data_N38
#

_chem_comp.id                                   N38
_chem_comp.name                                 
;3-cyclohexyl-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-N~2~-{[3-(4-methoxyphenoxy)propyl]sulfonyl}-L-
alaninamide
;

_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C26 H41 N3 O7 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        
;3-cyclohexyl-N~2~-{[3-(4-methoxyphenoxy)propyl]sulfonyl}-N-{(2S)-1-oxo-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-L-alan
inamide (bound form)
;

_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2016-09-12
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       539.685
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    N38
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5T6D
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
N38  C01  C1   C  0  1  N  N  N   2.950   2.103  -10.679  -8.836   1.002  -0.375  C01  N38   1  
N38  C03  C2   C  0  1  Y  N  N   4.307   4.108  -10.980  -7.512  -0.889   0.198  C03  N38   2  
N38  C04  C3   C  0  1  Y  N  N   5.280   3.671  -10.089  -7.353  -2.169   0.709  C04  N38   3  
N38  C05  C4   C  0  1  Y  N  N   6.381   4.471   -9.810  -6.101  -2.751   0.736  C05  N38   4  
N38  C06  C5   C  0  1  Y  N  N   6.504   5.713  -10.421  -5.003  -2.057   0.252  C06  N38   5  
N38  C08  C6   C  0  1  N  N  N   8.812   5.845   -9.913  -2.684  -1.857  -0.236  C08  N38   6  
N38  C09  C7   C  0  1  N  N  N   9.939   6.879   -9.872  -1.387  -2.661  -0.123  C09  N38   7  
N38  C10  C8   C  0  1  N  N  N   9.595   7.998   -8.893  -0.224  -1.834  -0.675  C10  N38   8  
N38  C13  C9   C  0  1  N  N  S   9.718  11.937   -8.476   2.774  -0.511  -0.510  C13  N38   9  
N38  C14  C10  C  0  1  N  N  N   9.608  12.753   -7.205   4.276  -0.235  -0.591  C14  N38  10  
N38  C15  C11  C  0  1  N  N  N   8.666  12.153   -6.162   5.035  -1.309   0.191  C15  N38  11  
N38  C16  C12  C  0  1  N  N  N   7.250  12.186   -6.727   4.688  -1.199   1.677  C16  N38  12  
N38  C17  C13  C  0  1  N  N  N   6.234  11.727   -5.703   5.447  -2.273   2.459  C17  N38  13  
N38  C18  C14  C  0  1  N  N  N   6.375  12.509   -4.382   6.952  -2.072   2.271  C18  N38  14  
N38  C19  C15  C  0  1  N  N  N   7.798  12.543   -3.826   7.300  -2.182   0.785  C19  N38  15  
N38  C20  C16  C  0  1  N  N  N   8.787  13.001   -4.876   6.541  -1.108   0.003  C20  N38  16  
N38  C21  C17  C  0  1  N  N  N  10.512  12.769   -9.504   2.021   0.596  -1.201  C21  N38  17  
N38  C23  C18  C  0  1  N  N  S  10.390  14.372  -11.442   1.410   2.943  -1.440  C23  N38  18  
N38  C24  C19  C  0  1  N  N  N   9.948  13.812  -12.805   1.122   4.065  -0.441  C24  N38  19  
N38  C25  C20  C  0  1  N  N  S  10.314  12.345  -13.124   0.197   3.542   0.660  C25  N38  20  
N38  C26  C21  C  0  1  N  N  N  10.055  12.078  -14.409  -0.092   4.630   1.670  C26  N38  21  
N38  C28  C22  C  0  1  N  N  N  12.219  11.028  -13.782  -2.133   3.614   1.226  C28  N38  22  
N38  C29  C23  C  0  1  N  N  N  11.915  11.953  -12.871  -1.191   3.187   0.078  C29  N38  23  
N38  C31  C24  C  0  1  N  N  N  10.056  15.851  -11.313   2.254   3.491  -2.592  C31  N38  24  
N38  C36  C25  C  0  1  Y  N  N   5.546   6.143  -11.321  -5.161  -0.778  -0.261  C36  N38  25  
