data_NYG
#

_chem_comp.id                                   NYG
_chem_comp.name                                 "[(4Z)-2-[(1S)-1,3-DIAMINO-3-OXOPROPYL]-4-(4-HYDROXYBENZYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL]ACETIC ACID"
_chem_comp.type                                 "L-PEPTIDE LINKING"
_chem_comp.pdbx_type                            ATOMP
_chem_comp.formula                              "C15 H16 N4 O5"
_chem_comp.mon_nstd_parent_comp_id              "ASN,TYR,GLY"
_chem_comp.pdbx_synonyms                        "CHROMOPHORE (ASN-TYR-GLY)"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2007-01-19
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       332.311
_chem_comp.one_letter_code                      NYG
_chem_comp.three_letter_code                    NYG
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       "OpenEye/OEToolkits V1.4.2"
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       ?
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
NYG  OD1   OD1   O  0  1  N  N  N  -10.162  -31.227  -27.333  4.533  -0.170  -4.233  OD1   NYG   1  
NYG  CG1   CG1   C  0  1  N  N  N  -11.264  -30.730  -27.116  5.163  -0.422  -3.210  CG1   NYG   2  
NYG  ND1   ND1   N  0  1  N  N  N  -11.545  -30.108  -25.974  5.451  -1.702  -2.785  ND1   NYG   3  
NYG  CB1   CB1   C  0  1  N  N  N  -12.385  -30.823  -28.161  5.716   0.634  -2.270  CB1   NYG   4  
NYG  CA1   CA1   C  0  1  N  N  S  -13.787  -31.015  -27.540  4.866   1.898  -2.224  CA1   NYG   5  
NYG  N     N     N  0  1  N  N  N  -13.777  -32.148  -26.772  5.374   2.860  -1.284  N     NYG   6  
NYG  C1    C1    C  0  1  N  N  N  -14.778  -30.915  -28.569  3.480   1.593  -1.756  C1    NYG   7  
NYG  N3    N3    N  0  1  N  N  N  -16.160  -30.797  -28.382  2.431   2.369  -2.119  N3    NYG   8  
NYG  CA3   CA3   C  0  1  N  N  N  -16.824  -30.883  -27.115  2.461   3.550  -2.962  CA3   NYG   9  
NYG  C     C     C  0  1  N  N  N  -17.366  -29.697  -26.398  2.279   3.125  -4.387  C     NYG  10  
NYG  O     O     O  0  1  N  N  N  -18.205  -29.892  -25.525  2.112   1.984  -4.789  O     NYG  11  
NYG  N2    N2    N  0  1  N  N  N  -14.502  -30.907  -29.823  3.195   0.582  -0.990  N2    NYG  12  
NYG  CA2   CA2   C  0  1  N  N  N  -15.681  -30.836  -30.541  1.836   0.672  -0.809  CA2   NYG  13  
NYG  C2    C2    C  0  1  N  N  N  -16.805  -30.765  -29.606  1.301   1.846  -1.543  C2    NYG  14  
NYG  O2    O2    O  0  1  N  N  N  -17.999  -30.713  -29.865  0.142   2.210  -1.590  O2    NYG  15  
NYG  CB2   CB2   C  0  1  N  N  N  -15.896  -30.826  -31.870  1.071  -0.149  -0.089  CB2   NYG  16  
NYG  CG2   CG2   C  0  1  Y  N  N  -15.021  -30.960  -33.036  1.548  -1.309   0.608  CG2   NYG  17  
