data_ND1
#

_chem_comp.id                                   ND1
_chem_comp.name                                 "(2Z)-N,N-dimethyl-4-{[2-({5-[(1Z)-4,4,4-trifluoro-1-(3-fluoro-2H-indazol-5-yl)-2-phenylbut-1-en-1-yl]pyridin-2-yl}oxy)ethyl]amino}but-2-enamide"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C30 H29 F4 N5 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-05-10
_chem_comp.pdbx_modified_date                   2019-06-14
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       567.577
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    ND1
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6OWC
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
ND1  C10  C1   C  0  1  Y  N  N  36.142   2.425   -7.993   -0.585  -0.462   2.057  C10  ND1   1  
ND1  C11  C2   C  0  1  Y  N  N  35.695   1.517   -8.918    0.784  -0.300   1.975  C11  ND1   2  
ND1  C1   C3   C  0  1  N  N  N  38.721   1.939   -0.589  -11.294   0.167  -1.619  C1   ND1   3  
ND1  N1   N1   N  0  1  N  N  N  39.931   2.670   -1.060  -10.369   1.088  -0.955  N1   ND1   4  
ND1  C2   C4   C  0  1  N  N  N  41.102   2.879   -0.167  -10.550   2.535  -1.094  C2   ND1   5  
ND1  C3   C5   C  0  1  N  N  N  39.899   3.152   -2.346   -9.351   0.604  -0.215  C3   ND1   6  
ND1  O1   O1   O  0  1  N  N  N  38.933   2.954   -3.087   -9.201  -0.597  -0.099  O1   ND1   7  
ND1  C4   C6   C  0  1  N  N  N  41.157   3.866   -2.933   -8.422   1.530   0.452  C4   ND1   8  
ND1  C5   C7   C  0  1  N  N  N  40.829   5.067   -3.852   -7.339   1.059   1.062  C5   ND1   9  
ND1  C6   C8   C  0  1  N  N  N  39.960   4.812   -5.126   -6.806  -0.306   0.706  C6   ND1  10  
ND1  N2   N2   N  0  1  N  N  N  38.632   5.265   -4.763   -5.366  -0.213   0.431  N2   ND1  11  
ND1  C7   C9   C  0  1  N  N  N  37.638   5.636   -5.748   -4.812  -1.527   0.079  C7   ND1  12  
ND1  C8   C10  C  0  1  N  N  N  36.869   4.405   -6.247   -3.314  -1.390  -0.201  C8   ND1  13  
ND1  O2   O2   O  0  1  N  N  N  37.762   3.931   -7.277   -2.639  -1.003   0.998  O2   ND1  14  
ND1  C9   C11  C  0  1  Y  N  N  37.302   3.077   -8.210   -1.295  -0.838   0.922  C9   ND1  15  
ND1  N3   N3   N  0  1  Y  N  N  38.096   2.763   -9.289   -0.678  -1.036  -0.231  N3   ND1  16  
ND1  C13  C12  C  0  1  Y  N  N  37.618   1.821  -10.268    0.626  -0.887  -0.356  C13  ND1  17  
ND1  C12  C13  C  0  1  Y  N  N  36.384   1.147  -10.019    1.406  -0.518   0.739  C12  ND1  18  
ND1  C14  C14  C  0  1  N  N  N  35.814   0.262  -10.998    2.870  -0.352   0.596  C14  ND1  19  
ND1  C15  C15  C  0  1  N  N  N  36.608  -0.822  -11.569    3.648  -1.423   0.301  C15  ND1  20  
ND1  C16  C16  C  0  1  N  N  N  36.146  -1.594  -12.782    5.119  -1.234   0.031  C16  ND1  21  
ND1  C17  C17  C  0  1  N  N  N  35.851  -3.089  -12.512    5.344  -1.071  -1.474  C17  ND1  22  
ND1  F2   F1   F  0  1  N  N  N  35.012  -3.232  -11.537    6.686  -0.756  -1.713  F2   ND1  23  
