data_N1L
#

_chem_comp.id                                   N1L
_chem_comp.name                                 "2-amino-2-deoxy-beta-D-glucopyranuronic acid"
_chem_comp.type                                 "D-saccharide, beta linking"
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C6 H11 N O6"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "2-amino-2-deoxy-beta-D-glucuronic acid; 2-amino-2-deoxy-D-glucuronic acid; 2-amino-2-deoxy-glucuronic acid"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2008-03-11
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       193.155
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    N1L
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       2WDX
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  N1L  "2-amino-2-deoxy-beta-D-glucuronic acid"  PDB  ?  
2  N1L  "2-amino-2-deoxy-D-glucuronic acid"       PDB  ?  
3  N1L  "2-amino-2-deoxy-glucuronic acid"         PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
N1L  C1    C1    C  0  1  N  N  R  15.736  20.127  42.187  -1.267   1.259   0.389  C1    N1L   1  
N1L  C2    C2    C  0  1  N  N  R  15.741  19.296  43.508  -1.870   0.006  -0.252  C2    N1L   2  
N1L  C3    C3    C  0  1  N  N  R  17.021  18.397  43.472  -1.055  -1.219   0.176  C3    N1L   3  
N1L  C4    C4    C  0  1  N  N  S  17.113  17.531  42.174   0.409  -1.010  -0.222  C4    N1L   4  
N1L  C5    C5    C  0  1  N  N  S  17.006  18.440  40.913   0.924   0.283   0.418  C5    N1L   5  
N1L  C6    C6    C  0  1  N  N  N  17.064  17.754  39.542   2.346   0.527  -0.017  C6    N1L   6  
N1L  N2    N2    N  0  1  N  N  N  15.747  20.347  44.562  -3.261  -0.151   0.191  N2    N1L   7  
N1L  O3    O3    O  0  1  N  N  N  17.169  17.590  44.639  -1.566  -2.384  -0.475  O3    N1L   8  
N1L  O4    O4    O  0  1  N  N  N  18.302  16.673  42.123   1.191  -2.114   0.237  O4    N1L   9  
N1L  O5    O5    O  0  1  N  N  N  15.852  19.398  40.909   0.104   1.377   0.003  O5    N1L  10  
N1L  O6B   O6A   O  0  1  N  N  N  15.782  17.797  38.832   3.316  -0.325   0.351  O6B   N1L  11  
N1L  O6A   O6B   O  0  1  N  N  N  17.662  16.437  39.608   2.613   1.489  -0.697  O6A   N1L  12  
N1L  O1    O1    O  0  1  N  Y  N  14.676  21.123  42.209  -1.987   2.412  -0.051  O1    N1L  13  
N1L  H1    H1    H  0  1  N  N  N  16.665  20.713  42.250  -1.333   1.180   1.474  H1    N1L  14  
N1L  H2    H2    H  0  1  N  N  N  14.838  18.671  43.570  -1.840   0.101  -1.337  H2    N1L  15  
N1L  HO1   H1O   H  0  1  N  Y  N  14.689  21.618  41.398  -1.659   3.244   0.317  HO1   N1L  16  
N1L  H3    H3    H  0  1  N  N  N  17.876  19.089  43.436  -1.125  -1.344   1.257  H3    N1L  17  
N1L  H21N  H21N  H  0  0  N  N  N  15.751  19.915  45.464  -3.818   0.647  -0.075  H21N  N1L  18  
N1L  H22N  H22N  H  0  0  N  N  N  16.564  20.915  44.461  -3.661  -1.006  -0.167  H22N  N1L  19  
N1L  H4    H4    H  0  1  N  N  N  16.228  16.878  42.168   0.484  -0.934  -1.306  H4    N1L  20  
N1L  HO3   HA    H  0  1  N  Y  N  17.958  17.067  44.565  -1.096  -3.199  -0.249  HO3   N1L  21  
