data_GNG
# 
_chem_comp.id                                    GNG 
_chem_comp.name                                  "2'-DEOXY-GUANOSINE" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C10 H13 N5 O4" 
_chem_comp.mon_nstd_parent_comp_id               G 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2003-02-13 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        267.241 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     GNG 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        1NH3 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
GNG "O5'"  O5*  O 0 1 N N N 117.235 -70.320 -4.555 -1.262 1.538  -4.849 "O5'"  GNG 1  
GNG "C5'"  C5*  C 0 1 N N N 116.006 -70.991 -4.266 -0.776 0.233  -4.528 "C5'"  GNG 2  
GNG "C4'"  C4*  C 0 1 N N R 115.102 -70.124 -3.412 0.245  0.335  -3.394 "C4'"  GNG 3  
GNG "O4'"  O4*  O 0 1 N N N 114.778 -68.883 -4.097 -0.385 0.786  -2.174 "O4'"  GNG 4  
GNG "C1'"  C1*  C 0 1 N N R 113.377 -68.796 -4.376 0.464  0.377  -1.089 "C1'"  GNG 5  
GNG N9     N9   N 0 1 Y N N 113.225 -68.433 -5.786 -0.350 0.036  0.080  N9     GNG 6  
GNG C8     C8   C 0 1 Y N N 114.039 -68.843 -6.815 -1.630 -0.433 0.061  C8     GNG 7  
GNG N7     N7   N 0 1 Y N N 113.634 -68.436 -7.987 -2.041 -0.626 1.281  N7     GNG 8  
GNG C5     C5   C 0 1 Y N N 112.494 -67.700 -7.720 -1.051 -0.292 2.141  C5     GNG 9  
GNG C4     C4   C 0 1 Y N N 112.229 -67.665 -6.360 0.032  0.131  1.382  C4     GNG 10 
GNG N3     N3   N 0 1 N N N 111.217 -67.051 -5.718 1.174  0.534  2.025  N3     GNG 11 
GNG C2     C2   C 0 1 N N N 110.406 -66.418 -6.566 1.248  0.508  3.382  C2     GNG 12 
GNG N1     N1   N 0 1 N N N 110.585 -66.395 -7.931 0.246  0.113  4.137  N1     GNG 13 
GNG C6     C6   C 0 1 N N N 111.618 -67.032 -8.609 -0.914 -0.294 3.601  C6     GNG 14 
GNG O6     O6   O 0 1 N N N 111.674 -66.982 -9.844 -1.837 -0.657 4.314  O6     GNG 15 
GNG N2     N2   N 0 1 N N N 109.332 -65.753 -6.108 2.408  0.913  3.986  N2     GNG 16 
GNG "C2'"  C2*  C 0 1 N N N 112.814 -70.184 -4.125 1.249  -0.861 -1.559 "C2'"  GNG 17 
GNG "C3'"  C3*  C 0 1 N N S 113.760 -70.785 -3.105 0.791  -1.067 -3.024 "C3'"  GNG 18 
GNG "O3'"  O3*  O 0 1 N N N 113.301 -70.489 -1.785 1.895  -1.423 -3.858 "O3'"  GNG 19 
GNG "H5'"  H5*  H 0 1 N N N 117.801 -70.863 -5.090 -1.902 1.430  -5.566 "H5'"  GNG 20 
GNG "H5'1" 1H5* H 0 0 N N N 115.492 -71.328 -5.196 -0.301 -0.203 -5.406 "H5'1" GNG 21 
GNG "H5'2" 2H5* H 0 0 N N N 116.181 -71.987 -3.798 -1.607 -0.396 -4.212 "H5'2" GNG 22 
GNG "H4'"  H4*  H 0 1 N N N 115.673 -69.953 -2.469 1.061  1.002  -3.672 "H4'"  GNG 23 
GNG "H1'"  H1*  H 0 1 N N N 112.851 -68.039 -3.748 1.156  1.181  -0.836 "H1'"  GNG 24 
GNG H8     H8   H 0 1 N N N 114.950 -69.454 -6.708 -2.214 -0.616 -0.828 H8     GNG 25 
GNG HN3    HN3  H 0 1 N N N 111.563 -66.420 -4.994 1.936  0.837  1.508  HN3    GNG 26 
GNG HN21   1HN2 H 0 0 N N N 108.711 -65.268 -6.756 2.480  0.905  4.953  HN21   GNG 27 
GNG HN22   2HN2 H 0 0 N N N 109.644 -65.084 -5.403 3.160  1.203  3.446  HN22   GNG 28 
GNG "H2'1" 1H2* H 0 0 N N N 111.742 -70.195 -3.818 0.991  -1.730 -0.953 "H2'1" GNG 29 
