data_Q9D
#

_chem_comp.id                                   Q9D
_chem_comp.name                                 "benzyl [(2S)-1-(3-nitrophenyl)-3-oxobutan-2-yl]carbamate"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C18 H18 N2 O5"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-10-07
_chem_comp.pdbx_modified_date                   2020-09-04
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       342.346
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    Q9D
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6UKD
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
Q9D  C22  C1   C   0  1  Y  N  N  -27.853   -9.932  13.159  -3.157  -2.415   0.918  C22  Q9D   1  
Q9D  C24  C2   C   0  1  Y  N  N  -26.324  -10.187  14.978  -1.846  -0.640   1.845  C24  Q9D   2  
Q9D  C28  C3   C   0  1  N  N  N  -23.230  -15.580  11.749   3.162   0.058  -1.158  C28  Q9D   3  
Q9D  C02  C4   C   0  1  N  N  N  -23.928  -14.066  13.387   1.092   1.014  -0.452  C02  Q9D   4  
Q9D  C04  C5   C   0  1  N  N  S  -24.515  -12.707  15.430  -1.050   2.037   0.098  C04  Q9D   5  
Q9D  C05  C6   C   0  1  N  N  N  -25.860  -12.407  16.070  -2.157   1.733   1.110  C05  Q9D   6  
Q9D  C06  C7   C   0  1  Y  N  N  -26.592  -11.550  15.036  -2.510   0.270   1.043  C06  Q9D   7  
Q9D  C07  C8   C   0  1  Y  N  N  -27.484  -12.117  14.144  -3.499  -0.163   0.180  C07  Q9D   8  
Q9D  C08  C9   C   0  1  Y  N  N  -28.117  -11.291  13.215  -3.822  -1.506   0.117  C08  Q9D   9  
Q9D  C23  C10  C   0  1  Y  N  N  -26.954   -9.370  14.050  -2.169  -1.982   1.782  C23  Q9D  10  
Q9D  C25  C11  C   0  1  N  N  N  -23.487  -13.046  16.490  -0.782   3.520   0.078  C25  Q9D  11  
Q9D  C29  C12  C   0  1  Y  N  N  -23.908  -16.685  10.958   4.347  -0.671  -0.579  C29  Q9D  12  
Q9D  C30  C13  C   0  1  Y  N  N  -24.196  -16.497   9.629   5.437   0.041  -0.115  C30  Q9D  13  
Q9D  C31  C14  C   0  1  Y  N  N  -24.834  -17.512   8.898   6.522  -0.627   0.421  C31  Q9D  14  
Q9D  C32  C15  C   0  1  Y  N  N  -25.174  -18.699   9.516   6.516  -2.008   0.494  C32  Q9D  15  
Q9D  C33  C16  C   0  1  Y  N  N  -24.886  -18.871  10.864   5.426  -2.720   0.030  C33  Q9D  16  
Q9D  C34  C17  C   0  1  Y  N  N  -24.266  -17.868  11.587   4.341  -2.051  -0.507  C34  Q9D  17  
Q9D  C56  C18  C   0  1  N  N  N  -23.337  -14.494  16.923  -1.752   4.452  -0.601  C56  Q9D  18  
Q9D  N03  N1   N   0  1  N  N  N  -24.723  -13.851  14.554   0.171   1.325   0.482  N03  Q9D  19  
Q9D  N09  N2   N   1  1  N  N  N  -29.065  -11.853  12.275  -4.880  -1.970  -0.809  N09  Q9D  20  
Q9D  O01  O1   O   0  1  N  N  N  -23.145  -13.277  12.972   0.909   1.325  -1.612  O01  Q9D  21  
Q9D  O27  O2   O   0  1  N  N  N  -24.142  -15.283  12.763   2.215   0.360  -0.099  O27  Q9D  22  
Q9D  O41  O3   O   0  1  N  N  N  -29.376  -13.223  12.349  -5.164  -3.153  -0.865  O41  Q9D  23  
Q9D  O47  O4   O  -1  1  N  N  N  -29.649  -11.022  11.301  -5.466  -1.169  -1.515  O47  Q9D  24  
Q9D  O52  O5   O   0  1  N  N  N  -22.839  -12.191  16.992   0.211   3.961   0.605  O52  Q9D  25  
Q9D  H1   H1   H   0  1  N  N  N  -28.346   -9.314  12.424  -3.413  -3.464   0.872  H1   Q9D  26  
Q9D  H2   H2   H   0  1  N  N  N  -25.613   -9.756  15.667  -1.074  -0.301   2.520  H2   Q9D  27  
Q9D  H3   H3   H   0  1  N  N  N  -22.276  -15.930  12.171   3.497   0.986  -1.621  H3   Q9D  28  
Q9D  H4   H4   H   0  1  N  N  N  -23.050  -14.699  11.115   2.681  -0.569  -1.908  H4   Q9D  29  
Q9D  H5   H5   H   0  1  N  N  N  -24.178  -11.834  14.852  -1.365   1.711  -0.893  H5   Q9D  30  
Q9D  H6   H6   H   0  1  N  N  N  -25.728  -11.853  17.011  -1.808   1.977   2.114  H6   Q9D  31  
Q9D  H7   H7   H   0  1  N  N  N  -26.413  -13.337  16.266  -3.037   2.331   0.876  H7   Q9D  32  
Q9D  H8   H8   H   0  1  N  N  N  -27.686  -13.178  14.166  -4.018   0.547  -0.447  H8   Q9D  33  
