data_Q7O
# 
_chem_comp.id                                    Q7O 
_chem_comp.name                                  "(2R,4R)-2-[(2S,3R)-1,3-bis(oxidanyl)-1-oxidanylidene-butan-2-yl]-4-(2-methanimidamidoethylsulfanyl)-3,4-dihydro-2H-pyrrole-5-carboxylic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C12 H19 N3 O5 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "Hydrolyzed Imipenem" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-10-14 
_chem_comp.pdbx_modified_date                    2023-03-03 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        317.361 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     Q7O 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8AKK 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
Q7O C62  C1  C 0 1 N N N 12.472 8.746  22.694 5.088  1.780  -0.363 C62  Q7O 1  
Q7O C61  C2  C 0 1 N N R 13.853 9.378  22.961 4.201  0.800  0.409  C61  Q7O 2  
Q7O O62  O1  O 0 1 N N N 14.569 8.565  23.862 4.611  0.762  1.777  O62  Q7O 3  
Q7O C6   C3  C 0 1 N N S 14.668 9.512  21.650 2.743  1.257  0.326  C6   Q7O 4  
Q7O C7   C4  C 0 1 N N N 14.008 10.590 20.839 2.311  1.297  -1.117 C7   Q7O 5  
Q7O O71  O3  O 0 1 N N N 13.664 10.446 19.678 1.388  0.612  -1.490 O71  Q7O 6  
Q7O C5   C5  C 0 1 N N R 16.139 9.870  21.883 1.857  0.277  1.097  C5   Q7O 7  
Q7O C1   C6  C 0 1 N N N 17.135 8.682  22.018 0.377  0.721  1.026  C1   Q7O 8  
Q7O N4   N1  N 0 1 N N N 16.627 10.675 20.750 1.889  -1.046 0.464  N4   Q7O 9  
Q7O C3   C7  C 0 1 N N N 17.571 10.057 20.164 0.731  -1.566 0.359  C3   Q7O 10 
Q7O C31  C8  C 0 1 N N N 18.311 10.734 19.048 0.461  -2.896 -0.238 C31  Q7O 11 
Q7O O31  O4  O 0 1 N N N 17.542 11.373 18.296 -0.661 -3.357 -0.210 O31  Q7O 12 
Q7O O32  O5  O 0 1 N N N 19.546 10.593 19.034 1.461  -3.592 -0.811 O32  Q7O 13 
Q7O C2   C9  C 0 1 N N R 18.168 8.859  20.867 -0.333 -0.651 0.923  C2   Q7O 14 
Q7O S21  S1  S 0 1 N N N 18.238 7.378  19.721 -1.750 -0.551 -0.205 S21  Q7O 15 
Q7O C22  C10 C 0 1 N N N 17.966 5.773  20.603 -2.957 0.418  0.740  C22  Q7O 16 
Q7O C23  C11 C 0 1 N N N 18.992 5.676  21.736 -4.275 0.488  -0.035 C23  Q7O 17 
Q7O N24  N2  N 0 1 N N N 19.602 4.324  21.850 -5.249 1.271  0.729  N24  Q7O 18 
Q7O C25  C12 C 0 1 N N N 18.860 3.149  22.046 -6.510 1.470  0.230  C25  Q7O 19 
Q7O N26  N3  N 0 1 N N N 17.561 3.222  22.134 -6.839 0.967  -0.915 N26  Q7O 20 
Q7O H1   H1  H 0 1 N N N 11.917 8.663  23.640 6.126  1.454  -0.304 H1   Q7O 21 
Q7O H4   H4  H 0 1 N N N 13.704 10.382 23.384 4.295  -0.195 -0.026 H4   Q7O 22 
Q7O H5   H5  H 0 1 N N N 14.077 8.477  24.670 4.554  1.616  2.228  H5   Q7O 23 
Q7O H6   H6  H 0 1 N N N 14.615 8.560  21.102 2.649  2.252  0.761  H6   Q7O 24 
Q7O H8   H8  H 0 1 N N N 16.204 10.471 22.802 2.182  0.210  2.135  H8   Q7O 25 
Q7O H10  H9  H 0 1 N N N 16.605 7.724  21.912 0.081  1.250  1.932  H10  Q7O 26 
Q7O H9   H10 H 0 1 N N N 17.640 8.715  22.994 0.191  1.329  0.140  H9   Q7O 27 
Q7O H11  H11 H 0 1 N N N 19.912 11.077 18.303 1.237  -4.454 -1.187 H11  Q7O 28 
Q7O H131 H12 H 0 0 N N N 19.183 9.049  21.247 -0.650 -0.993 1.908  H131 Q7O 29 
Q7O H14  H13 H 0 1 N N N 16.948 5.743  21.018 -3.129 -0.057 1.706  H14  Q7O 30 
Q7O H13  H14 H 0 1 N N N 18.102 4.935  19.904 -2.573 1.426  0.895  H13  Q7O 31 
Q7O H15  H15 H 0 1 N N N 19.792 6.407  21.549 -4.103 0.963  -1.000 H15  Q7O 32 
Q7O H16  H16 H 0 1 N N N 18.491 5.916  22.685 -4.659 -0.520 -0.189 H16  Q7O 33 
Q7O H20  H17 H 0 1 N N N 20.597 4.248  21.783 -5.003 1.648  1.588  H20  Q7O 34 
Q7O H17  H18 H 0 1 N N N 19.359 2.195  22.123 -7.228 2.047  0.793  H17  Q7O 35 
