data_KFP
# 
_chem_comp.id                                    KFP 
_chem_comp.name                                  "N~6~-[(2-amino-4-oxo-3,4-dihydropteridin-6-yl)methyl]-D-lysine" 
_chem_comp.type                                  "D-PEPTIDE LINKING" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C13 H19 N7 O3" 
_chem_comp.mon_nstd_parent_comp_id               LYS 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2013-03-25 
_chem_comp.pdbx_modified_date                    2013-04-19 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        321.335 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     KFP 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4IIQ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
KFP O   O   O 0 1 N N N 10.437 -11.019 38.187 8.231  0.297  -1.366 O   KFP 1  
KFP C   C   C 0 1 N N N 11.530 -11.529 37.917 7.563  0.857  -0.529 C   KFP 2  
KFP CA  CA  C 0 1 N N R 12.377 -10.830 36.823 6.561  0.076  0.282  CA  KFP 3  
KFP N   N   N 0 1 N N N 11.916 -11.211 35.442 6.900  -1.352 0.234  N   KFP 4  
KFP CB  CB  C 0 1 N N N 13.931 -10.803 36.971 5.161  0.288  -0.296 CB  KFP 5  
KFP CAI CAI C 0 1 N N N 14.249 -10.073 38.290 4.130  -0.403 0.599  CAI KFP 6  
KFP CAH CAH C 0 1 N N N 15.766 -9.783  38.428 2.729  -0.191 0.021  CAH KFP 7  
KFP CAJ CAJ C 0 1 N N N 16.137 -8.980  39.707 1.698  -0.881 0.916  CAJ KFP 8  
KFP NAL NAL N 0 1 N N N 17.560 -8.539  39.673 0.353  -0.678 0.361  NAL KFP 9  
KFP CAF CAF C 0 1 N N N 18.627 -9.243  39.241 -0.665 -1.329 1.196  CAF KFP 10 
KFP C6  C6  C 0 1 Y N N 19.819 -8.524  39.349 -2.028 -1.099 0.597  C6  KFP 11 
KFP N5  N5  N 0 1 Y N N 20.951 -8.978  38.779 -2.684 0.011  0.871  N5  KFP 12 
KFP C4A C4A C 0 1 Y N N 22.095 -8.261  38.829 -3.884 0.211  0.342  C4A KFP 13 
KFP C4  C4  C 0 1 N N N 23.273 -8.759  38.267 -4.659 1.433  0.615  C4  KFP 14 
KFP O4  O4  O 0 1 N N N 23.310 -9.861  37.716 -4.223 2.308  1.339  O4  KFP 15 
KFP N3  N3  N 0 1 N N N 24.442 -7.981  38.338 -5.873 1.547  0.029  N3  KFP 16 
KFP C2  C2  C 0 1 N N N 24.409 -6.723  38.966 -6.345 0.557  -0.781 C2  KFP 17 
KFP N2  N2  N 0 1 N N N 25.514 -5.971  39.036 -7.580 0.714  -1.354 N2  KFP 18 
KFP N1  N1  N 0 1 N N N 23.254 -6.278  39.498 -5.673 -0.539 -1.038 N1  KFP 19 
KFP C8A C8A C 0 1 Y N N 22.120 -7.006  39.444 -4.455 -0.762 -0.512 C8A KFP 20 
KFP N8  N8  N 0 1 Y N N 20.994 -6.516  39.988 -3.776 -1.879 -0.777 N8  KFP 21 
KFP C7  C7  C 0 1 Y N N 19.807 -7.254  39.925 -2.582 -2.058 -0.246 C7  KFP 22 
KFP H2  H2  H 0 1 N N N 12.093 -9.771  36.915 6.583  0.421  1.316  H2  KFP 23 
KFP H3  H3  H 0 1 N N N 10.916 -11.210 35.412 6.281  -1.890 0.822  H3  KFP 24 
KFP H4  H4  H 0 1 N Y N 12.270 -10.552 34.779 6.886  -1.696 -0.715 H4  KFP 25 
KFP H6  H6  H 0 1 N N N 14.325 -11.830 37.004 4.944  1.355  -0.343 H6  KFP 26 
KFP H7  H7  H 0 1 N N N 14.381 -10.265 36.124 5.113  -0.137 -1.299 H7  KFP 27 
KFP H8  H8  H 0 1 N N N 13.700 -9.120  38.313 4.346  -1.470 0.646  H8  KFP 28 
KFP H9  H9  H 0 1 N N N 13.927 -10.702 39.133 4.177  0.022  1.602  H9  KFP 29 
KFP H10 H10 H 0 1 N N N 16.302 -10.743 38.454 2.513  0.877  -0.026 H10 KFP 30 
KFP H11 H11 H 0 1 N N N 16.090 -9.206  37.550 2.682  -0.615 -0.982 H11 KFP 31 
KFP H12 H12 H 0 1 N N N 15.488 -8.094  39.775 1.914  -1.949 0.963  H12 KFP 32 
KFP H13 H13 H 0 1 N N N 15.980 -9.618  40.589 1.745  -0.457 1.919  H13 KFP 33 
KFP H14 H14 H 0 1 N N N 17.777 -8.302  40.620 0.302  -1.005 -0.592 H14 KFP 34 
KFP H16 H16 H 0 1 N N N 18.470 -9.510  38.186 -0.465 -2.399 1.245  H16 KFP 35 