NYG  CD2   CD2   C  0  1  Y  N  N  -13.635  -31.086  -32.849  1.618  -2.555  -0.038  CD2   NYG  18  
NYG  CE2   CE2   C  0  1  Y  N  N  -12.764  -31.250  -33.945  2.081  -3.683   0.639  CE2   NYG  19  
NYG  CZ    CZ    C  0  1  Y  N  N  -13.284  -31.371  -35.211  2.482  -3.581   1.971  CZ    NYG  20  
NYG  OH    OH    O  0  1  N  N  N  -12.436  -31.519  -36.324  2.934  -4.682   2.632  OH    NYG  21  
NYG  CE1   CE1   C  0  1  Y  N  N  -14.678  -31.276  -35.411  2.419  -2.352   2.626  CE1   NYG  22  
NYG  CD1   CD1   C  0  1  Y  N  N  -15.521  -31.120  -34.334  1.955  -1.224   1.949  CD1   NYG  23  
NYG  OXT   OXT   O  0  1  N  Y  N  -16.831  -28.516  -26.728  2.325   4.210  -5.203  OXT   NYG  24  
NYG  HD11  1HD1  H  0  0  N  N  N  -12.491  -29.783  -25.993  5.974  -1.887  -1.936  HD11  NYG  25  
NYG  HD12  2HD1  H  0  0  N  N  N  -10.908  -29.984  -25.213  5.143  -2.510  -3.317  HD12  NYG  26  
NYG  HB11  1HB1  H  0  0  N  N  N  -12.177  -31.685  -28.812  6.728   0.880  -2.616  HB11  NYG  27  
NYG  HB12  2HB1  H  0  0  N  N  N  -12.399  -29.871  -28.712  5.812   0.193  -1.270  HB12  NYG  28  
NYG  HA1   HA1   H  0  1  N  N  N  -14.067  -30.217  -26.836  4.800   2.387  -3.201  HA1   NYG  29  
NYG  HN1   1HN   H  0  1  N  N  N  -13.775  -32.953  -27.365  5.489   3.817  -1.575  HN1   NYG  30  
NYG  HN2   2HN   H  0  1  N  N  N  -12.958  -32.154  -26.198  5.795   2.535  -0.428  HN2   NYG  31  
NYG  HA31  1HA3  H  0  0  N  N  N  -17.693  -31.535  -27.289  3.429   4.044  -2.847  HA31  NYG  32  
NYG  HA32  2HA3  H  0  0  N  N  N  -16.006  -31.196  -26.450  1.650   4.221  -2.668  HA32  NYG  33  
NYG  HXT   HXT   H  0  1  N  Y  N  -17.201  -27.835  -26.178  2.208   3.964  -6.146  HXT   NYG  34  
NYG  HB2   HB2   H  0  1  N  N  N  -16.935  -30.690  -32.132  0.002   0.062  -0.048  HB2   NYG  35  
NYG  HD2   HD2   H  0  1  N  N  N  -13.230  -31.057  -31.848  1.309  -2.650  -1.076  HD2   NYG  36  
NYG  HE2   HE2   H  0  1  N  N  N  -11.696  -31.280  -33.791  2.128  -4.638   0.123  HE2   NYG  37  
NYG  HOH   HOH   H  0  1  N  N  N  -12.957  -31.552  -37.118  2.561  -5.487   2.239  HOH   NYG  38  
NYG  HE1   HE1   H  0  1  N  N  N  -15.084  -31.326  -36.411  2.730  -2.266   3.664  HE1   NYG  39  
NYG  HD1   HD1   H  0  1  N  N  N  -16.589  -31.121  -34.493  1.912  -0.272   2.474  HD1   NYG  40  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
NYG  OD1  CG1   DOUB  N  N   1  
NYG  CG1  CB1   SING  N  N   2  
NYG  CG1  ND1   SING  N  N   3  
NYG  ND1  HD11  SING  N  N   4  
NYG  ND1  HD12  SING  N  N   5  
NYG  CB1  CA1   SING  N  N   6  
NYG  CB1  HB11  SING  N  N   7  
NYG  CB1  HB12  SING  N  N   8  
NYG  CA1  C1    SING  N  N   9  
