data_GAF
#

_chem_comp.id                                   GAF
_chem_comp.name                                 2-deoxy-2-fluoro-alpha-D-galactopyranose
_chem_comp.type                                 "D-saccharide, alpha linking"
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C6 H11 F O5"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "2-DEOXY-2-FLUORO-GALACTOSE; 2-deoxy-2-fluoro-alpha-D-galactose; 2-deoxy-2-fluoro-D-galactose"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2004-02-11
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       182.147
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    GAF
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       ?
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  GAF  2-DEOXY-2-FLUORO-GALACTOSE          PDB  ?  
2  GAF  2-deoxy-2-fluoro-alpha-D-galactose  PDB  ?  
3  GAF  2-deoxy-2-fluoro-D-galactose        PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
GAF  C1   C1    C  0  1  N  N  S  119.774  38.094  65.006   1.414  -0.495  -0.365  C1   GAF   1  
GAF  C2   C2    C  0  1  N  N  R  118.893  37.421  63.941   0.373  -0.501  -1.487  C2   GAF   2  
GAF  F2   F2    F  0  1  N  N  N  118.442  36.172  64.360   1.004  -0.255  -2.712  F2   GAF   3  
GAF  C3   C3    C  0  1  N  N  S  119.712  37.262  62.681  -0.664   0.592  -1.213  C3   GAF   4  
GAF  O3   O3    O  0  1  N  N  N  118.875  36.675  61.705  -1.721   0.502  -2.170  O3   GAF   5  
GAF  C4   C4    C  0  1  N  N  R  120.258  38.615  62.202  -1.225   0.390   0.198  C4   GAF   6  
GAF  O4   O4    O  0  1  N  N  N  119.131  39.413  61.888  -1.966  -0.830   0.248  O4   GAF   7  
GAF  C5   C5    C  0  1  N  N  R  121.085  39.248  63.341  -0.064   0.331   1.193  C5   GAF   8  
GAF  O5   O5    O  0  1  N  N  N  120.272  39.336  64.523   0.780  -0.774   0.881  O5   GAF   9  
GAF  C6   C6    C  0  1  N  N  N  121.643  40.654  63.045  -0.616   0.166   2.610  C6   GAF  10  
GAF  O6   O6    O  0  1  N  N  N  120.636  41.605  63.365   0.466   0.113   3.540  O6   GAF  11  
GAF  O1   O1    O  0  1  N  Y  N  120.891  37.228  65.258   2.037   0.789  -0.305  O1   GAF  12  
GAF  H1   H1C1  H  0  1  N  N  N  119.237  38.210  65.976   2.168  -1.255  -0.566  H1   GAF  13  
GAF  H2   H2    H  0  1  N  N  N  118.015  38.074  63.727  -0.120  -1.472  -1.521  H2   GAF  14  
GAF  H3   H3    H  0  1  N  N  N  120.567  36.577  62.887  -0.190   1.571  -1.283  H3   GAF  15  
GAF  HO3  HA    H  0  1  N  Y  N  119.390  36.575  60.913  -1.319   0.621  -3.042  HO3  GAF  16  
GAF  H4   H4    H  0  1  N  N  N  120.894  38.474  61.297  -1.880   1.224   0.453  H4   GAF  17  
GAF  HO4  HB    H  0  1  N  Y  N  119.469  40.250  61.592  -2.681  -0.749  -0.396  HO4  GAF  18  
GAF  H5   H5    H  0  1  N  N  N  121.945  38.573  63.561   0.510   1.255   1.134  H5   GAF  19  
GAF  H61  H6C1  H  0  1  N  N  N  122.017  40.758  62.000  -1.192  -0.757   2.670  H61  GAF  20  
GAF  H62  H6C2  H  0  1  N  N  N  122.606  40.854  63.569  -1.261   1.011   2.850  H62  GAF  21  
GAF  HO6  H6    H  0  1  N  N  N  120.980  42.472  63.183   0.076   0.009   4.419  HO6  GAF  22  
GAF  HO1  H1    H  0  1  N  Y  N  121.435  37.643  65.916   2.688   0.750   0.409  HO1  GAF  23  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
GAF  C1  C2   SING  N  N   1  
GAF  C1  O5   SING  N  N   2  
GAF  C1  O1   SING  N  N   3  
GAF  C1  H1   SING  N  N   4  
GAF  C2  F2   SING  N  N   5  
GAF  C2  C3   SING  N  N   6  
GAF  C2  H2   SING  N  N   7  
GAF  C3  O3   SING  N  N   8  
GAF  C3  C4   SING  N  N   9  
GAF  C3  H3   SING  N  N  10  
GAF  O3  HO3  SING  N  N  11  
GAF  C4  O4   SING  N  N  12  
GAF  C4  C5   SING  N  N  13  
GAF  C4  H4   SING  N  N  14  
GAF  O4  HO4  SING  N  N  15  
GAF  C5  O5   SING  N  N  16  
GAF  C5  C6   SING  N  N  17  
GAF  C5  H5   SING  N  N  18  
GAF  C6  O6   SING  N  N  19  
GAF  C6  H61  SING  N  N  20  
GAF  C6  H62  SING  N  N  21  
GAF  O6  HO6  SING  N  N  22  
GAF  O1  HO1  SING  N  N  23  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
GAF  SMILES            ACDLabs               10.04  "FC1C(O)C(O)C(OC1O)CO"  
GAF  SMILES_CANONICAL  CACTVS                3.341  "OC[C@H]1O[C@H](O)[C@H](F)[C@@H](O)[C@H]1O"  
GAF  SMILES            CACTVS                3.341  "OC[CH]1O[CH](O)[CH](F)[CH](O)[CH]1O"  
GAF  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "C([C@@H]1[C@@H]([C@@H]([C@H]([C@H](O1)O)F)O)O)O"  
GAF  SMILES            "OpenEye OEToolkits"  1.5.0  "C(C1C(C(C(C(O1)O)F)O)O)O"  
GAF  InChI             InChI                 1.03   "InChI=1S/C6H11FO5/c7-3-5(10)4(9)2(1-8)12-6(3)11/h2-6,8-11H,1H2/t2-,3-,4+,5-,6+/m1/s1"  
GAF  InChIKey          InChI                 1.03   ZCXUVYAZINUVJD-DVKNGEFBSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
GAF  "SYSTEMATIC NAME"            ACDLabs               10.04  2-deoxy-2-fluoro-alpha-D-galactopyranose  
GAF  "SYSTEMATIC NAME"            "OpenEye OEToolkits"  1.5.0  "(2S,3R,4S,5R,6R)-3-fluoro-6-(hydroxymethyl)oxane-2,4,5-triol"  
GAF  "IUPAC CARBOHYDRATE SYMBOL"  PDB-CARE              1.0    a-D-Galp2fluoro  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
GAF  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
GAF  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
GAF  "CARBOHYDRATE ANOMER"                  alpha     PDB  ?  
GAF  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
GAF  "Create component"          2004-02-11  EBI   
GAF  "Modify descriptor"         2011-06-04  RCSB  
GAF  "Other modification"        2020-07-03  RCSB  
GAF  "Modify name"               2020-07-17  RCSB  
GAF  "Modify synonyms"           2020-07-17  RCSB  
GAF  "Modify internal type"      2020-07-17  RCSB  
GAF  "Modify linking type"       2020-07-17  RCSB  
GAF  "Modify atom id"            2020-07-17  RCSB  
GAF  "Modify component atom id"  2020-07-17  RCSB  
GAF  "Modify leaving atom flag"  2020-07-17  RCSB  
##