N38  C37  C26  C  0  1  Y  N  N   4.448   5.343  -11.596  -6.413  -0.195  -0.287  C37  N38  26  
N38  N12  N1   N  0  1  N  N  N  10.343  10.687   -8.211   2.476  -1.787  -1.165  N12  N38  27  
N38  N22  N2   N  0  1  N  N  N   9.708  13.566  -10.405   2.142   1.866  -0.768  N22  N38  28  
N38  N27  N3   N  0  1  N  N  N  11.208  11.205  -14.936  -1.403   4.652   1.964  N27  N38  29  
N38  O02  O1   O  0  1  N  N  N   3.173   3.338  -11.315  -8.746  -0.318   0.166  O02  N38  30  
N38  O07  O2   O  0  1  N  N  N   7.608   6.531  -10.151  -3.770  -2.630   0.279  O07  N38  31  
N38  O30  O3   O  0  1  N  N  N   9.124  12.393  -15.055   0.739   5.375   2.146  O30  N38  32  
N38  O32  O4   O  0  1  N  N  N  10.681  16.354  -10.140   3.434   4.105  -2.069  O32  N38  33  
N38  O33  O5   O  0  1  N  N  N  11.706  12.787   -9.551   1.306   0.344  -2.148  O33  N38  34  
N38  O34  O6   O  0  1  N  N  N  11.776   9.341   -9.861   1.684  -2.947   0.823  O34  N38  35  
N38  O35  O7   O  0  1  N  N  N   9.716  10.039  -10.619   1.292  -3.897  -1.427  O35  N38  36  
N38  S11  S1   S  0  1  N  N  N  10.399   9.515   -9.445   1.314  -2.788  -0.540  S11  N38  37  
N38  H1   H1   H  0  1  N  N  N   2.025   1.652  -11.067  -9.872   1.338  -0.341  H1   N38  38  
N38  H2   H2   H  0  1  N  N  N   3.797   1.430  -10.878  -8.215   1.678   0.213  H2   N38  39  
N38  H3   H3   H  0  1  N  N  N   2.854   2.261   -9.595  -8.489   0.996  -1.408  H3   N38  40  
N38  H4   H4   H  0  1  N  N  N   5.180   2.707   -9.612  -8.208  -2.709   1.087  H4   N38  41  
N38  H5   H5   H  0  1  N  N  N   7.139   4.129   -9.121  -5.977  -3.747   1.135  H5   N38  42  
N38  H6   H6   H  0  1  N  N  N   8.756   5.314   -8.951  -2.590  -0.935   0.336  H6   N38  43  
N38  H7   H7   H  0  1  N  N  N   8.997   5.122  -10.721  -2.872  -1.618  -1.283  H7   N38  44  
N38  H8   H8   H  0  1  N  N  N  10.870   6.389   -9.550  -1.198  -2.901   0.924  H8   N38  45  
N38  H9   H9   H  0  1  N  N  N  10.077   7.305  -10.877  -1.480  -3.584  -0.695  H9   N38  46  
N38  H10  H10  H  0  1  N  N  N   8.505   8.145   -8.867  -0.413  -1.595  -1.721  H10  N38  47  
N38  H11  H11  H  0  1  N  N  N   9.954   7.734   -7.887  -0.131  -0.912  -0.102  H11  N38  48  
N38  H12  H12  H  0  1  N  N  N   8.706  11.771   -8.875   2.469  -0.560   0.536  H12  N38  49  
N38  H13  H13  H  0  1  N  N  N  10.610  12.836   -6.759   4.593  -0.252  -1.633  H13  N38  50  
N38  H14  H14  H  0  1  N  N  N   9.240  13.756   -7.468   4.489   0.745  -0.163  H14  N38  51  
N38  H15  H15  H  0  1  N  N  N   8.959  11.115   -5.948   4.752  -2.295  -0.176  H15  N38  52  
N38  H16  H16  H  0  1  N  N  N   7.011  13.215   -7.032   4.972  -0.213   2.045  H16  N38  53  
N38  H17  H17  H  0  1  N  N  N   7.199  11.523   -7.603   3.616  -1.342   1.811  H17  N38  54  
N38  H18  H18  H  0  1  N  N  N   5.223  11.885   -6.106   5.200  -2.195   3.518  H18  N38  55  
N38  H19  H19  H  0  1  N  N  N   6.386  10.656   -5.503   5.163  -3.259   2.091  H19  N38  56  
N38  H20  H20  H  0  1  N  N  N   6.048  13.544   -4.557   7.236  -1.086   2.639  H20  N38  57  
N38  H21  H21  H  0  1  N  N  N   5.722  12.040   -3.631   7.493  -2.837   2.828  H21  N38  58  
