data_LLO
#

_chem_comp.id                                   LLO
_chem_comp.name                                 "N~6~-[(1S)-3-hydroxy-1,3-dimethylbutyl]-L-lysine"
_chem_comp.type                                 "L-peptide linking"
_chem_comp.pdbx_type                            ATOMP
_chem_comp.formula                              "C12 H26 N2 O3"
_chem_comp.mon_nstd_parent_comp_id              LYS
_chem_comp.pdbx_synonyms                        4-Hydroxy-4-Methyl-2-Pentanone
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2010-07-20
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       246.346
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    LLO
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3NXF
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
LLO  C     C     C  0  1  N  N  N  37.417  -14.161  18.722  -5.318   0.621  -0.073  C     LLO   1  
LLO  N     N     N  0  1  N  N  N  38.015  -15.326  16.647  -4.431  -1.528   0.636  N     LLO   2  
LLO  O     O     O  0  1  N  N  N  36.596  -14.941  19.234  -6.112   0.001  -0.740  O     LLO   3  
LLO  O1    O1    O  0  1  N  N  N  29.378  -12.005  12.225   3.213   1.602  -0.457  O1    LLO   4  
LLO  C8    C8    C  0  1  N  N  N  29.784  -10.071  13.563   4.319   1.010   1.609  C8    LLO   5  
LLO  CA    CA    C  0  1  N  N  S  37.560  -14.053  17.211  -4.147  -0.088   0.558  CA    LLO   6  
LLO  CB    CB    C  0  1  N  N  N  36.239  -13.631  16.553  -2.895   0.139  -0.292  CB    LLO   7  
LLO  CD    CD    C  0  1  N  N  N  35.349  -11.495  15.602  -0.431  -0.248  -0.437  CD    LLO   8  
LLO  CE    CE    C  0  1  N  N  N  35.000  -10.760  14.305   0.781  -0.862   0.267  CE    LLO   9  
LLO  CG    CG    C  0  1  N  N  N  36.400  -12.596  15.432  -1.683  -0.475   0.412  CG    LLO  10  
LLO  NZ    NZ    N  0  1  N  N  N  33.558  -10.645  14.082   1.983  -0.644  -0.548  NZ    LLO  11  
LLO  C11   C11   C  0  1  N  N  N  30.340  -10.966  12.461   4.375   0.967   0.080  C11   LLO  12  
LLO  C12   C12   C  0  1  N  N  N  31.677  -11.646  12.820   4.422  -0.489  -0.387  C12   LLO  13  
LLO  C13   C13   C  0  1  N  N  S  32.928  -10.753  12.764   3.169  -1.222   0.098  C13   LLO  14  
LLO  C14   C14   C  0  1  N  N  N  33.896  -11.221  11.670   3.274  -2.705  -0.261  C14   LLO  15  
LLO  C16   C16   C  0  1  N  N  N  30.430  -10.072  11.222   5.627   1.699  -0.405  C16   LLO  16  
LLO  OXT   OXT   O  0  1  N  Y  N  37.710  -12.933  19.394  -5.474   1.943   0.100  OXT   LLO  17  
LLO  HN    HN    H  0  1  N  N  N  38.104  -15.239  15.655  -5.216  -1.709   1.245  HN    LLO  18  
LLO  HNA   HNA   H  0  1  N  N  N  38.902  -15.567  17.041  -4.588  -1.916  -0.282  HNA   LLO  19  
LLO  HO1   HO1   H  0  1  N  N  N  29.696  -12.582  11.541   3.182   1.612  -1.423  HO1   LLO  20  
LLO  H8    H8    H  0  1  N  N  N  30.497   -9.260  13.772   3.426   0.488   1.954  H8    LLO  21  
LLO  H8A   H8A   H  0  1  N  N  N  28.825   -9.641  13.237   5.205   0.525   2.019  H8A   LLO  22  
LLO  H8B   H8B   H  0  1  N  N  N  29.628  -10.666  14.475   4.285   2.047   1.942  H8B   LLO  23  
LLO  HA    HA    H  0  1  N  N  N  38.311  -13.277  17.002  -3.982   0.305   1.561  HA    LLO  24  
LLO  HB    HB    H  0  1  N  N  N  35.773  -14.529  16.121  -3.026  -0.332  -1.266  HB    LLO  25  
LLO  HBA   HBA   H  0  1  N  N  N  35.598  -13.191  17.331  -2.735   1.209  -0.424  HBA   LLO  26  
LLO  HD    HD    H  0  1  N  N  N  35.744  -10.756  16.315  -0.271   0.822  -0.569  HD    LLO  27  
LLO  HDA   HDA   H  0  1  N  N  N  34.429  -11.960  15.987  -0.562  -0.719  -1.411  HDA   LLO  28  
LLO  HE    HE    H  0  1  N  N  N  35.423   -9.746  14.358   0.912  -0.391   1.242  HE    LLO  29  
LLO  HEA   HEA   H  0  1  N  N  N  35.436  -11.318  13.464   0.621  -1.932   0.400  HEA   LLO  30  
LLO  HG    HG    H  0  1  N  N  N  37.406  -12.154  15.482  -1.552  -0.004   1.387  HG    LLO  31  
LLO  HGA   HGA   H  0  1  N  N  N  36.264  -13.087  14.457  -1.844  -1.545   0.545  HGA   LLO  32  