KFP H17 H17 H 0 1 N N N 18.712 -10.160 39.842 -0.634 -0.907 2.201  H17 KFP 36 
KFP H18 H18 H 0 1 N N N 25.295 -8.321  37.943 -6.411 2.338  0.186  H18 KFP 37 
KFP H19 H19 H 0 1 N N N 25.483 -5.077  39.484 -8.097 1.516  -1.179 H19 KFP 38 
KFP H20 H20 H 0 1 N N N 26.370 -6.303  38.641 -7.937 0.024  -1.934 H20 KFP 39 
KFP H21 H21 H 0 1 N N N 18.889 -6.844  40.319 -2.030 -2.960 -0.464 H21 KFP 40 
KFP OXT OXT O 0 1 N Y N ?      ?       ?      7.717  2.174  -0.318 OXT KFP 41 
KFP HXT HXT H 0 1 N Y N ?      ?       ?      8.374  2.631  -0.860 HXT KFP 42 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
KFP N   CA  SING N N 1  
KFP CA  CB  SING N N 2  
KFP CA  C   SING N N 3  
KFP CB  CAI SING N N 4  
KFP O4  C4  DOUB N N 5  
KFP C   O   DOUB N N 6  
KFP C4  N3  SING N N 7  
KFP C4  C4A SING N N 8  
KFP CAI CAH SING N N 9  
KFP N3  C2  SING N N 10 
KFP CAH CAJ SING N N 11 
KFP N5  C4A DOUB Y N 12 
KFP N5  C6  SING Y N 13 
KFP C4A C8A SING Y N 14 
KFP C2  N2  SING N N 15 
KFP C2  N1  DOUB N N 16 
KFP CAF C6  SING N N 17 
KFP CAF NAL SING N N 18 
KFP C6  C7  DOUB Y N 19 
KFP C8A N1  SING N N 20 
KFP C8A N8  DOUB Y N 21 
KFP NAL CAJ SING N N 22 
KFP C7  N8  SING Y N 23 
KFP CA  H2  SING N N 24 
KFP N   H3  SING N N 25 
KFP N   H4  SING N N 26 
KFP CB  H6  SING N N 27 
KFP CB  H7  SING N N 28 
KFP CAI H8  SING N N 29 
KFP CAI H9  SING N N 30 
KFP CAH H10 SING N N 31 
KFP CAH H11 SING N N 32 
KFP CAJ H12 SING N N 33 
KFP CAJ H13 SING N N 34 
KFP NAL H14 SING N N 35 
KFP CAF H16 SING N N 36 
KFP CAF H17 SING N N 37 
KFP N3  H18 SING N N 38 
KFP N2  H19 SING N N 39 
KFP N2  H20 SING N N 40 
KFP C7  H21 SING N N 41 
KFP C   OXT SING N N 42 
KFP OXT HXT SING N N 43 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
KFP SMILES           ACDLabs              12.01 "O=C(O)C(N)CCCCNCc2nc1c(N=C(N)NC1=O)nc2"                                                                                                         
KFP InChI            InChI                1.03  "InChI=1S/C13H19N7O3/c14-8(12(22)23)3-1-2-4-16-5-7-6-17-10-9(18-7)11(21)20-13(15)19-10/h6,8,16H,1-5,14H2,(H,22,23)(H3,15,17,19,20,21)/t8-/m1/s1" 
KFP InChIKey         InChI                1.03  VSWOPALBOJUOOW-MRVPVSSYSA-N                                                                                                                      
KFP SMILES_CANONICAL CACTVS               3.370 "N[C@H](CCCCNCc1cnc2N=C(N)NC(=O)c2n1)C(O)=O"                                                                                                     
KFP SMILES           CACTVS               3.370 "N[CH](CCCCNCc1cnc2N=C(N)NC(=O)c2n1)C(O)=O"                                                                                                      
KFP SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1c(nc2c(n1)N=C(NC2=O)N)CNCCCC[C@H](C(=O)O)N"                                                                                                   
KFP SMILES           "OpenEye OEToolkits" 1.7.6 "c1c(nc2c(n1)N=C(NC2=O)N)CNCCCCC(C(=O)O)N"                                                                                                       
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
KFP "SYSTEMATIC NAME" ACDLabs              12.01 "N~6~-[(2-amino-4-oxo-3,4-dihydropteridin-6-yl)methyl]-D-lysine"                        
KFP "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2R)-2-azanyl-6-[(2-azanyl-4-oxidanylidene-3H-pteridin-6-yl)methylamino]hexanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
KFP "Create component" 2013-03-25 RCSB 
KFP "Initial release"  2013-04-24 RCSB 
# 