N38  H22  H22  H  0  1  N  N  N   8.075  11.533   -3.489   8.372  -2.039   0.651  H22  N38  59  
N38  H23  H23  H  0  1  N  N  N   7.833  13.237   -2.973   7.016  -3.168   0.417  H23  N38  60  
N38  H24  H24  H  0  1  N  N  N   9.807  12.903   -4.476   6.788  -1.186  -1.056  H24  N38  61  
N38  H25  H25  H  0  1  N  N  N   8.589  14.055   -5.121   6.825  -0.122   0.371  H25  N38  62  
N38  H26  H26  H  0  1  N  N  N  11.478  14.244  -11.346   0.470   2.554  -1.831  H26  N38  63  
N38  H27  H27  H  0  1  N  N  N  10.403  14.442  -13.584   2.057   4.406   0.002  H27  N38  64  
N38  H28  H28  H  0  1  N  N  N   8.853  13.898  -12.857   0.639   4.895  -0.956  H28  N38  65  
N38  H29  H29  H  0  1  N  N  N   9.723  11.696  -12.462   0.640   2.673   1.148  H29  N38  66  
N38  H30  H30  H  0  1  N  N  N  12.128  10.022  -13.347  -3.060   4.020   0.821  H30  N38  67  
N38  H31  H31  H  0  1  N  N  N  13.245  11.178  -14.149  -2.345   2.765   1.875  H31  N38  68  
N38  H32  H32  H  0  1  N  N  N  12.053  11.550  -11.857  -1.393   3.760  -0.826  H32  N38  69  
N38  H33  H33  H  0  1  N  N  N  12.551  12.841  -13.002  -1.271   2.117  -0.114  H33  N38  70  
N38  H34  H34  H  0  1  N  N  N  10.429  16.394  -12.194   2.535   2.674  -3.258  H34  N38  71  
N38  H35  H35  H  0  1  N  N  N   8.966  15.980  -11.237   1.676   4.229  -3.147  H35  N38  72  
N38  H36  H36  H  0  1  N  N  N   5.653   7.101  -11.809  -4.306  -0.237  -0.638  H36  N38  73  
N38  H37  H37  H  0  1  N  N  N   3.698   5.683  -12.294  -6.537   0.801  -0.685  H37  N38  74  
N38  H38  H38  H  0  1  N  N  N   9.860  10.276   -7.438   2.960  -2.046  -1.964  H38  N38  75  
N38  H39  H39  H  0  1  N  N  N   8.711  13.572  -10.328   2.714   2.068  -0.010  H39  N38  76  
N38  H40  H40  H  0  1  N  N  N  11.288  10.823  -15.857  -1.815   5.273   2.585  H40  N38  77  
N38  H41  H41  H  0  1  N  N  N  10.481  17.278  -10.046   4.017   4.475  -2.745  H41  N38  78  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
N38  O30  C26  DOUB  N  N   1  
N38  N27  C26  SING  N  N   2  
N38  N27  C28  SING  N  N   3  
N38  C26  C25  SING  N  N   4  
N38  C28  C29  SING  N  N   5  
N38  C25  C29  SING  N  N   6  
N38  C25  C24  SING  N  N   7  
N38  C24  C23  SING  N  N   8  
N38  C37  C36  DOUB  Y  N   9  
N38  C37  C03  SING  Y  N  10  
N38  C23  C31  SING  N  N  11  
N38  C23  N22  SING  N  N  12  
N38  C36  C06  SING  Y  N  13  
N38  O02  C03  SING  N  N  14  
N38  O02  C01  SING  N  N  15  
N38  C31  O32  SING  N  N  16  
N38  C03  C04  DOUB  Y  N  17  
N38  O35  S11  DOUB  N  N  18  
N38  C06  O07  SING  N  N  19  
N38  C06  C05  DOUB  Y  N  20  
N38  N22  C21  SING  N  N  21  
N38  O07  C08  SING  N  N  22  
N38  C04  C05  SING  Y  N  23  
N38  C08  C09  SING  N  N  24  
N38  C09  C10  SING  N  N  25  
N38  O34  S11  DOUB  N  N  26  
N38  O33  C21  DOUB  N  N  27  
N38  C21  C13  SING  N  N  28  
N38  S11  C10  SING  N  N  29  
N38  S11  N12  SING  N  N  30  
N38  C13  N12  SING  N  N  31  
N38  C13  C14  SING  N  N  32  
N38  C14  C15  SING  N  N  33  
N38  C16  C15  SING  N  N  34  
N38  C16  C17  SING  N  N  35  
N38  C15  C20  SING  N  N  36  
N38  C17  C18  SING  N  N  37  
N38  C20  C19  SING  N  N  38  
N38  C18  C19  SING  N  N  39  
N38  C01  H1   SING  N  N  40  
