data_Q3P
#

_chem_comp.id                                   Q3P
_chem_comp.name                                 N~6~-glycyl-L-lysine
_chem_comp.type                                 "L-peptide linking"
_chem_comp.pdbx_type                            ATOMP
_chem_comp.formula                              "C8 H17 N3 O3"
_chem_comp.mon_nstd_parent_comp_id              LYS
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-09-16
_chem_comp.pdbx_modified_date                   2019-10-18
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       203.239
_chem_comp.one_letter_code                      K
_chem_comp.three_letter_code                    Q3P
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6UC1
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
Q3P  C1    C1   C  0  1  N  N  N   -5.994  -54.304  245.576  -4.052   0.030  -0.023  C1    Q3P   1  
Q3P  C4    C2   C  0  1  N  N  N   -5.774  -53.002  246.318  -5.246   0.798   0.484  C4    Q3P   2  
Q3P  N     N1   N  0  1  N  N  N   -9.937  -59.599  242.779   3.384  -1.766   0.267  N     Q3P   3  
Q3P  CA    C3   C  0  1  N  N  S  -10.807  -59.045  243.869   3.348  -0.442  -0.368  CA    Q3P   4  
Q3P  C     C4   C  0  1  N  N  N  -12.166  -58.696  243.334   4.609   0.311  -0.031  C     Q3P   5  
Q3P  O     O1   O  0  1  N  N  N  -12.378  -58.741  242.088   5.273  -0.018   0.924  O     Q3P   6  
Q3P  CB    C5   C  0  1  N  N  N  -10.207  -57.819  244.505   2.136   0.337   0.147  CB    Q3P   7  
Q3P  CG    C6   C  0  1  N  N  N   -8.854  -58.146  245.148   0.851  -0.362  -0.303  CG    Q3P   8  
Q3P  CD    C7   C  0  1  N  N  N   -8.236  -56.884  245.795  -0.361   0.417   0.211  CD    Q3P   9  
Q3P  CE    C8   C  0  1  N  N  N   -7.588  -55.951  244.769  -1.645  -0.283  -0.239  CE    Q3P  10  
Q3P  NZ    N2   N  0  1  N  N  N   -7.265  -54.627  245.291  -2.806   0.463   0.254  NZ    Q3P  11  
Q3P  N5    N3   N  0  1  N  N  N   -6.798  -52.760  247.384  -6.479   0.126   0.052  N5    Q3P  12  
Q3P  O2    O2   O  0  1  N  N  N   -5.027  -55.004  245.265  -4.212  -0.980  -0.674  O2    Q3P  13  
Q3P  OXT   O3   O  0  1  N  Y  N  -13.091  -58.330  244.216   4.995   1.348  -0.791  O1    Q3P  14  
Q3P  H4    H1   H  0  1  N  N  N   -4.779  -53.028  246.786  -5.216   0.839   1.573  H4    Q3P  15  
Q3P  H41   H2   H  0  1  N  N  N   -5.817  -52.174  245.595  -5.224   1.811   0.082  H41   Q3P  16  
Q3P  H2    H3   H  0  1  N  N  N   -9.037  -59.826  243.153   3.454  -1.684   1.271  H2    Q3P  17  
Q3P  H1    H4   H  0  1  N  N  N  -10.359  -60.424  242.403   2.579  -2.315   0.004  H1    Q3P  18  
Q3P  HA    H6   H  0  1  N  N  N  -10.926  -59.815  244.645   3.273  -0.559  -1.449  HA    Q3P  19  
Q3P  HB3   H7   H  0  1  N  N  N  -10.063  -57.047  243.735   2.165   0.378   1.235  HB3   Q3P  20  
Q3P  HB2   H8   H  0  1  N  N  N  -10.892  -57.442  245.279   2.158   1.350  -0.256  HB2   Q3P  21  
Q3P  HG3   H9   H  0  1  N  N  N   -8.998  -58.914  245.922   0.822  -0.403  -1.392  HG3   Q3P  22  