ND1  F3   F2   F  0  1  N  N  N  35.312  -3.472  -13.717    5.023  -2.267  -2.125  F3   ND1  24  
ND1  F1   F3   F  0  1  N  N  N  36.958  -3.709  -12.230    4.530  -0.042  -1.959  F1   ND1  25  
ND1  C18  C18  C  0  1  Y  N  N  37.823  -1.257  -10.980    3.058  -2.768   0.245  C18  ND1  26  
ND1  C19  C19  C  0  1  Y  N  N  37.759  -1.691   -9.667    2.755  -3.353  -0.989  C19  ND1  27  
ND1  C20  C20  C  0  1  Y  N  N  38.924  -2.150   -9.048    2.201  -4.615  -1.033  C20  ND1  28  
ND1  C21  C21  C  0  1  Y  N  N  40.109  -2.185   -9.747    1.946  -5.303   0.140  C21  ND1  29  
ND1  C22  C22  C  0  1  Y  N  N  40.193  -1.709  -11.051    2.242  -4.732   1.366  C22  ND1  30  
ND1  C23  C23  C  0  1  Y  N  N  39.014  -1.269  -11.663    2.801  -3.473   1.426  C23  ND1  31  
ND1  C24  C24  C  0  1  Y  N  N  34.530   0.651  -11.485    3.483   0.982   0.774  C24  ND1  32  
ND1  C30  C25  C  0  1  Y  N  N  33.375  -0.207  -11.547    3.259   1.962  -0.172  C30  ND1  33  
ND1  C29  C26  C  0  1  Y  N  N  32.165   0.283  -11.968    3.843   3.231  -0.002  C29  ND1  34  
ND1  C28  C27  C  0  1  Y  N  N  30.929  -0.283  -12.139    3.834   4.415  -0.727  C28  ND1  35  
ND1  F4   F4   F  0  1  N  N  N  30.632  -1.618  -11.886    3.184   4.630  -1.892  F4   ND1  36  
ND1  N5   N4   N  0  1  Y  N  N  30.021   0.550  -12.580    4.584   5.306  -0.064  N5   ND1  37  
ND1  N4   N5   N  0  1  Y  N  N  30.729   1.726  -12.663    5.097   4.727   1.102  N4   ND1  38  
ND1  C27  C28  C  0  1  Y  N  N  32.008   1.560  -12.295    4.679   3.477   1.184  C27  ND1  39  
ND1  C26  C29  C  0  1  Y  N  N  33.057   2.429  -12.217    4.869   2.431   2.114  C26  ND1  40  
ND1  C25  C30  C  0  1  Y  N  N  34.289   1.977  -11.823    4.281   1.230   1.908  C25  ND1  41  
ND1  H1   H1   H  0  1  N  N  N  35.569   2.616   -7.098   -1.098  -0.303   2.994  H1   ND1  42  
ND1  H2   H2   H  0  1  N  N  N  34.727   1.067   -8.755    1.360  -0.013   2.842  H2   ND1  43  
ND1  H3   H3   H  0  1  N  N  N  38.873   1.607    0.449  -10.920  -0.066  -2.616  H3   ND1  44  
ND1  H4   H4   H  0  1  N  N  N  37.848   2.607   -0.636  -11.373  -0.751  -1.037  H4   ND1  45  
ND1  H5   H5   H  0  1  N  N  N  38.548   1.063   -1.232  -12.276   0.633  -1.699  H5   ND1  46  
ND1  H6   H6   H  0  1  N  N  N  40.908   2.410    0.809  -11.198   2.899  -0.296  H6   ND1  47  
ND1  H7   H7   H  0  1  N  N  N  41.995   2.425   -0.621   -9.581   3.030  -1.029  H7   ND1  48  
ND1  H8   H8   H  0  1  N  N  N  41.270   3.957   -0.029  -11.006   2.753  -2.060  H8   ND1  49  
ND1  H9   H9   H  0  1  N  N  N  42.167   3.550   -2.717   -8.621   2.591   0.447  H9   ND1  50  
ND1  H11  H11  H  0  1  N  N  N  41.192   6.057   -3.619   -6.840   1.654   1.813  H11  ND1  51  
ND1  H13  H13  H  0  1  N  N  N  39.949   3.742   -5.380   -6.973  -0.990   1.538  H13  ND1  52  