N38  C01  H2   SING  N  N  41  
N38  C01  H3   SING  N  N  42  
N38  C04  H4   SING  N  N  43  
N38  C05  H5   SING  N  N  44  
N38  C08  H6   SING  N  N  45  
N38  C08  H7   SING  N  N  46  
N38  C09  H8   SING  N  N  47  
N38  C09  H9   SING  N  N  48  
N38  C10  H10  SING  N  N  49  
N38  C10  H11  SING  N  N  50  
N38  C13  H12  SING  N  N  51  
N38  C14  H13  SING  N  N  52  
N38  C14  H14  SING  N  N  53  
N38  C15  H15  SING  N  N  54  
N38  C16  H16  SING  N  N  55  
N38  C16  H17  SING  N  N  56  
N38  C17  H18  SING  N  N  57  
N38  C17  H19  SING  N  N  58  
N38  C18  H20  SING  N  N  59  
N38  C18  H21  SING  N  N  60  
N38  C19  H22  SING  N  N  61  
N38  C19  H23  SING  N  N  62  
N38  C20  H24  SING  N  N  63  
N38  C20  H25  SING  N  N  64  
N38  C23  H26  SING  N  N  65  
N38  C24  H27  SING  N  N  66  
N38  C24  H28  SING  N  N  67  
N38  C25  H29  SING  N  N  68  
N38  C28  H30  SING  N  N  69  
N38  C28  H31  SING  N  N  70  
N38  C29  H32  SING  N  N  71  
N38  C29  H33  SING  N  N  72  
N38  C31  H34  SING  N  N  73  
N38  C31  H35  SING  N  N  74  
N38  C36  H36  SING  N  N  75  
N38  C37  H37  SING  N  N  76  
N38  N12  H38  SING  N  N  77  
N38  N22  H39  SING  N  N  78  
N38  N27  H40  SING  N  N  79  
N38  O32  H41  SING  N  N  80  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
N38  SMILES            ACDLabs               12.01  "COc3ccc(OCCCS(NC(CC1CCCCC1)C(NC(CO)CC2CCNC2=O)=O)(=O)=O)cc3"  
N38  InChI             InChI                 1.03   "InChI=1S/C26H41N3O7S/c1-35-22-8-10-23(11-9-22)36-14-5-15-37(33,34)29-24(16-19-6-3-2-4-7-19)26(32)28-21(18-30)17-20-12-13-27-25(20)31/h8-11,19-21,24,29-30H,2-7,12-18H2,1H3,(H,27,31)(H,28,32)/t20-,21-,24-/m0/s1"  
N38  InChIKey          InChI                 1.03   JSFDYEDTWWEPLF-HFMPRLQTSA-N  
N38  SMILES_CANONICAL  CACTVS                3.385  "COc1ccc(OCCC[S](=O)(=O)N[C@@H](CC2CCCCC2)C(=O)N[C@H](CO)C[C@@H]3CCNC3=O)cc1"  
N38  SMILES            CACTVS                3.385  "COc1ccc(OCCC[S](=O)(=O)N[CH](CC2CCCCC2)C(=O)N[CH](CO)C[CH]3CCNC3=O)cc1"  
N38  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "COc1ccc(cc1)OCCCS(=O)(=O)N[C@@H](CC2CCCCC2)C(=O)N[C@@H](C[C@@H]3CCNC3=O)CO"  
N38  SMILES            "OpenEye OEToolkits"  2.0.6  "COc1ccc(cc1)OCCCS(=O)(=O)NC(CC2CCCCC2)C(=O)NC(CC3CCNC3=O)CO"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
N38  "SYSTEMATIC NAME"  ACDLabs               12.01  "3-cyclohexyl-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-N~2~-{[3-(4-methoxyphenoxy)propyl]sulfonyl}-L-alaninamide"  
N38  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.6  "(2~{S})-3-cyclohexyl-2-[3-(4-methoxyphenoxy)propylsulfonylamino]-~{N}-[(2~{S})-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]propanamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
N38  "Create component"  2016-09-12  RCSB  
N38  "Modify formula"    2016-09-14  RCSB  
N38  "Initial release"   2016-11-23  RCSB  
N38  "Modify synonyms"   2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     N38
_pdbx_chem_comp_synonyms.name        "3-cyclohexyl-N~2~-{[3-(4-methoxyphenoxy)propyl]sulfonyl}-N-{(2S)-1-oxo-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-L-alaninamide (bound form)"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