NYG  CA1  N     SING  N  N  10  
NYG  CA1  HA1   SING  N  N  11  
NYG  N    HN1   SING  N  N  12  
NYG  N    HN2   SING  N  N  13  
NYG  C1   N2    DOUB  N  N  14  
NYG  C1   N3    SING  N  N  15  
NYG  N3   C2    SING  N  N  16  
NYG  N3   CA3   SING  N  N  17  
NYG  CA3  C     SING  N  N  18  
NYG  CA3  HA31  SING  N  N  19  
NYG  CA3  HA32  SING  N  N  20  
NYG  C    OXT   SING  N  N  21  
NYG  C    O     DOUB  N  N  22  
NYG  N2   CA2   SING  N  N  23  
NYG  CA2  CB2   DOUB  N  Z  24  
NYG  CA2  C2    SING  N  N  25  
NYG  C2   O2    DOUB  N  N  26  
NYG  CB2  CG2   SING  N  N  27  
NYG  CB2  HB2   SING  N  N  28  
NYG  CG2  CD1   DOUB  Y  N  29  
NYG  CG2  CD2   SING  Y  N  30  
NYG  CD2  CE2   DOUB  Y  N  31  
NYG  CD2  HD2   SING  N  N  32  
NYG  CE2  CZ    SING  Y  N  33  
NYG  CE2  HE2   SING  N  N  34  
NYG  CZ   OH    SING  N  N  35  
NYG  CZ   CE1   DOUB  Y  N  36  
NYG  OH   HOH   SING  N  N  37  
NYG  CE1  CD1   SING  Y  N  38  
NYG  CE1  HE1   SING  N  N  39  
NYG  CD1  HD1   SING  N  N  40  
NYG  OXT  HXT   SING  N  N  41  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
NYG  SMILES            ACDLabs               10.04  "O=C(N)CC(N)C1=N/C(C(=O)N1CC(=O)O)=C\c2ccc(O)cc2"  
NYG  SMILES_CANONICAL  CACTVS                3.341  "N[C@@H](CC(N)=O)C1=N\C(=C/c2ccc(O)cc2)C(=O)N1CC(O)=O"  
NYG  SMILES            CACTVS                3.341  "N[CH](CC(N)=O)C1=NC(=Cc2ccc(O)cc2)C(=O)N1CC(O)=O"  
NYG  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "c1cc(ccc1\C=C/2\C(=O)N(C(=N2)[C@H](CC(=O)N)N)CC(=O)O)O"  
NYG  SMILES            "OpenEye OEToolkits"  1.5.0  "c1cc(ccc1C=C2C(=O)N(C(=N2)C(CC(=O)N)N)CC(=O)O)O"  
NYG  InChI             InChI                 1.03   "InChI=1S/C15H16N4O5/c16-10(6-12(17)21)14-18-11(15(24)19(14)7-13(22)23)5-8-1-3-9(20)4-2-8/h1-5,10,20H,6-7,16H2,(H2,17,21)(H,22,23)/b11-5-/t10-/m0/s1"  
NYG  InChIKey          InChI                 1.03   PASGKYDMGFODGK-QIMWGGGBSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
NYG  "SYSTEMATIC NAME"  ACDLabs               10.04  "{(4Z)-2-[(1S)-1,3-diamino-3-oxopropyl]-4-[(4-hydroxyphenyl)methylidene]-5-oxo-4,5-dihydro-1H-imidazol-1-yl}acetic acid"  
NYG  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "2-[(4Z)-2-[(1S)-1,3-diamino-3-oxo-propyl]-4-[(4-hydroxyphenyl)methylidene]-5-oxo-imidazol-1-yl]ethanoic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
NYG  "Create component"   2007-01-19  RCSB  
NYG  "Modify descriptor"  2011-06-04  RCSB  
NYG  "Modify synonyms"    2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     NYG
_pdbx_chem_comp_synonyms.name        "CHROMOPHORE (ASN-TYR-GLY)"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
