data_J4D
#

_chem_comp.id                                   J4D
_chem_comp.name                                 "1-[3-nitro-2-oxidanyl-5-[oxidanyl(oxidanylidene)-$l^{4}-azanyl]sulfonyl-phenyl]-3-[2,3,4,5,6-pentakis(fluoranyl)phenyl]urea"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C13 H6 F5 N4 O8 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2018-08-09
_chem_comp.pdbx_modified_date                   2018-11-23
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       473.266
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    J4D
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  Y
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  Y
_chem_comp.pdbx_model_coordinates_db_code       6ECZ
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
J4D  C13  C1   C  0  1  Y  N  N  -0.951   8.630  13.693  ?  ?  ?  C13  J4D   1  
J4D  C15  C2   C  0  1  Y  N  N   1.153   8.184  12.549  ?  ?  ?  C15  J4D   2  
J4D  C17  C3   C  0  1  Y  N  N  -0.781   6.798  12.140  ?  ?  ?  C17  J4D   3  
J4D  C01  C4   C  0  1  Y  N  N  -4.986   1.161  13.865  ?  ?  ?  C01  J4D   4  
J4D  C02  C5   C  0  1  Y  N  N  -4.725   1.752  12.645  ?  ?  ?  C02  J4D   5  
J4D  C03  C6   C  0  1  Y  N  N  -4.650   3.138  12.585  ?  ?  ?  C03  J4D   6  
J4D  C04  C7   C  0  1  Y  N  N  -4.846   3.917  13.736  ?  ?  ?  C04  J4D   7  
J4D  C05  C8   C  0  1  Y  N  N  -5.114   3.309  14.955  ?  ?  ?  C05  J4D   8  
J4D  C06  C9   C  0  1  Y  N  N  -5.183   1.923  15.003  ?  ?  ?  C06  J4D   9  
J4D  O07  O1   O  0  1  N  N  N  -4.375   3.743  11.355  ?  ?  ?  O07  J4D  10  
J4D  N08  N1   N  0  1  N  N  N  -4.735   5.362  13.628  ?  ?  ?  N08  J4D  11  
J4D  C09  C10  C  0  1  N  N  N  -3.359   5.801  13.427  ?  ?  ?  C09  J4D  12  
J4D  N10  N2   N  0  1  N  N  N  -2.952   7.197  13.272  ?  ?  ?  N10  J4D  13  
J4D  O11  O2   O  0  1  N  N  N  -2.527   4.953  13.387  ?  ?  ?  O11  J4D  14  
J4D  C12  C11  C  0  1  Y  N  N  -1.546   7.547  13.047  ?  ?  ?  C12  J4D  15  
J4D  C14  C12  C  0  1  Y  N  N   0.390   8.948  13.449  ?  ?  ?  C14  J4D  16  
J4D  C16  C13  C  0  1  Y  N  N   0.558   7.101  11.895  ?  ?  ?  C16  J4D  17  
J4D  F18  F1   F  0  1  N  N  N  -1.325   5.727  11.481  ?  ?  ?  F18  J4D  18  
J4D  F19  F2   F  0  1  N  N  N   1.272   6.328  11.007  ?  ?  ?  F19  J4D  19  
J4D  F20  F3   F  0  1  N  N  N   2.476   8.489  12.308  ?  ?  ?  F20  J4D  20  
J4D  F21  F4   F  0  1  N  N  N   0.954  10.017  14.103  ?  ?  ?  F21  J4D  21  
J4D  F22  F5   F  0  1  N  N  N  -1.670   9.386  14.574  ?  ?  ?  F22  J4D  22  
J4D  N23  N3   N  0  1  N  N  N  -4.547   0.881  11.476  ?  ?  ?  N23  J4D  23  
J4D  O24  O3   O  0  1  N  N  N  -4.872   1.233  10.396  ?  ?  ?  O24  J4D  24  
J4D  O25  O4   O  0  1  N  N  N  -4.017  -0.413  11.650  ?  ?  ?  O25  J4D  25  
J4D  S26  S1   S  0  1  N  N  N  -5.545   1.011  16.524  ?  ?  ?  S26  J4D  26  
J4D  O27  O5   O  0  1  N  N  N  -6.917   1.262  16.939  ?  ?  ?  O27  J4D  27  
J4D  O28  O6   O  0  1  N  N  N  -4.752   1.450  17.671  ?  ?  ?  O28  J4D  28  
J4D  N29  N4   N  0  1  N  N  N  -5.339  -0.657  16.238  ?  ?  ?  N29  J4D  29  
