data_N5U
# 
_chem_comp.id                                    N5U 
_chem_comp.name                                  "1-[(2~{R})-2-(3-methylimidazol-4-yl)piperidin-1-yl]propan-1-one" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C12 H19 N3 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-08-12 
_chem_comp.pdbx_modified_date                    2023-05-15 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        221.299 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     N5U 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8AO8 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
N5U C1  C1  C 0 1 N N N 9.147  5.991  45.181 -0.938 0.002  1.987  C1  N5U 1  
N5U C3  C2  C 0 1 Y N N 11.466 6.058  44.283 -2.997 0.265  0.570  C3  N5U 2  
N5U N4  N1  N 0 1 Y N N 12.330 6.886  43.733 -3.271 0.674  -0.638 N4  N5U 3  
N5U C5  C3  C 0 1 Y N N 11.694 8.105  43.648 -2.135 1.038  -1.251 C5  N5U 4  
N5U C6  C4  C 0 1 Y N N 10.407 7.992  44.167 -1.118 0.847  -0.390 C6  N5U 5  
N5U C7  C5  C 0 1 N N R 9.291  9.000  44.322 0.342  1.120  -0.649 C7  N5U 6  
N5U C10 C6  C 0 1 N N N 10.118 11.067 43.067 2.374  2.303  0.194  C10 N5U 7  
N5U C11 C7  C 0 1 N N N 9.039  10.837 42.028 3.071  0.964  0.444  C11 N5U 8  
N5U C12 C8  C 0 1 N N N 8.692  9.369  41.944 2.575  -0.064 -0.577 C12 N5U 9  
N5U C14 C9  C 0 1 N N N 7.067  8.338  43.572 0.478  -1.303 -0.328 C14 N5U 10 
N5U C16 C10 C 0 1 N N N 6.050  8.083  42.474 1.277  -2.550 -0.050 C16 N5U 11 
N5U C17 C11 C 0 1 N N N 4.964  7.120  42.901 0.326  -3.738 0.117  C17 N5U 12 
N5U O15 O1  O 0 1 N N N 6.780  8.028  44.727 -0.733 -1.358 -0.386 O15 N5U 13 
N5U N13 N2  N 0 1 N N N 8.278  8.879  43.264 1.108  -0.126 -0.511 N13 N5U 14 
N5U C9  C12 C 0 1 N N N 9.726  10.469 44.415 0.863  2.135  0.373  C9  N5U 15 
N5U N2  N3  N 0 1 Y N N 10.296 6.659  44.566 -1.663 0.356  0.765  N2  N5U 16 
N5U H18 H1  H 0 1 N N N 9.394  4.936  45.370 -0.722 -1.066 1.986  H18 N5U 17 
N5U H19 H2  H 0 1 N N N 8.901  6.486  46.132 -0.003 0.561  2.030  H19 N5U 18 
N5U H20 H3  H 0 1 N N N 8.283  6.050  44.503 -1.548 0.248  2.856  H20 N5U 19 
N5U H21 H4  H 0 1 N N N 11.673 5.017  44.484 -3.717 -0.085 1.295  H21 N5U 20 
N5U H22 H5  H 0 1 N N N 12.126 9.008  43.242 -2.051 1.418  -2.259 H22 N5U 21 
N5U H8  H6  H 0 1 N N N 8.790  8.767  45.273 0.466  1.519  -1.656 H8  N5U 22 
N5U H25 H7  H 0 1 N N N 11.052 10.597 42.724 2.743  3.043  0.904  H25 N5U 23 
N5U H26 H8  H 0 1 N N N 10.275 12.149 43.187 2.584  2.638  -0.822 H26 N5U 24 
N5U H27 H9  H 0 1 N N N 9.401  11.180 41.048 4.149  1.090  0.339  H27 N5U 25 
N5U H28 H10 H 0 1 N N N 8.140  11.406 42.307 2.842  0.617  1.452  H28 N5U 26 
N5U H29 H11 H 0 1 N N N 7.869  9.229  41.228 2.883  0.237  -1.578 H29 N5U 27 
N5U H30 H12 H 0 1 N N N 9.573  8.804  41.605 2.992  -1.043 -0.343 H30 N5U 28 
