data_LE1
#

_chem_comp.id                                   LE1
_chem_comp.name                                 3-sulfanyl-L-valine
_chem_comp.type                                 "L-PEPTIDE LINKING"
_chem_comp.pdbx_type                            ATOMP
_chem_comp.formula                              "C5 H11 N O2 S"
_chem_comp.mon_nstd_parent_comp_id              VAL
_chem_comp.pdbx_synonyms                        "L-LE1ICILLAMINE; L-Penicillamine"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2009-05-15
_chem_comp.pdbx_modified_date                   2022-04-27
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       149.211
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    LE1
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       ?
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
LE1  O    O    O  0  1  N  N  N  12.964  -6.029   9.096   2.327  -0.737   0.583  O    LE1   1  
LE1  C    C    C  0  1  N  N  N  11.736  -6.156   9.121   1.707  -0.024  -0.170  C    LE1   2  
LE1  CA   CA   C  0  1  N  N  R  10.865  -4.964   8.835   0.326  -0.422  -0.620  CA   LE1   3  
LE1  N    N    N  0  1  N  N  N   9.630  -5.346   8.129   0.145  -1.867  -0.424  N    LE1   4  
LE1  CB   CB   C  0  1  N  N  N  10.581  -4.166  10.121  -0.717   0.338   0.201  CB   LE1   5  
LE1  C9   C9   C  0  1  N  N  N  11.873  -3.591  10.657  -0.546  -0.001   1.683  C9   LE1   6  
LE1  C8   C8   C  0  1  N  N  N   9.913  -5.026  11.171  -0.529   1.843  -0.003  C8   LE1   7  
LE1  SG   SG   S  0  1  N  N  N   9.476  -2.825   9.724  -2.381  -0.142  -0.340  SG   LE1   8  
LE1  OXT  OXT  O  0  1  N  Y  N  11.148  -7.425   9.420   2.248   1.127  -0.602  O2   LE1   9  
LE1  HA   HA   H  0  1  N  N  N  11.418  -4.299   8.155   0.204  -0.181  -1.676  HA   LE1  10  
LE1  HN   HN   H  0  1  N  N  N   8.882  -5.433   8.787   0.780  -2.393  -1.005  HN   LE1  11  
LE1  HNA  HNA  H  0  1  N  Y  N   9.401  -4.644   7.455   0.253  -2.116   0.548  HNA  LE1  12  
LE1  H9   H9   H  0  1  N  N  N  12.584  -3.451   9.829   0.454   0.288   2.009  H9   LE1  13  
LE1  H9A  H9A  H  0  1  N  N  N  11.672  -2.621  11.135  -1.289   0.541   2.268  H9A  LE1  14  
LE1  H9B  H9B  H  0  1  N  N  N  12.303  -4.283  11.397  -0.680  -1.072   1.829  H9B  LE1  15  
LE1  H8   H8   H  0  1  N  N  N   9.751  -6.037  10.769  -0.651   2.084  -1.059  H8   LE1  16  
LE1  H8A  H8A  H  0  1  N  N  N  10.557  -5.084  12.061  -1.272   2.385   0.582  H8A  LE1  17  
LE1  H8B  H8B  H  0  1  N  N  N   8.945  -4.582  11.447   0.470   2.131   0.322  H8B  LE1  18  
LE1  HSG  HSG  H  0  1  N  N  N   9.207  -2.151  10.802  -3.181   0.592   0.454  HSG  LE1  19  
LE1  HXT  HXT  H  0  1  N  Y  N  11.834  -8.064   9.575   3.135   1.342  -0.282  H11  LE1  20  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
LE1  O    C    DOUB  N  N   1  
LE1  C    OXT  SING  N  N   2  
LE1  CA   C    SING  N  N   3  
LE1  CA   CB   SING  N  N   4  
LE1  CA   HA   SING  N  N   5  
LE1  N    CA   SING  N  N   6  
LE1  N    HN   SING  N  N   7  
LE1  N    HNA  SING  N  N   8  
LE1  CB   C9   SING  N  N   9  
LE1  CB   C8   SING  N  N  10  
LE1  C9   H9   SING  N  N  11  
LE1  C9   H9A  SING  N  N  12  
LE1  C9   H9B  SING  N  N  13  
LE1  C8   H8   SING  N  N  14  
LE1  C8   H8A  SING  N  N  15  
LE1  C8   H8B  SING  N  N  16  
LE1  SG   CB   SING  N  N  17  
LE1  SG   HSG  SING  N  N  18  
LE1  OXT  HXT  SING  N  N  19  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
LE1  SMILES            ACDLabs               10.04  "O=C(O)C(N)C(S)(C)C"  
LE1  SMILES_CANONICAL  CACTVS                3.341  "CC(C)(S)[C@H](N)C(O)=O"  
LE1  SMILES            CACTVS                3.341  "CC(C)(S)[CH](N)C(O)=O"  
LE1  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "CC(C)([C@@H](C(=O)O)N)S"  
LE1  SMILES            "OpenEye OEToolkits"  1.5.0  "CC(C)(C(C(=O)O)N)S"  
LE1  InChI             InChI                 1.03   "InChI=1S/C5H11NO2S/c1-5(2,9)3(6)4(7)8/h3,9H,6H2,1-2H3,(H,7,8)/t3-/m1/s1"  
LE1  InChIKey          InChI                 1.03   VVNCNSJFMMFHPL-GSVOUGTGSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
LE1  "SYSTEMATIC NAME"  ACDLabs               10.04  3-sulfanyl-L-valine  
LE1  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(2R)-2-amino-3-methyl-3-sulfanyl-butanoic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
LE1  "Create component"   2009-05-15  RCSB  
LE1  "Modify descriptor"  2011-06-04  RCSB  
LE1  "Modify synonyms"    2021-03-01  PDBE  
LE1  "Modify synonyms"    2022-04-27  PDBE  
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  LE1  L-LE1ICILLAMINE  ?  ?  
2  LE1  L-Penicillamine  ?  ?  
##
