 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        179.194 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     D2T 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4YBB 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
D2T N   N1  N 0 1 N N N -97.656  16.767 -39.009 1.049  2.113  -0.067 N   D2T 1  
D2T CA  C1  C 0 1 N N R -98.427  16.428 -37.793 0.911  0.716  0.366  CA  D2T 2  
D2T C   C2  C 0 1 N N N -98.271  14.914 -37.482 2.125  -0.066 -0.064 C   D2T 3  
D2T O   O1  O 0 1 N N N -99.019  14.303 -36.742 2.830  0.352  -0.952 O   D2T 4  
D2T CB  C3  C 0 1 N N R -99.933  16.834 -37.869 -0.340 0.106  -0.271 CB  D2T 5  
D2T CB1 C4  C 0 1 N N N -99.557  19.276 -36.426 -2.003 -2.172 -0.591 CB1 D2T 6  
D2T SB  S1  S 0 1 N N N -99.945  18.666 -38.090 -0.593 -1.569 0.377  SB  D2T 7  
D2T CG  C5  C 0 1 N N N -100.604 16.053 -39.026 -1.538 0.959  0.058  CG  D2T 8  
D2T OD1 O2  O 0 1 N N N -99.862  15.422 -39.795 -1.569 1.582  1.093  OD1 D2T 9  
D2T OD2 O3  O 0 1 N N N -101.849 16.118 -39.098 -2.569 1.026  -0.798 OD2 D2T 10 
D2T O1  O4  O 0 1 N Y N -97.235  14.345 -38.080 2.425  -1.227 0.540  O1  D2T 11 
D2T H1  H1  H 0 1 N N N -96.705  16.481 -38.892 1.832  2.557  0.390  H1  D2T 12 
D2T H2  H2  H 0 1 N N N -98.052  16.295 -39.797 1.135  2.173  -1.071 H2  D2T 13 
D2T H4  H4  H 0 1 N N N -97.988  16.979 -36.948 0.820  0.679  1.452  H4  D2T 14 
D2T H5  H5  H 0 1 N N N -100.436 16.619 -36.915 -0.211 0.061  -1.353 H5  D2T 15 
D2T H6  H6  H 0 1 N N N -99.536  20.376 -36.434 -1.745 -2.168 -1.650 H6  D2T 16 
D2T H7  H7  H 0 1 N N N -100.326 18.929 -35.720 -2.249 -3.188 -0.281 H7  D2T 17 
D2T H8  H8  H 0 1 N N N -98.574  18.893 -36.115 -2.863 -1.524 -0.423 H8  D2T 18 
D2T H9  H9  H 0 1 N N N -102.151 15.606 -39.839 -3.315 1.586  -0.543 H9  D2T 19 
D2T H10 H10 H 0 1 N N N -97.192  13.428 -37.835 3.214  -1.693 0.231  H10 D2T 20 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
D2T OD1 CG  DOUB N N 1  
D2T OD2 CG  SING N N 2  
D2T CG  CB  SING N N 3  
D2T N   CA  SING N N 4  
D2T SB  CB  SING N N 5  
D2T SB  CB1 SING N N 6  
D2T CB  CA  SING N N 7  
D2T CA  C   SING N N 8  
D2T C   O   DOUB N N 9  
D2T C   O1  SING N N 10 
D2T N   H1  SING N N 11 
D2T N   H2  SING N N 12 
D2T CA  H4  SING N N 13 
D2T CB  H5  SING N N 14 
D2T CB1 H6  SING N N 15 
D2T CB1 H7  SING N N 16 
D2T CB1 H8  SING N N 17 
D2T OD2 H9  SING N N 18 
D2T O1  H10 SING N N 19 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
D2T SMILES           ACDLabs              12.01 "NC(C(=O)O)C(SC)C(=O)O"                                                                 
D2T InChI            InChI                1.03  "InChI=1S/C5H9NO4S/c1-11-3(5(9)10)2(6)4(7)8/h2-3H,6H2,1H3,(H,7,8)(H,9,10)/t2-,3+/m0/s1" 
D2T InChIKey         InChI                1.03  AOSGDBLMPHPJQU-STHAYSLISA-N                                                             
D2T SMILES_CANONICAL CACTVS               3.385 "CS[C@H]([C@H](N)C(O)=O)C(O)=O"                                                         
D2T SMILES           CACTVS               3.385 "CS[CH]([CH](N)C(O)=O)C(O)=O"                                                           
D2T SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "CS[C@H]([C@@H](C(=O)O)N)C(=O)O"                                                        
D2T SMILES           "OpenEye OEToolkits" 1.9.2 "CSC(C(C(=O)O)N)C(=O)O"                                                                 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
D2T "SYSTEMATIC NAME" ACDLabs              12.01 "(3R)-3-(methylsulfanyl)-L-aspartic acid"            
D2T "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "(2R,3R)-2-azanyl-3-methylsulfanyl-butanedioic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
D2T "Create component" 2015-03-02 RCSB 
D2T "Initial release"  2015-03-18 RCSB 
# 