Q3P  HG2   H10  H  0  1  N  N  N   -8.170  -58.527  244.376   0.830  -1.375   0.099  HG2   Q3P  23  
Q3P  HD3   H11  H  0  1  N  N  N   -7.469  -57.199  246.518  -0.331   0.458   1.300  HD3   Q3P  24  
Q3P  HD2   H12  H  0  1  N  N  N   -9.030  -56.333  246.320  -0.339   1.430  -0.191  HD2   Q3P  25  
Q3P  HE3   H13  H  0  1  N  N  N   -8.282  -55.830  243.925  -1.674  -0.323  -1.328  HE3   Q3P  26  
Q3P  HE2   H14  H  0  1  N  N  N   -6.658  -56.419  244.415  -1.667  -1.296   0.163  HE2   Q3P  27  
Q3P  HZ3   H15  H  0  1  N  N  N   -7.994  -53.958  245.437  -2.677   1.269   0.778  HZ3   Q3P  28  
Q3P  HN5   H16  H  0  1  N  N  N   -6.606  -51.891  247.840  -6.493  -0.835   0.358  HN5   Q3P  29  
Q3P  HN51  H17  H  0  0  N  N  N   -7.708  -52.726  246.970  -7.294   0.622   0.379  HN51  Q3P  30  
Q3P  HXT   H19  H  0  1  N  N  N  -13.898  -58.120  243.761   5.811   1.800  -0.536  H5    Q3P  31  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
Q3P  O    C     DOUB  N  N   1  
Q3P  N    CA    SING  N  N   2  
Q3P  C    CA    SING  N  N   3  
Q3P  CA   CB    SING  N  N   4  
Q3P  CB   CG    SING  N  N   5  
Q3P  CE   NZ    SING  N  N   6  
Q3P  CE   CD    SING  N  N   7  
Q3P  CG   CD    SING  N  N   8  
Q3P  O2   C1    DOUB  N  N   9  
Q3P  NZ   C1    SING  N  N  10  
Q3P  C1   C4    SING  N  N  11  
Q3P  C4   N5    SING  N  N  12  
Q3P  C    OXT   SING  N  N  13  
Q3P  C4   H4    SING  N  N  14  
Q3P  C4   H41   SING  N  N  15  
Q3P  N    H2    SING  N  N  16  
Q3P  N    H1    SING  N  N  17  
Q3P  CA   HA    SING  N  N  18  
Q3P  CB   HB3   SING  N  N  19  
Q3P  CB   HB2   SING  N  N  20  
Q3P  CG   HG3   SING  N  N  21  
Q3P  CG   HG2   SING  N  N  22  
Q3P  CD   HD3   SING  N  N  23  
Q3P  CD   HD2   SING  N  N  24  
Q3P  CE   HE3   SING  N  N  25  
Q3P  CE   HE2   SING  N  N  26  
Q3P  NZ   HZ3   SING  N  N  27  
Q3P  N5   HN5   SING  N  N  28  
Q3P  N5   HN51  SING  N  N  29  
Q3P  OXT  HXT   SING  N  N  30  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
Q3P  SMILES            ACDLabs               12.01  "C(CN)(NCCCCC(N)C(O)=O)=O"  
Q3P  InChI             InChI                 1.03   "InChI=1S/C8H17N3O3/c9-5-7(12)11-4-2-1-3-6(10)8(13)14/h6H,1-5,9-10H2,(H,11,12)(H,13,14)/t6-/m0/s1"  
Q3P  InChIKey          InChI                 1.03   YOYBPHLYMUAKGZ-LURJTMIESA-N  
Q3P  SMILES_CANONICAL  CACTVS                3.385  "NCC(=O)NCCCC[C@H](N)C(O)=O"  
Q3P  SMILES            CACTVS                3.385  "NCC(=O)NCCCC[CH](N)C(O)=O"  
Q3P  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "C(CCNC(=O)CN)C[C@@H](C(=O)O)N"  
Q3P  SMILES            "OpenEye OEToolkits"  2.0.7  "C(CCNC(=O)CN)CC(C(=O)O)N"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
Q3P  "SYSTEMATIC NAME"  ACDLabs               12.01  N~6~-glycyl-L-lysine  
Q3P  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "(2~{S})-2-azanyl-6-(2-azanylethanoylamino)hexanoic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
Q3P  "Create component"  2019-09-16  RCSB  
Q3P  "Initial release"   2019-10-23  RCSB  
##
