data_PVY
#

_chem_comp.id                                   PVY
_chem_comp.name                                 "9-[2-carboxy-5-({2-[2-(hexyloxy)ethoxy]ethyl}carbamoyl)phenyl]-6-(dimethylamino)-N,N-dimethyl-3H-xanthen-3-iminium"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C35 H44 N3 O6"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   1
_chem_comp.pdbx_initial_date                    2019-08-26
_chem_comp.pdbx_modified_date                   2020-09-25
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       602.740
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    PVY
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6U32
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
PVY  CBO  C1   C  0  1  N  N  N  85.145  54.054   7.474   11.498   4.486  -0.136  CBO  PVY   1  
PVY  CBN  C2   C  0  1  N  N  N  84.372  52.733   7.625   10.923   3.344  -0.977  CBN  PVY   2  
PVY  CBM  C3   C  0  1  N  N  N  83.019  53.092   7.969   10.170   2.371  -0.068  CBM  PVY   3  
PVY  CBL  C4   C  0  1  N  N  N  82.284  51.821   8.465    9.595   1.229  -0.909  CBL  PVY   4  
PVY  CBK  C5   C  0  1  N  N  N  80.874  52.425   8.699    8.842   0.255   0.000  CBK  PVY   5  
PVY  CBJ  C6   C  0  1  N  N  N  79.901  51.621   9.517    8.267  -0.886  -0.840  CBJ  PVY   6  
PVY  OBI  O1   O  0  1  N  N  N  80.268  50.324   9.392    7.563  -1.796   0.009  OBI  PVY   7  
PVY  CBH  C7   C  0  1  N  N  N  80.057  49.385   8.704    6.984  -2.905  -0.681  CBH  PVY   8  
PVY  CBG  C8   C  0  1  N  N  N  78.983  48.391   9.341    6.261  -3.807   0.321  CBG  PVY   9  
PVY  OBF  O2   O  0  1  N  N  N  78.421  47.764   7.949    5.158  -3.098   0.890  OBF  PVY  10  
PVY  CBE  C9   C  0  1  N  N  N  76.999  47.399   7.696    4.411  -3.855   1.844  CBE  PVY  11  
PVY  CBD  C10  C  0  1  N  N  N  76.885  47.039   6.244    3.261  -3.002   2.384  CBD  PVY  12  
PVY  NBB  N1   N  0  1  N  N  N  75.511  46.538   5.998    2.320  -2.707   1.301  NBB  PVY  13  
PVY  CBA  C11  C  0  1  N  N  N  74.442  47.274   5.537    1.223  -1.965   1.545  CBA  PVY  14  
PVY  OBC  O3   O  0  1  N  N  N  74.536  48.448   5.267    1.013  -1.539   2.664  OBC  PVY  15  
PVY  CAQ  C12  C  0  1  Y  N  N  73.153  46.667   5.546    0.272  -1.667   0.450  CAQ  PVY  16  
PVY  CAP  C13  C  0  1  Y  N  N  72.054  47.462   5.814   -0.862  -0.899   0.704  CAP  PVY  17  
PVY  CAR  C14  C  0  1  Y  N  N  72.938  45.310   5.347    0.517  -2.152  -0.837  CAR  PVY  18  
PVY  CAS  C15  C  0  1  Y  N  N  71.612  44.815   5.432   -0.363  -1.879  -1.864  CAS  PVY  19  
PVY  CAT  C16  C  0  1  Y  N  N  70.538  45.701   5.717   -1.504  -1.117  -1.624  CAT  PVY  20  
PVY  CBP  C17  C  0  1  N  N  N  69.219  45.299   5.776   -2.446  -0.825  -2.726  CBP  PVY  21  