LLO  HNZ   HNZ   H  0  1  N  N  N  33.153  -11.382  14.623   1.861  -1.016  -1.478  HNZ   LLO  33  
LLO  H12   H12   H  0  1  N  N  N  31.588  -12.020  13.851   4.462  -0.520  -1.476  H12   LLO  34  
LLO  H12A  H12A  H  0  0  N  N  N  31.829  -12.467  12.104   5.308  -0.974   0.023  H12A  LLO  35  
LLO  H13   H13   H  0  1  N  N  N  32.617   -9.735  12.485   3.082  -1.115   1.179  H13   LLO  36  
LLO  H14   H14   H  0  1  N  N  N  33.363  -11.281  10.709   3.362  -2.812  -1.342  H14   LLO  37  
LLO  H14A  H14A  H  0  0  N  N  N  34.726  -10.505  11.584   4.155  -3.134   0.219  H14A  LLO  38  
LLO  H14B  H14B  H  0  0  N  N  N  34.293  -12.213  11.932   2.382  -3.227   0.085  H14B  LLO  39  
LLO  H16   H16   H  0  1  N  N  N  31.166   -9.274  11.398   5.594   2.736  -0.072  H16   LLO  40  
LLO  H16A  H16A  H  0  0  N  N  N  30.743  -10.675  10.357   6.513   1.214   0.005  H16A  LLO  41  
LLO  H16B  H16B  H  0  0  N  N  N  29.445   -9.625  11.021   5.667   1.668  -1.494  H16B  LLO  42  
LLO  HXT   HXT   H  0  1  N  Y  N  37.201  -12.880  20.194  -6.238   2.354  -0.328  HXT   LLO  43  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
LLO  C    O     DOUB  N  N   1  
LLO  N    CA    SING  N  N   2  
LLO  O1   C11   SING  N  N   3  
LLO  CA   C     SING  N  N   4  
LLO  CB   CA    SING  N  N   5  
LLO  CE   CD    SING  N  N   6  
LLO  CG   CB    SING  N  N   7  
LLO  CG   CD    SING  N  N   8  
LLO  NZ   CE    SING  N  N   9  
LLO  C11  C8    SING  N  N  10  
LLO  C11  C12   SING  N  N  11  
LLO  C13  NZ    SING  N  N  12  
LLO  C13  C12   SING  N  N  13  
LLO  C14  C13   SING  N  N  14  
LLO  C16  C11   SING  N  N  15  
LLO  C    OXT   SING  N  N  16  
LLO  N    HN    SING  N  N  17  
LLO  N    HNA   SING  N  N  18  
LLO  O1   HO1   SING  N  N  19  
LLO  C8   H8    SING  N  N  20  
LLO  C8   H8A   SING  N  N  21  
LLO  C8   H8B   SING  N  N  22  
LLO  CA   HA    SING  N  N  23  
LLO  CB   HB    SING  N  N  24  
LLO  CB   HBA   SING  N  N  25  
LLO  CD   HD    SING  N  N  26  
LLO  CD   HDA   SING  N  N  27  
LLO  CE   HE    SING  N  N  28  
LLO  CE   HEA   SING  N  N  29  
LLO  CG   HG    SING  N  N  30  
LLO  CG   HGA   SING  N  N  31  
LLO  NZ   HNZ   SING  N  N  32  
LLO  C12  H12   SING  N  N  33  
LLO  C12  H12A  SING  N  N  34  
LLO  C13  H13   SING  N  N  35  
LLO  C14  H14   SING  N  N  36  
LLO  C14  H14A  SING  N  N  37  
LLO  C14  H14B  SING  N  N  38  
LLO  C16  H16   SING  N  N  39  
LLO  C16  H16A  SING  N  N  40  
LLO  C16  H16B  SING  N  N  41  
LLO  OXT  HXT   SING  N  N  42  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
LLO  SMILES            ACDLabs               12.01  "O=C(O)C(N)CCCCNC(CC(O)(C)C)C"  
LLO  SMILES_CANONICAL  CACTVS                3.370  "C[C@@H](CC(C)(C)O)NCCCC[C@H](N)C(O)=O"  
LLO  SMILES            CACTVS                3.370  "C[CH](CC(C)(C)O)NCCCC[CH](N)C(O)=O"  
LLO  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.0  "C[C@@H](CC(C)(C)O)NCCCC[C@@H](C(=O)O)N"  
LLO  SMILES            "OpenEye OEToolkits"  1.7.0  "CC(CC(C)(C)O)NCCCCC(C(=O)O)N"  
LLO  InChI             InChI                 1.03   "InChI=1S/C12H26N2O3/c1-9(8-12(2,3)17)14-7-5-4-6-10(13)11(15)16/h9-10,14,17H,4-8,13H2,1-3H3,(H,15,16)/t9-,10-/m0/s1"  
LLO  InChIKey          InChI                 1.03   DFHXLOGIWRRFER-UWVGGRQHSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
LLO  "SYSTEMATIC NAME"  ACDLabs               12.01  "N~6~-[(2S)-4-hydroxy-4-methylpentan-2-yl]-L-lysine"  
LLO  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.0  "(2S)-2-azanyl-6-[[(2S)-4-hydroxy-4-methyl-pentan-2-yl]amino]hexanoic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
LLO  "Create component"   2010-07-20  RCSB  
LLO  "Modify descriptor"  2011-06-04  RCSB  
LLO  "Modify synonyms"    2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     LLO
_pdbx_chem_comp_synonyms.name        4-Hydroxy-4-Methyl-2-Pentanone
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