GNG "H2'2" 2H2* H 0 0 N N N 112.682 -70.798 -5.045 2.322  -0.671 -1.519 "H2'2" GNG 30 
GNG "H3'"  H3*  H 0 1 N N N 113.831 -71.896 -3.158 0.003  -1.819 -3.083 "H3'"  GNG 31 
GNG H1     H1   H 0 1 N N N 112.466 -70.900 -1.594 2.244  -2.258 -3.519 H1     GNG 32 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
GNG "O5'" "C5'"  SING N N 1  
GNG "O5'" "H5'"  SING N N 2  
GNG "C5'" "C4'"  SING N N 3  
GNG "C5'" "H5'1" SING N N 4  
GNG "C5'" "H5'2" SING N N 5  
GNG "C4'" "O4'"  SING N N 6  
GNG "C4'" "C3'"  SING N N 7  
GNG "C4'" "H4'"  SING N N 8  
GNG "O4'" "C1'"  SING N N 9  
GNG "C1'" N9     SING N N 10 
GNG "C1'" "C2'"  SING N N 11 
GNG "C1'" "H1'"  SING N N 12 
GNG N9    C8     SING Y N 13 
GNG N9    C4     SING Y N 14 
GNG C8    N7     DOUB Y N 15 
GNG C8    H8     SING N N 16 
GNG N7    C5     SING Y N 17 
GNG C5    C4     DOUB Y N 18 
GNG C5    C6     SING N N 19 
GNG C4    N3     SING N N 20 
GNG N3    C2     SING N N 21 
GNG N3    HN3    SING N N 22 
GNG C2    N1     DOUB N N 23 
GNG C2    N2     SING N N 24 
GNG N1    C6     SING N N 25 
GNG C6    O6     DOUB N N 26 
GNG N2    HN21   SING N N 27 
GNG N2    HN22   SING N N 28 
GNG "C2'" "C3'"  SING N N 29 
GNG "C2'" "H2'1" SING N N 30 
GNG "C2'" "H2'2" SING N N 31 
GNG "C3'" "O3'"  SING N N 32 
GNG "C3'" "H3'"  SING N N 33 
GNG "O3'" H1     SING N N 34 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
GNG SMILES           ACDLabs              10.04 "O=C3N=C(N)Nc1c3ncn1C2OC(C(O)C2)CO"                                                                                              
GNG SMILES_CANONICAL CACTVS               3.341 "NC1=NC(=O)c2ncn([C@H]3C[C@H](O)[C@@H](CO)O3)c2N1"                                                                               
GNG SMILES           CACTVS               3.341 "NC1=NC(=O)c2ncn([CH]3C[CH](O)[CH](CO)O3)c2N1"                                                                                   
GNG SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1nc2c(n1[C@H]3C[C@@H]([C@H](O3)CO)O)NC(=NC2=O)N"                                                                               
GNG SMILES           "OpenEye OEToolkits" 1.5.0 "c1nc2c(n1C3CC(C(O3)CO)O)NC(=NC2=O)N"                                                                                            
GNG InChI            InChI                1.03  "InChI=1S/C10H13N5O4/c11-10-13-8-7(9(18)14-10)12-3-15(8)6-1-4(17)5(2-16)19-6/h3-6,16-17H,1-2H2,(H3,11,13,14,18)/t4-,5+,6+/m0/s1" 
GNG InChIKey         InChI                1.03  YKBGVTZYEHREMT-KVQBGUIXSA-N                                                                                                      
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
GNG "SYSTEMATIC NAME" ACDLabs              10.04 "2'-deoxyguanosine"                                                            
GNG "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "2-amino-9-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-3H-purin-6-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
GNG "Create component"  2003-02-13 RCSB 
GNG "Modify descriptor" 2011-06-04 RCSB 
# 