PVY  OBR  O4   O  0  1  N  N  N  68.387  45.982   6.445   -2.201  -1.297  -3.964  OBR  PVY  22  
PVY  OBQ  O5   O  0  1  N  N  N  68.906  44.292   5.104   -3.440  -0.160  -2.515  OBQ  PVY  23  
PVY  CAG  C18  C  0  1  Y  N  N  70.737  47.036   5.917   -1.756  -0.620  -0.329  CAG  PVY  24  
PVY  CAC  C19  C  0  1  N  N  N  69.627  47.892   6.232   -2.959   0.192  -0.068  CAC  PVY  25  
PVY  CAB  C20  C  0  1  N  N  N  69.447  48.346   7.541   -2.872   1.586   0.104  CAB  PVY  26  
PVY  CAK  C21  C  0  1  N  N  N  70.138  47.753   8.608   -1.625   2.243   0.032  CAK  PVY  27  
PVY  CAJ  C22  C  0  1  N  N  N  70.032  48.250   9.909   -1.557   3.583   0.201  CAJ  PVY  28  
PVY  CAI  C23  C  0  1  N  N  N  69.243  49.365  10.199   -2.775   4.350   0.457  CAI  PVY  29  
PVY  NAU  N2   N  1  1  N  N  N  69.119  49.805  11.539   -2.705   5.666   0.622  NAU  PVY  30  
PVY  CAW  C24  C  0  1  N  N  N  68.017  50.749  11.842   -1.410   6.346   0.547  CAW  PVY  31  
PVY  CAV  C25  C  0  1  N  N  N  70.039  49.310  12.590   -3.924   6.437   0.879  CAV  PVY  32  
PVY  CAH  C26  C  0  1  N  N  N  68.558  49.993   9.136   -4.023   3.697   0.529  CAH  PVY  33  
PVY  CAA  C27  C  0  1  N  N  N  68.666  49.472   7.847   -4.095   2.345   0.360  CAA  PVY  34  
PVY  OAF  O6   O  0  1  N  N  N  67.997  50.072   6.824   -5.289   1.718   0.429  OAF  PVY  35  
PVY  CAE  C28  C  0  1  Y  N  N  68.179  49.732   5.494   -5.413   0.383   0.269  CAE  PVY  36  
PVY  CAO  C29  C  0  1  Y  N  N  67.598  50.497   4.471   -6.665  -0.208   0.351  CAO  PVY  37  
PVY  CAD  C30  C  0  1  Y  N  N  68.983  48.615   5.203   -4.287  -0.425   0.014  CAD  PVY  38  
PVY  CAL  C31  C  0  1  Y  N  N  69.203  48.311   3.877   -4.437  -1.808  -0.149  CAL  PVY  39  
PVY  CAM  C32  C  0  1  Y  N  N  68.564  49.024   2.857   -5.674  -2.374  -0.061  CAM  PVY  40  
PVY  CAN  C33  C  0  1  Y  N  N  67.754  50.158   3.110   -6.796  -1.580   0.186  CAN  PVY  41  
PVY  NAX  N3   N  0  1  N  N  N  67.160  50.865   2.082   -8.052  -2.168   0.274  NAX  PVY  42  
PVY  CAZ  C34  C  0  1  N  N  N  66.761  52.264   2.307   -8.196  -3.617   0.109  CAZ  PVY  43  
PVY  CAY  C35  C  0  1  N  N  N  67.034  50.291   0.686   -9.232  -1.340   0.533  CAY  PVY  44  
PVY  H1   H1   H  0  1  N  N  N  86.191  53.839   7.210   12.034   5.180  -0.784  H1   PVY  45  
PVY  H2   H2   H  0  1  N  N  N  84.684  54.660   6.680   10.686   5.012   0.366  H2   PVY  46  
PVY  H3   H3   H  0  1  N  N  N  85.113  54.608   8.424   12.182   4.080   0.608  H3   PVY  47  
PVY  H4   H4   H  0  1  N  N  N  84.388  52.172   6.679   10.238   3.750  -1.721  H4   PVY  48  
PVY  H5   H5   H  0  1  N  N  N  84.818  52.120   8.422   11.735   2.818  -1.479  H5   PVY  49  
PVY  H6   H6   H  0  1  N  N  N  83.027  53.850   8.766   10.854   1.965   0.677  H6   PVY  50  