ND1  H14  H14  H  0  1  N  N  N  40.346   5.387   -5.980   -7.322  -0.677  -0.179  H14  ND1  53  
ND1  H15  H15  H  0  1  N  N  N  38.762   6.070   -4.184   -4.873   0.190   1.214  H15  ND1  54  
ND1  H17  H17  H  0  1  N  N  N  38.139   6.117   -6.601   -4.965  -2.219   0.906  H17  ND1  55  
ND1  H18  H18  H  0  1  N  N  N  36.928   6.343   -5.294   -5.314  -1.907  -0.811  H18  ND1  56  
ND1  H19  H19  H  0  1  N  N  N  35.886   4.680   -6.658   -2.920  -2.345  -0.547  H19  ND1  57  
ND1  H20  H20  H  0  1  N  N  N  36.737   3.659   -5.450   -3.155  -0.632  -0.968  H20  ND1  58  
ND1  H21  H21  H  0  1  N  N  N  38.180   1.629  -11.170    1.095  -1.058  -1.314  H21  ND1  59  
ND1  H24  H24  H  0  1  N  N  N  36.931  -1.531  -13.550    5.472  -0.343   0.550  H24  ND1  60  
ND1  H25  H25  H  0  1  N  N  N  35.226  -1.124  -13.159    5.669  -2.104   0.389  H25  ND1  61  
ND1  H26  H26  H  0  1  N  N  N  36.822  -1.675   -9.129    2.953  -2.816  -1.905  H26  ND1  62  
ND1  H27  H27  H  0  1  N  N  N  38.895  -2.478   -8.019    1.967  -5.067  -1.985  H27  ND1  63  
ND1  H28  H28  H  0  1  N  N  N  40.991  -2.590   -9.274    1.512  -6.291   0.100  H28  ND1  64  
ND1  H29  H29  H  0  1  N  N  N  41.137  -1.680  -11.574    2.039  -5.275   2.277  H29  ND1  65  
ND1  H30  H30  H  0  1  N  N  N  39.041  -0.933  -12.689    3.032  -3.028   2.383  H30  ND1  66  
ND1  H31  H31  H  0  1  N  N  N  33.462  -1.244  -11.260    2.642   1.758  -1.035  H31  ND1  67  
ND1  H32  H32  H  0  1  N  N  N  29.061   0.376  -12.800    4.748   6.218  -0.351  H32  ND1  68  
ND1  H33  H33  H  0  1  N  N  N  32.917   3.471  -12.465    5.479   2.591   2.991  H33  ND1  69  
ND1  H34  H34  H  0  1  N  N  N  35.107   2.681  -11.773    4.434   0.439   2.627  H34  ND1  70  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ND1  F3   C17  SING  N  N   1  
ND1  C16  C17  SING  N  N   2  
ND1  C16  C15  SING  N  N   3  
ND1  N4   N5   SING  Y  N   4  
ND1  N4   C27  DOUB  Y  N   5  
ND1  N5   C28  SING  Y  N   6  
ND1  C17  F1   SING  N  N   7  
ND1  C17  F2   SING  N  N   8  
ND1  C27  C26  SING  Y  N   9  
ND1  C27  C29  SING  Y  N  10  
ND1  C26  C25  DOUB  Y  N  11  
ND1  C28  C29  DOUB  Y  N  12  
ND1  C28  F4   SING  N  N  13  
ND1  C29  C30  SING  Y  N  14  
ND1  C25  C24  SING  Y  N  15  
ND1  C23  C22  DOUB  Y  N  16  
ND1  C23  C18  SING  Y  N  17  
ND1  C15  C14  DOUB  N  Z  18  
ND1  C15  C18  SING  N  N  19  
ND1  C30  C24  DOUB  Y  N  20  
ND1  C24  C14  SING  N  N  21  
ND1  C22  C21  SING  Y  N  22  
ND1  C14  C12  SING  N  N  23  
ND1  C18  C19  DOUB  Y  N  24  
ND1  C13  C12  DOUB  Y  N  25  
ND1  C13  N3   SING  Y  N  26  
ND1  C12  C11  SING  Y  N  27  
ND1  C21  C20  DOUB  Y  N  28  
ND1  C19  C20  SING  Y  N  29  
ND1  N3   C9   DOUB  Y  N  30  
ND1  C11  C10  DOUB  Y  N  31  
ND1  C9   C10  SING  Y  N  32  
ND1  C9   O2   SING  N  N  33  
ND1  O2   C8   SING  N  N  34  