Q9D  H9   H9   H   0  1  N  N  N  -26.746   -8.311  14.023  -1.650  -2.692   2.409  H9   Q9D  34  
Q9D  H10  H10  H   0  1  N  N  N  -23.932  -15.568   9.146   5.441   1.120  -0.171  H10  Q9D  35  
Q9D  H11  H11  H   0  1  N  N  N  -25.059  -17.364   7.852   7.374  -0.071   0.784  H11  Q9D  36  
Q9D  H12  H12  H   0  1  N  N  N  -25.659  -19.486   8.957   7.364  -2.530   0.912  H12  Q9D  37  
Q9D  H13  H13  H   0  1  N  N  N  -25.149  -19.798  11.353   5.421  -3.798   0.087  H13  Q9D  38  
Q9D  H14  H14  H   0  1  N  N  N  -24.061  -18.006  12.638   3.488  -2.607  -0.865  H14  Q9D  39  
Q9D  H15  H15  H   0  1  N  N  N  -22.578  -14.563  17.717  -2.579   3.876  -1.016  H15  Q9D  40  
Q9D  H16  H16  H   0  1  N  N  N  -24.300  -14.864  17.303  -2.136   5.168   0.124  H16  Q9D  41  
Q9D  H17  H17  H   0  1  N  N  N  -23.024  -15.103  16.062  -1.242   4.985  -1.404  H17  Q9D  42  
Q9D  H18  H18  H   0  1  N  N  N  -25.445  -14.507  14.776   0.318   1.077   1.408  H18  Q9D  43  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
Q9D  C31  C32  DOUB  Y  N   1  
Q9D  C31  C30  SING  Y  N   2  
Q9D  C32  C33  SING  Y  N   3  
Q9D  C30  C29  DOUB  Y  N   4  
Q9D  C33  C34  DOUB  Y  N   5  
Q9D  C29  C34  SING  Y  N   6  
Q9D  C29  C28  SING  N  N   7  
Q9D  O47  N09  SING  N  N   8  
Q9D  C28  O27  SING  N  N   9  
Q9D  N09  O41  DOUB  N  N  10  
Q9D  N09  C08  SING  N  N  11  
Q9D  O27  C02  SING  N  N  12  
Q9D  O01  C02  DOUB  N  N  13  
Q9D  C22  C08  DOUB  Y  N  14  
Q9D  C22  C23  SING  Y  N  15  
Q9D  C08  C07  SING  Y  N  16  
Q9D  C02  N03  SING  N  N  17  
Q9D  C23  C24  DOUB  Y  N  18  
Q9D  C07  C06  DOUB  Y  N  19  
Q9D  N03  C04  SING  N  N  20  
Q9D  C24  C06  SING  Y  N  21  
Q9D  C06  C05  SING  N  N  22  
Q9D  C04  C05  SING  N  N  23  
Q9D  C04  C25  SING  N  N  24  
Q9D  C25  C56  SING  N  N  25  
Q9D  C25  O52  DOUB  N  N  26  
Q9D  C22  H1   SING  N  N  27  
Q9D  C24  H2   SING  N  N  28  
Q9D  C28  H3   SING  N  N  29  
Q9D  C28  H4   SING  N  N  30  
Q9D  C04  H5   SING  N  N  31  
Q9D  C05  H6   SING  N  N  32  
Q9D  C05  H7   SING  N  N  33  
Q9D  C07  H8   SING  N  N  34  
Q9D  C23  H9   SING  N  N  35  
Q9D  C30  H10  SING  N  N  36  
Q9D  C31  H11  SING  N  N  37  
Q9D  C32  H12  SING  N  N  38  
Q9D  C33  H13  SING  N  N  39  
Q9D  C34  H14  SING  N  N  40  
Q9D  C56  H15  SING  N  N  41  
Q9D  C56  H16  SING  N  N  42  
Q9D  C56  H17  SING  N  N  43  
Q9D  N03  H18  SING  N  N  44  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
Q9D  SMILES            ACDLabs               12.01  "c1c(cc(cc1)CC(C(C)=O)NC(=O)OCc2ccccc2)[N+](=O)[O-]"  
Q9D  InChI             InChI                 1.03   "InChI=1S/C18H18N2O5/c1-13(21)17(11-15-8-5-9-16(10-15)20(23)24)19-18(22)25-12-14-6-3-2-4-7-14/h2-10,17H,11-12H2,1H3,(H,19,22)/t17-/m0/s1"  
Q9D  InChIKey          InChI                 1.03   XMNMBBOQTUQLRM-KRWDZBQOSA-N  
Q9D  SMILES_CANONICAL  CACTVS                3.385  "CC(=O)[C@H](Cc1cccc(c1)[N+]([O-])=O)NC(=O)OCc2ccccc2"  
Q9D  SMILES            CACTVS                3.385  "CC(=O)[CH](Cc1cccc(c1)[N+]([O-])=O)NC(=O)OCc2ccccc2"  
Q9D  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CC(=O)[C@H](Cc1cccc(c1)[N+](=O)[O-])NC(=O)OCc2ccccc2"  
Q9D  SMILES            "OpenEye OEToolkits"  2.0.7  "CC(=O)C(Cc1cccc(c1)[N+](=O)[O-])NC(=O)OCc2ccccc2"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
Q9D  "SYSTEMATIC NAME"  ACDLabs               12.01  "benzyl [(2S)-1-(3-nitrophenyl)-3-oxobutan-2-yl]carbamate"  
Q9D  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "(phenylmethyl) ~{N}-[(2~{S})-1-(3-nitrophenyl)-3-oxidanylidene-butan-2-yl]carbamate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
Q9D  "Create component"  2019-10-07  RCSB  
Q9D  "Initial release"   2020-09-09  RCSB  
##