PVY  H7   H7   H  0  1  N  N  N  82.506  53.496   7.084    9.358   2.897   0.434  H7   PVY  51  
PVY  H8   H8   H  0  1  N  N  N  82.271  51.029   7.702    8.910   1.635  -1.653  H8   PVY  52  
PVY  H9   H9   H  0  1  N  N  N  82.723  51.428   9.394   10.407   0.703  -1.411  H9   PVY  53  
PVY  H10  H10  H  0  1  N  N  N  81.010  53.392   9.205    9.527  -0.150   0.745  H10  PVY  54  
PVY  H11  H11  H  0  1  N  N  N  80.418  52.589   7.712    8.030   0.781   0.502  H11  PVY  55  
PVY  H12  H12  H  0  1  N  N  N  79.948  51.928  10.572    7.582  -0.481  -1.585  H12  PVY  56  
PVY  H13  H13  H  0  1  N  N  N  78.878  51.764   9.138    9.079  -1.412  -1.342  H13  PVY  57  
PVY  H14  H14  H  0  1  N  N  N  81.000  48.838   8.555    6.273  -2.541  -1.422  H14  PVY  58  
PVY  H15  H15  H  0  1  N  N  N  79.680  49.737   7.733    7.770  -3.473  -1.180  H15  PVY  59  
PVY  H16  H16  H  0  1  N  N  N  78.203  48.923   9.905    5.895  -4.698  -0.190  H16  PVY  60  
PVY  H17  H17  H  0  1  N  N  N  79.447  47.630   9.986    6.952  -4.099   1.112  H17  PVY  61  
PVY  H18  H18  H  0  1  N  N  N  76.344  48.253   7.925    4.007  -4.747   1.365  H18  PVY  62  
PVY  H19  H19  H  0  1  N  N  N  76.714  46.540   8.321    5.063  -4.148   2.666  H19  PVY  63  
PVY  H20  H20  H  0  1  N  N  N  77.617  46.256   5.996    2.746  -3.546   3.176  H20  PVY  64  
PVY  H21  H21  H  0  1  N  N  N  77.074  47.928   5.624    3.658  -2.069   2.784  H21  PVY  65  
PVY  H22  H22  H  0  1  N  N  N  75.344  45.570   6.185    2.487  -3.047   0.408  H22  PVY  66  
PVY  H23  H23  H  0  1  N  N  N  72.238  48.517   5.957   -1.048  -0.522   1.698  H23  PVY  67  
PVY  H24  H24  H  0  1  N  N  N  73.762  44.646   5.132    1.400  -2.744  -1.029  H24  PVY  68  
PVY  H25  H25  H  0  1  N  N  N  71.418  43.764   5.280   -0.167  -2.257  -2.857  H25  PVY  69  
PVY  H26  H26  H  0  1  N  N  N  67.519  45.608   6.349   -2.845  -1.081  -4.651  H26  PVY  70  
PVY  H27  H27  H  0  1  N  N  N  70.765  46.894   8.420   -0.725   1.675  -0.157  H27  PVY  71  
PVY  H28  H28  H  0  1  N  N  N  70.571  47.762  10.707   -0.603   4.087   0.146  H28  PVY  72  
PVY  H29  H29  H  0  1  N  N  N  68.037  51.006  12.911   -1.217   6.648  -0.482  H29  PVY  73  
PVY  H30  H30  H  0  1  N  N  N  68.142  51.663  11.243   -1.425   7.228   1.188  H30  PVY  74  
PVY  H31  H31  H  0  1  N  N  N  67.053  50.279  11.597   -0.624   5.668   0.880  H31  PVY  75  
PVY  H32  H32  H  0  1  N  N  N  69.776  49.770  13.554   -4.098   6.495   1.954  H32  PVY  76  
PVY  H33  H33  H  0  1  N  N  N  69.951  48.216  12.669   -3.810   7.443   0.475  H33  PVY  77  
PVY  H34  H34  H  0  1  N  N  N  71.073  49.576  12.327   -4.772   5.947   0.400  H34  PVY  78  