ND1  C8   C7   SING  N  N  35  
ND1  C7   N2   SING  N  N  36  
ND1  C6   N2   SING  N  N  37  
ND1  C6   C5   SING  N  N  38  
ND1  C5   C4   DOUB  N  Z  39  
ND1  O1   C3   DOUB  N  N  40  
ND1  C4   C3   SING  N  N  41  
ND1  C3   N1   SING  N  N  42  
ND1  N1   C1   SING  N  N  43  
ND1  N1   C2   SING  N  N  44  
ND1  C10  H1   SING  N  N  45  
ND1  C11  H2   SING  N  N  46  
ND1  C1   H3   SING  N  N  47  
ND1  C1   H4   SING  N  N  48  
ND1  C1   H5   SING  N  N  49  
ND1  C2   H6   SING  N  N  50  
ND1  C2   H7   SING  N  N  51  
ND1  C2   H8   SING  N  N  52  
ND1  C4   H9   SING  N  N  53  
ND1  C5   H11  SING  N  N  54  
ND1  C6   H13  SING  N  N  55  
ND1  C6   H14  SING  N  N  56  
ND1  N2   H15  SING  N  N  57  
ND1  C7   H17  SING  N  N  58  
ND1  C7   H18  SING  N  N  59  
ND1  C8   H19  SING  N  N  60  
ND1  C8   H20  SING  N  N  61  
ND1  C13  H21  SING  N  N  62  
ND1  C16  H24  SING  N  N  63  
ND1  C16  H25  SING  N  N  64  
ND1  C19  H26  SING  N  N  65  
ND1  C20  H27  SING  N  N  66  
ND1  C21  H28  SING  N  N  67  
ND1  C22  H29  SING  N  N  68  
ND1  C23  H30  SING  N  N  69  
ND1  C30  H31  SING  N  N  70  
ND1  N5   H32  SING  N  N  71  
ND1  C26  H33  SING  N  N  72  
ND1  C25  H34  SING  N  N  73  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
ND1  SMILES            ACDLabs               12.01  "c1cc(cnc1OCCNC[C@H]=[C@H]C(N(C)C)=O)\C(=C(/c2ccccc2)CC(F)(F)F)c4cc3c(F)nnc3cc4"  
ND1  InChI             InChI                 1.03   "InChI=1S/C30H29F4N5O2/c1-39(2)27(40)9-6-14-35-15-16-41-26-13-11-22(19-36-26)28(21-10-12-25-23(17-21)29(31)38-37-25)24(18-30(32,33)34)20-7-4-3-5-8-20/h3-13,17,19,35H,14-16,18H2,1-2H3,(H,37,38)/b9-6?,28-24-"  
ND1  InChIKey          InChI                 1.03   JPFTZIJTXCHJNE-LTZHIIGJSA-N  
ND1  SMILES_CANONICAL  CACTVS                3.385  "CN(C)C(=O)\C=C/CNCCOc1ccc(cn1)/C(=C(/CC(F)(F)F)c2ccccc2)c3ccc4n[nH]c(F)c4c3"  
ND1  SMILES            CACTVS                3.385  "CN(C)C(=O)C=CCNCCOc1ccc(cn1)C(=C(CC(F)(F)F)c2ccccc2)c3ccc4n[nH]c(F)c4c3"  
ND1  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CN(C)C(=O)C=CCNCCOc1ccc(cn1)/C(=C(/CC(F)(F)F)\c2ccccc2)/c3ccc4c(c3)c([nH]n4)F"  
ND1  SMILES            "OpenEye OEToolkits"  2.0.7  "CN(C)C(=O)C=CCNCCOc1ccc(cn1)C(=C(CC(F)(F)F)c2ccccc2)c3ccc4c(c3)c([nH]n4)F"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
ND1  "SYSTEMATIC NAME"  ACDLabs               12.01  "(2Z)-N,N-dimethyl-4-{[2-({5-[(1Z)-4,4,4-trifluoro-1-(3-fluoro-2H-indazol-5-yl)-2-phenylbut-1-en-1-yl]pyridin-2-yl}oxy)ethyl]amino}but-2-enamide"  
ND1  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "~{N},~{N}-dimethyl-4-[2-[5-[(~{Z})-4,4,4-tris(fluoranyl)-1-(3-fluoranyl-2~{H}-indazol-5-yl)-2-phenyl-but-1-enyl]pyridin-2-yl]oxyethylamino]but-2-enamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
ND1  "Create component"  2019-05-10  RCSB  
ND1  "Initial release"   2019-06-19  RCSB  
##