J4D  H1   H1   H  0  1  N  N  N  -5.037   0.084  13.932  ?  ?  ?  H1   J4D  30  
J4D  H2   H2   H  0  1  N  N  N  -5.265   3.901  15.846  ?  ?  ?  H2   J4D  31  
J4D  H3   H3   H  0  1  N  N  N  -4.455   3.100  10.660  ?  ?  ?  H3   J4D  32  
J4D  H4   H4   H  0  1  N  N  N  -5.515   5.985  13.685  ?  ?  ?  H4   J4D  33  
J4D  H5   H5   H  0  1  N  N  N  -3.640   7.921  13.320  ?  ?  ?  H5   J4D  34  
J4D  O1   O7   O  0  1  N  N  N       ?       ?       ?  ?  ?  ?  O1   J4D  35  
J4D  O2   O8   O  0  1  N  N  N       ?       ?       ?  ?  ?  ?  O2   J4D  36  
J4D  H6   H6   H  0  1  N  N  N       ?       ?       ?  ?  ?  ?  H6   J4D  37  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
J4D  O24  N23  DOUB  N  N   1  
J4D  F19  C16  SING  N  N   2  
J4D  O07  C03  SING  N  N   3  
J4D  N23  O25  DOUB  N  N   4  
J4D  N23  C02  SING  N  N   5  
J4D  F18  C17  SING  N  N   6  
J4D  C16  C17  DOUB  Y  N   7  
J4D  C16  C15  SING  Y  N   8  
J4D  C17  C12  SING  Y  N   9  
J4D  F20  C15  SING  N  N  10  
J4D  C15  C14  DOUB  Y  N  11  
J4D  C03  C02  DOUB  Y  N  12  
J4D  C03  C04  SING  Y  N  13  
J4D  C02  C01  SING  Y  N  14  
J4D  C12  N10  SING  N  N  15  
J4D  C12  C13  DOUB  Y  N  16  
J4D  N10  C09  SING  N  N  17  
J4D  O11  C09  DOUB  N  N  18  
J4D  C09  N08  SING  N  N  19  
J4D  C14  C13  SING  Y  N  20  
J4D  C14  F21  SING  N  N  21  
J4D  N08  C04  SING  N  N  22  
J4D  C13  F22  SING  N  N  23  
J4D  C04  C05  DOUB  Y  N  24  
J4D  C01  C06  DOUB  Y  N  25  
J4D  C05  C06  SING  Y  N  26  
J4D  C06  S26  SING  N  N  27  
J4D  N29  S26  SING  N  N  28  
J4D  S26  O27  DOUB  N  N  29  
J4D  S26  O28  DOUB  N  N  30  
J4D  C01  H1   SING  N  N  31  
J4D  C05  H2   SING  N  N  32  
J4D  O07  H3   SING  N  N  33  
J4D  N08  H4   SING  N  N  34  
J4D  N10  H5   SING  N  N  35  
J4D  N29  O1   DOUB  N  N  36  
J4D  N29  O2   SING  N  N  37  
J4D  O2   H6   SING  N  N  38  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
J4D  InChI             InChI                 1.03   "InChI=1S/C13H6F5N4O8S/c14-6-7(15)9(17)11(10(18)8(6)16)20-13(24)19-4-1-3(31(29,30)22(27)28)2-5(12(4)23)21(25)26/h1-2,23H,(H,27,28)(H2,19,20,24)"  
J4D  InChIKey          InChI                 1.03   OTJPTVGRVTVHBI-UHFFFAOYSA-N  
J4D  SMILES_CANONICAL  CACTVS                3.385  "Oc1c(NC(=O)Nc2c(F)c(F)c(F)c(F)c2F)cc(cc1[N](=O)=O)[S](=O)(=O)[N](O)=O"  
J4D  SMILES            CACTVS                3.385  "Oc1c(NC(=O)Nc2c(F)c(F)c(F)c(F)c2F)cc(cc1[N](=O)=O)[S](=O)(=O)[N](O)=O"  
J4D  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "c1c(cc(c(c1NC(=O)Nc2c(c(c(c(c2F)F)F)F)F)O)N(=O)=O)S(=O)(=O)[N](=O)O"  
J4D  SMILES            "OpenEye OEToolkits"  2.0.6  "c1c(cc(c(c1NC(=O)Nc2c(c(c(c(c2F)F)F)F)F)O)N(=O)=O)S(=O)(=O)[N](=O)O"  
#
_pdbx_chem_comp_identifier.comp_id          J4D
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.6
_pdbx_chem_comp_identifier.identifier       "1-[3-nitro-2-oxidanyl-5-[oxidanyl(oxidanylidene)-$l^{4}-azanyl]sulfonyl-phenyl]-3-[2,3,4,5,6-pentakis(fluoranyl)phenyl]urea"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
J4D  "Create component"  2018-08-09  RCSB  
J4D  "Initial release"   2018-11-28  RCSB  
##