PVY  H35  H35  H  0  1  N  N  N  67.955  50.870   9.320   -4.921   4.267   0.719  H35  PVY  79  
PVY  H36  H36  H  0  1  N  N  N  67.016  51.368   4.732   -7.537   0.399   0.542  H36  PVY  80  
PVY  H37  H37  H  0  1  N  N  N  69.880  47.509   3.621   -3.573  -2.426  -0.345  H37  PVY  81  
PVY  H38  H38  H  0  1  N  N  N  68.693  48.697   1.836   -5.788  -3.441  -0.187  H38  PVY  82  
PVY  H39  H39  H  0  1  N  N  N  66.913  52.524   3.365   -8.100  -4.104   1.079  H39  PVY  83  
PVY  H40  H40  H  0  1  N  N  N  67.373  52.926   1.676   -9.175  -3.839  -0.314  H40  PVY  84  
PVY  H41  H41  H  0  1  N  N  N  65.699  52.389   2.048   -7.418  -3.985  -0.561  H41  PVY  85  
PVY  H42  H42  H  0  1  N  N  N  67.371  49.244   0.688   -9.394  -1.263   1.608  H42  PVY  86  
PVY  H43  H43  H  0  1  N  N  N  65.983  50.338   0.364   -9.076  -0.345   0.117  H43  PVY  87  
PVY  H44  H44  H  0  1  N  N  N  67.657  50.875  -0.008  -10.105  -1.796   0.066  H44  PVY  88  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
PVY  CAY  NAX  SING  N  N   1  
PVY  NAX  CAZ  SING  N  N   2  
PVY  NAX  CAN  SING  N  N   3  
PVY  CAM  CAN  DOUB  Y  N   4  
PVY  CAM  CAL  SING  Y  N   5  
PVY  CAN  CAO  SING  Y  N   6  
PVY  CAL  CAD  DOUB  Y  N   7  
PVY  CAO  CAE  DOUB  Y  N   8  
PVY  OBQ  CBP  DOUB  N  N   9  
PVY  CAD  CAE  SING  Y  N  10  
PVY  CAD  CAC  SING  N  N  11  
PVY  OBC  CBA  DOUB  N  N  12  
PVY  CAR  CAS  DOUB  Y  N  13  
PVY  CAR  CAQ  SING  Y  N  14  
PVY  CAS  CAT  SING  Y  N  15  
PVY  CAE  OAF  SING  N  N  16  
PVY  CBA  CAQ  SING  N  N  17  
PVY  CBA  NBB  SING  N  N  18  
PVY  CAQ  CAP  DOUB  Y  N  19  
PVY  CAT  CBP  SING  N  N  20  
PVY  CAT  CAG  DOUB  Y  N  21  
PVY  CBP  OBR  SING  N  N  22  
PVY  CAP  CAG  SING  Y  N  23  
PVY  CAG  CAC  SING  N  N  24  
PVY  NBB  CBD  SING  N  N  25  
PVY  CAC  CAB  DOUB  N  N  26  
PVY  CBD  CBE  SING  N  N  27  
PVY  OAF  CAA  SING  N  N  28  
PVY  CBO  CBN  SING  N  N  29  
PVY  CAB  CAA  SING  N  N  30  
PVY  CAB  CAK  SING  N  N  31  
PVY  CBN  CBM  SING  N  N  32  
PVY  CBE  OBF  SING  N  N  33  
PVY  CAA  CAH  DOUB  N  N  34  
PVY  OBF  CBG  SING  N  N  35  
PVY  CBM  CBL  SING  N  N  36  
PVY  CBL  CBK  SING  N  N  37  
PVY  CAK  CAJ  DOUB  N  N  38  
PVY  CBK  CBJ  SING  N  N  39  
PVY  CBH  CBG  SING  N  N  40  
PVY  CBH  OBI  SING  N  N  41  
PVY  CAH  CAI  SING  N  N  42  
PVY  OBI  CBJ  SING  N  N  43  
PVY  CAJ  CAI  SING  N  N  44  
PVY  CAI  NAU  DOUB  N  N  45  
PVY  NAU  CAW  SING  N  N  46  
PVY  NAU  CAV  SING  N  N  47  
PVY  CBO  H1   SING  N  N  48  
PVY  CBO  H2   SING  N  N  49  
PVY  CBO  H3   SING  N  N  50  
PVY  CBN  H4   SING  N  N  51  
PVY  CBN  H5   SING  N  N  52  
PVY  CBM  H6   SING  N  N  53  
PVY  CBM  H7   SING  N  N  54  
PVY  CBL  H8   SING  N  N  55  