Q7O H18  H19 H 0 1 N N N 17.144 2.324  22.273 -7.731 1.108  -1.268 H18  Q7O 36 
Q7O O1   O6  O 0 1 N Y N ?      ?      ?      2.950  2.093  -1.988 O1   Q7O 37 
Q7O H7   H7  H 0 1 N Y N ?      ?      ?      2.637  2.085  -2.903 H7   Q7O 38 
Q7O H2   H2  H 0 1 N N N 11.909 9.379  21.993 4.775  1.809  -1.406 H2   Q7O 39 
Q7O H3   H3  H 0 1 N N N 12.605 7.745  22.259 4.993  2.775  0.072  H3   Q7O 40 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
Q7O O31 C31  DOUB N N 1  
Q7O O32 C31  SING N N 2  
Q7O C31 C3   SING N N 3  
Q7O O71 C7   DOUB N N 4  
Q7O S21 C22  SING N N 5  
Q7O S21 C2   SING N N 6  
Q7O C3  N4   DOUB N N 7  
Q7O C3  C2   SING N N 8  
Q7O C22 C23  SING N N 9  
Q7O N4  C5   SING N N 10 
Q7O C7  C6   SING N N 11 
Q7O C2  C1   SING N N 12 
Q7O C6  C5   SING N N 13 
Q7O C6  C61  SING N N 14 
Q7O C23 N24  SING N N 15 
Q7O N24 C25  SING N N 16 
Q7O C5  C1   SING N N 17 
Q7O C25 N26  DOUB N N 18 
Q7O C62 C61  SING N N 19 
Q7O C61 O62  SING N N 20 
Q7O C62 H1   SING N N 21 
Q7O C61 H4   SING N N 22 
Q7O O62 H5   SING N N 23 
Q7O C6  H6   SING N N 24 
Q7O C5  H8   SING N N 25 
Q7O C1  H10  SING N N 26 
Q7O C1  H9   SING N N 27 
Q7O O32 H11  SING N N 28 
Q7O C2  H131 SING N N 29 
Q7O C22 H14  SING N N 30 
Q7O C22 H13  SING N N 31 
Q7O C23 H15  SING N N 32 
Q7O C23 H16  SING N N 33 
Q7O N24 H20  SING N N 34 
Q7O C25 H17  SING N N 35 
Q7O N26 H18  SING N N 36 
Q7O C7  O1   SING N N 37 
Q7O O1  H7   SING N N 38 
Q7O C62 H2   SING N N 39 
Q7O C62 H3   SING N N 40 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
Q7O InChI            InChI                1.06    "InChI=1S/C12H19N3O5S/c1-6(16)9(11(17)18)7-4-8(10(15-7)12(19)20)21-3-2-14-5-13/h5-9,16H,2-4H2,1H3,(H2,13,14)(H,17,18)(H,19,20)/t6-,7-,8-,9-/m1/s1" 
Q7O InChIKey         InChI                1.06    GGEWNUMDSNUHAH-FNCVBFRFSA-N                                                                                                                        
Q7O SMILES_CANONICAL CACTVS               3.385   "C[C@@H](O)[C@H]([C@H]1C[C@@H](SCCNC=N)C(=N1)C(O)=O)C(O)=O"                                                                                        
Q7O SMILES           CACTVS               3.385   "C[CH](O)[CH]([CH]1C[CH](SCCNC=N)C(=N1)C(O)=O)C(O)=O"                                                                                              
Q7O SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "[H]/N=C/NCCS[C@@H]1C[C@@H](N=C1C(=O)O)[C@@H]([C@@H](C)O)C(=O)O"                                                                                   
Q7O SMILES           "OpenEye OEToolkits" 3.1.0.0 "CC(C(C1CC(C(=N1)C(=O)O)SCCNC=N)C(=O)O)O"                                                                                                          
# 
_pdbx_chem_comp_identifier.comp_id           Q7O 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   3.1.0.0 
_pdbx_chem_comp_identifier.identifier        "(2~{R},4~{R})-2-[(2~{S},3~{R})-1,3-bis(oxidanyl)-1-oxidanylidene-butan-2-yl]-4-(2-methanimidamidoethylsulfanyl)-3,4-dihydro-2~{H}-pyrrole-5-carboxylic acid" 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      Q7O 
_pdbx_chem_comp_synonyms.name         "Hydrolyzed Imipenem" 
_pdbx_chem_comp_synonyms.provenance   AUTHOR 
_pdbx_chem_comp_synonyms.type         ? 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
Q7O "Create component" 2022-10-14 PDBE 
Q7O "Modify formula"   2022-10-18 PDBE 
Q7O "Modify formula"   2022-11-30 PDBE 
Q7O "Initial release"  2023-03-08 RCSB 
# 