N5U H31 H13 H 0 1 N N N 6.571  7.662  41.601 1.954  -2.741 -0.883 H31 N5U 29 
N5U H34 H14 H 0 1 N N N 5.584  9.040  42.196 1.855  -2.416 0.864  H34 N5U 30 
N5U H33 H15 H 0 1 N N N 4.257  6.972  42.071 -0.350 -3.547 0.950  H33 N5U 31 
N5U H1  H16 H 0 1 N N N 5.416  6.155  43.174 -0.251 -3.872 -0.798 H1  N5U 32 
N5U H32 H17 H 0 1 N N N 4.429  7.533  43.769 0.904  -4.640 0.318  H32 N5U 33 
N5U H23 H18 H 0 1 N N N 10.591 10.535 45.091 0.370  3.095  0.218  H23 N5U 34 
N5U H24 H19 H 0 1 N N N 8.892  11.055 44.828 0.654  1.777  1.381  H24 N5U 35 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
N5U C12 C11 SING N N 1  
N5U C12 N13 SING N N 2  
N5U C11 C10 SING N N 3  
N5U C16 C17 SING N N 4  
N5U C16 C14 SING N N 5  
N5U C10 C9  SING N N 6  
N5U N13 C14 SING N N 7  
N5U N13 C7  SING N N 8  
N5U C14 O15 DOUB N N 9  
N5U C5  N4  SING Y N 10 
N5U C5  C6  DOUB Y N 11 
N5U N4  C3  DOUB Y N 12 
N5U C6  C7  SING N N 13 
N5U C6  N2  SING Y N 14 
N5U C3  N2  SING Y N 15 
N5U C7  C9  SING N N 16 
N5U N2  C1  SING N N 17 
N5U C1  H18 SING N N 18 
N5U C1  H19 SING N N 19 
N5U C1  H20 SING N N 20 
N5U C3  H21 SING N N 21 
N5U C5  H22 SING N N 22 
N5U C7  H8  SING N N 23 
N5U C10 H25 SING N N 24 
N5U C10 H26 SING N N 25 
N5U C11 H27 SING N N 26 
N5U C11 H28 SING N N 27 
N5U C12 H29 SING N N 28 
N5U C12 H30 SING N N 29 
N5U C16 H31 SING N N 30 
N5U C16 H34 SING N N 31 
N5U C17 H33 SING N N 32 
N5U C17 H1  SING N N 33 
N5U C17 H32 SING N N 34 
N5U C9  H23 SING N N 35 
N5U C9  H24 SING N N 36 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
N5U InChI            InChI                1.06  "InChI=1S/C12H19N3O/c1-3-12(16)15-7-5-4-6-10(15)11-8-13-9-14(11)2/h8-10H,3-7H2,1-2H3/t10-/m1/s1" 
N5U InChIKey         InChI                1.06  ZRIHLDNGAGNVRX-SNVBAGLBSA-N                                                                      
N5U SMILES_CANONICAL CACTVS               3.385 "CCC(=O)N1CCCC[C@@H]1c2cncn2C"                                                                   
N5U SMILES           CACTVS               3.385 "CCC(=O)N1CCCC[CH]1c2cncn2C"                                                                     
N5U SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCC(=O)N1CCCC[C@@H]1c2cncn2C"                                                                   
N5U SMILES           "OpenEye OEToolkits" 2.0.7 "CCC(=O)N1CCCCC1c2cncn2C"                                                                        
# 
_pdbx_chem_comp_identifier.comp_id           N5U 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "1-[(2~{R})-2-(3-methylimidazol-4-yl)piperidin-1-yl]propan-1-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
N5U "Create component" 2022-08-12 PDBE 
N5U "Initial release"  2022-09-28 RCSB 
N5U "Modify formula"   2023-05-15 PDBE 
# 