PVY  CBL  H9   SING  N  N  56  
PVY  CBK  H10  SING  N  N  57  
PVY  CBK  H11  SING  N  N  58  
PVY  CBJ  H12  SING  N  N  59  
PVY  CBJ  H13  SING  N  N  60  
PVY  CBH  H14  SING  N  N  61  
PVY  CBH  H15  SING  N  N  62  
PVY  CBG  H16  SING  N  N  63  
PVY  CBG  H17  SING  N  N  64  
PVY  CBE  H18  SING  N  N  65  
PVY  CBE  H19  SING  N  N  66  
PVY  CBD  H20  SING  N  N  67  
PVY  CBD  H21  SING  N  N  68  
PVY  NBB  H22  SING  N  N  69  
PVY  CAP  H23  SING  N  N  70  
PVY  CAR  H24  SING  N  N  71  
PVY  CAS  H25  SING  N  N  72  
PVY  OBR  H26  SING  N  N  73  
PVY  CAK  H27  SING  N  N  74  
PVY  CAJ  H28  SING  N  N  75  
PVY  CAW  H29  SING  N  N  76  
PVY  CAW  H30  SING  N  N  77  
PVY  CAW  H31  SING  N  N  78  
PVY  CAV  H32  SING  N  N  79  
PVY  CAV  H33  SING  N  N  80  
PVY  CAV  H34  SING  N  N  81  
PVY  CAH  H35  SING  N  N  82  
PVY  CAO  H36  SING  N  N  83  
PVY  CAL  H37  SING  N  N  84  
PVY  CAM  H38  SING  N  N  85  
PVY  CAZ  H39  SING  N  N  86  
PVY  CAZ  H40  SING  N  N  87  
PVY  CAZ  H41  SING  N  N  88  
PVY  CAY  H42  SING  N  N  89  
PVY  CAY  H43  SING  N  N  90  
PVY  CAY  H44  SING  N  N  91  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
PVY  SMILES            ACDLabs               12.01  "CCCCCCOCCOCCNC(c1cc(c(cc1)C(O)=O)C3=C2C(=CC(/C=C2)=[N+](\C)C)Oc4cc(ccc34)N(C)C)=O"  
PVY  InChI             InChI                 1.03   "InChI=1S/C35H43N3O6/c1-6-7-8-9-17-42-19-20-43-18-16-36-34(39)24-10-13-27(35(40)41)30(21-24)33-28-14-11-25(37(2)3)22-31(28)44-32-23-26(38(4)5)12-15-29(32)33/h10-15,21-23H,6-9,16-20H2,1-5H3,(H-,36,39,40,41)/p+1"  
PVY  InChIKey          InChI                 1.03   HKVFTIWQXRNXNR-UHFFFAOYSA-O  
PVY  SMILES_CANONICAL  CACTVS                3.385  "CCCCCCOCCOCCNC(=O)c1ccc(C(O)=O)c(c1)C2=C3C=CC(C=C3Oc4cc(ccc24)N(C)C)=[N+](C)C"  
PVY  SMILES            CACTVS                3.385  "CCCCCCOCCOCCNC(=O)c1ccc(C(O)=O)c(c1)C2=C3C=CC(C=C3Oc4cc(ccc24)N(C)C)=[N+](C)C"  
PVY  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CCCCCCOCCOCCNC(=O)c1ccc(c(c1)C2=C3C=CC(=[N+](C)C)C=C3Oc4c2ccc(c4)N(C)C)C(=O)O"  
PVY  SMILES            "OpenEye OEToolkits"  2.0.7  "CCCCCCOCCOCCNC(=O)c1ccc(c(c1)C2=C3C=CC(=[N+](C)C)C=C3Oc4c2ccc(c4)N(C)C)C(=O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
PVY  "SYSTEMATIC NAME"  ACDLabs               12.01  "9-[2-carboxy-5-({2-[2-(hexyloxy)ethoxy]ethyl}carbamoyl)phenyl]-6-(dimethylamino)-N,N-dimethyl-3H-xanthen-3-iminium"  
PVY  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "[9-[2-carboxy-5-[2-(2-hexoxyethoxy)ethylcarbamoyl]phenyl]-6-(dimethylamino)xanthen-3-ylidene]-dimethyl-azanium"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
PVY  "Create component"  2019-08-26  RCSB  
PVY  "Initial release"   2020-09-30  RCSB  
##