N1L  H5    H5    H  0  1  N  N  N  17.905  19.072  40.950   0.886   0.191   1.503  H5    N1L  22  
N1L  HO4   HB    H  0  1  N  Y  N  18.420  16.347  41.239   2.131  -2.047   0.019  HO4   N1L  23  
N1L  HO6B  H6A   H  0  0  N  N  N  15.558  16.925  38.528   4.212  -0.127   0.048  HO6B  N1L  24  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
N1L  C1   C2    SING  N  N   1  
N1L  C1   O5    SING  N  N   2  
N1L  C1   O1    SING  N  N   3  
N1L  C2   C3    SING  N  N   4  
N1L  C2   N2    SING  N  N   5  
N1L  C3   C4    SING  N  N   6  
N1L  C3   O3    SING  N  N   7  
N1L  C4   C5    SING  N  N   8  
N1L  C4   O4    SING  N  N   9  
N1L  C5   C6    SING  N  N  10  
N1L  C5   O5    SING  N  N  11  
N1L  C6   O6B   SING  N  N  12  
N1L  C6   O6A   DOUB  N  N  13  
N1L  C1   H1    SING  N  N  14  
N1L  C2   H2    SING  N  N  15  
N1L  O1   HO1   SING  N  N  16  
N1L  C3   H3    SING  N  N  17  
N1L  N2   H21N  SING  N  N  18  
N1L  N2   H22N  SING  N  N  19  
N1L  C4   H4    SING  N  N  20  
N1L  O3   HO3   SING  N  N  21  
N1L  C5   H5    SING  N  N  22  
N1L  O4   HO4   SING  N  N  23  
N1L  O6B  HO6B  SING  N  N  24  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
N1L  SMILES            ACDLabs               12.01  "O=C(O)C1OC(O)C(N)C(O)C1O"  
N1L  InChI             InChI                 1.03   "InChI=1S/C6H11NO6/c7-1-2(8)3(9)4(5(10)11)13-6(1)12/h1-4,6,8-9,12H,7H2,(H,10,11)/t1-,2-,3+,4+,6-/m1/s1"  
N1L  InChIKey          InChI                 1.03   CRIPFXSBMSGPKB-LVBGKUAWSA-N  
N1L  SMILES_CANONICAL  CACTVS                3.385  "N[C@H]1[C@H](O)O[C@@H]([C@@H](O)[C@@H]1O)C(O)=O"  
N1L  SMILES            CACTVS                3.385  "N[CH]1[CH](O)O[CH]([CH](O)[CH]1O)C(O)=O"  
N1L  SMILES_CANONICAL  "OpenEye OEToolkits"  1.9.2  "[C@H]1([C@H]([C@@H]([C@H](O[C@H]1O)C(=O)O)O)O)N"  
N1L  SMILES            "OpenEye OEToolkits"  1.9.2  "C1(C(C(C(OC1O)C(=O)O)O)O)N"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
N1L  "SYSTEMATIC NAME"            ACDLabs               12.01  "2-amino-2-deoxy-beta-D-glucopyranuronic acid"  
N1L  "SYSTEMATIC NAME"            "OpenEye OEToolkits"  1.9.2  "(2S,3S,4R,5R,6R)-5-azanyl-3,4,6-tris(oxidanyl)oxane-2-carboxylic acid"  
N1L  "IUPAC CARBOHYDRATE SYMBOL"  PDB-CARE              1.0    b-D-GlcpAN  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
N1L  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
N1L  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
N1L  "CARBOHYDRATE ANOMER"                  beta      PDB  ?  
N1L  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
N1L  "Create component"          2008-03-11  EBI   
N1L  "Modify descriptor"         2014-09-05  RCSB  
N1L  "Other modification"        2020-07-03  RCSB  
N1L  "Modify name"               2020-07-17  RCSB  
N1L  "Modify synonyms"           2020-07-17  RCSB  
N1L  "Modify linking type"       2020-07-17  RCSB  
N1L  "Modify atom id"            2020-07-17  RCSB  
N1L  "Modify component atom id"  2020-07-17  RCSB  
N1L  "Modify leaving atom flag"  2020-07-17  RCSB  
##
