data_R7D
#

_chem_comp.id                                   R7D
_chem_comp.name                                 "N~2~-{(2R)-2-hydroxy-2-[4-(trifluoromethyl)phenyl]acetyl}-N-[(pyridin-2-yl)methyl]-L-cysteinamide"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C18 H18 F3 N3 O3 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-02-04
_chem_comp.pdbx_modified_date                   2020-07-31
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       413.414
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    R7D
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6VPL
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
R7D  SD   S1   S  0  1  N  N  N  -2.634   -9.254  -26.800   0.012  -1.154  -2.424  SD   R7D   1  
R7D  CE   C1   C  0  1  N  N  N  -2.890  -10.029  -28.454   1.161  -0.244  -1.356  CE   R7D   2  
R7D  CAA  C2   C  0  1  N  N  R  -5.468   -6.146  -28.804  -2.003  -2.429   1.018  CAA  R7D   3  
R7D  CAB  C3   C  0  1  N  N  N  -4.146   -6.819  -29.176  -0.691  -2.243   0.301  CAB  R7D   4  
R7D  CAM  C4   C  0  1  N  N  N  -4.356   -9.904  -33.003   4.520   0.740   1.248  CAM  R7D   5  
R7D  CAN  C5   C  0  1  Y  N  N  -5.307  -10.918  -33.007   5.832   0.927   0.530  CAN  R7D   6  
R7D  CAP  C6   C  0  1  Y  N  N  -6.615  -12.548  -31.867   7.902   0.092  -0.038  CAP  R7D   7  
R7D  CAQ  C7   C  0  1  Y  N  N  -7.201  -12.947  -33.061   8.210   1.234  -0.754  CAQ  R7D   8  
R7D  CAR  C8   C  0  1  Y  N  N  -6.827  -12.323  -34.246   7.281   2.261  -0.818  CAR  R7D   9  
R7D  CAS  C9   C  0  1  Y  N  N  -5.878  -11.307  -34.216   6.071   2.099  -0.162  CAS  R7D  10  
R7D  CAY  C10  C  0  1  Y  N  N  -5.296   -5.316  -27.690  -2.910  -1.264   0.718  CAY  R7D  11  
R7D  CBA  C11  C  0  1  Y  N  N  -5.162   -3.941  -27.828  -3.691  -1.272  -0.423  CBA  R7D  12  
R7D  CBB  C12  C  0  1  Y  N  N  -4.994   -3.132  -26.706  -4.523  -0.203  -0.698  CBB  R7D  13  
R7D  CBC  C13  C  0  1  Y  N  N  -4.955   -3.683  -25.426  -4.575   0.873   0.168  CBC  R7D  14  
R7D  CBD  C14  C  0  1  Y  N  N  -5.090   -5.059  -25.294  -3.795   0.881   1.309  CBD  R7D  15  
R7D  CBE  C15  C  0  1  Y  N  N  -5.257   -5.866  -26.416  -2.966  -0.190   1.586  CBE  R7D  16  
R7D  CBF  C16  C  0  1  N  N  N  -4.785   -2.884  -24.285  -5.482   2.039  -0.133  CBF  R7D  17  
R7D  CX   C17  C  0  1  N  N  N  -3.145   -9.623  -30.925   2.348  -0.279   0.821  CX   R7D  18  
R7D  CXA  C18  C  0  1  N  N  R  -3.027   -8.963  -29.545   1.393  -1.035  -0.066  CXA  R7D  19  
R7D  FBG  F1   F  0  1  N  N  N  -3.516   -2.433  -24.198  -6.736   1.815   0.443  FBG  R7D  20  
R7D  FBH  F2   F  0  1  N  N  N  -5.050   -3.605  -23.176  -4.928   3.209   0.397  FBH  R7D  21  
R7D  FBI  F3   F  0  1  N  N  N  -5.596   -1.836  -24.333  -5.622   2.175  -1.518  FBI  R7D  22  
R7D  NAL  N1   N  0  1  N  N  N  -4.211   -9.299  -31.671   3.592   0.005   0.385  NAL  R7D  23  
R7D  NAO  N2   N  0  1  Y  N  N  -5.662  -11.523  -31.864   6.740  -0.027   0.574  NAO  R7D  24  
R7D  NX   N3   N  0  1  N  N  N  -4.207   -8.151  -29.232   0.118  -1.216   0.631  NX   R7D  25  
R7D  OAD  O1   O  0  1  N  N  N  -3.128   -6.165  -29.407  -0.363  -3.015  -0.575  OAD  R7D  26  
R7D  OAZ  O2   O  0  1  N  N  N  -5.931   -5.402  -29.928  -2.620  -3.640   0.576  OAZ  R7D  27  
R7D  OX   O3   O  0  1  N  N  N  -2.282  -10.405  -31.307   1.998   0.073   1.928  OX   R7D  28  
R7D  H1   H1   H  0  1  N  N  N  -2.542  -10.294  -26.025  -0.097  -0.355  -3.501  H1   R7D  29  
R7D  H2   H2   H  0  1  N  N  N  -3.806  -10.637  -28.428   2.110  -0.109  -1.875  H2   R7D  30  
R7D  H3   H3   H  0  1  N  N  N  -2.029  -10.673  -28.687   0.738   0.730  -1.113  H3   R7D  31  
R7D  H4   H4   H  0  1  N  N  N  -6.195   -6.937  -28.567  -1.825  -2.484   2.092  H4   R7D  32  
R7D  H5   H5   H  0  1  N  N  N  -3.387  -10.323  -33.311   4.685   0.177   2.167  H5   R7D  33  
R7D  H6   H6   H  0  1  N  N  N  -4.663   -9.125  -33.717   4.096   1.715   1.491  H6   R7D  34  
R7D  H7   H7   H  0  1  N  N  N  -6.895  -13.028  -30.941   8.622  -0.711   0.021  H7   R7D  35  
R7D  H8   H8   H  0  1  N  N  N  -7.940  -13.734  -33.069   9.163   1.326  -1.253  H8   R7D  36  
R7D  H9   H9   H  0  1  N  N  N  -7.270  -12.625  -35.183   7.496   3.167  -1.366  H9   R7D  37  
R7D  H10  H10  H  0  1  N  N  N  -5.583  -10.818  -35.133   5.324   2.879  -0.191  H10  R7D  38  
R7D  H11  H11  H  0  1  N  N  N  -5.188   -3.496  -28.811  -3.651  -2.113  -1.099  H11  R7D  39  
R7D  H12  H12  H  0  1  N  N  N  -4.893   -2.064  -26.830  -5.133  -0.209  -1.589  H12  R7D  40  
R7D  H13  H13  H  0  1  N  N  N  -5.065   -5.507  -24.312  -3.835   1.722   1.985  H13  R7D  41  
R7D  H14  H14  H  0  1  N  N  N  -5.358   -6.934  -26.294  -2.359  -0.186   2.480  H14  R7D  42  
R7D  H15  H15  H  0  1  N  N  N  -2.129   -8.328  -29.533   1.817  -2.009  -0.309  H15  R7D  43  
R7D  H16  H16  H  0  1  N  N  N  -4.896   -8.657  -31.327   3.872  -0.276  -0.500  H16  R7D  44  
R7D  H17  H17  H  0  1  N  N  N  -5.080   -8.607  -29.056  -0.144  -0.598   1.331  H17  R7D  45  
R7D  H18  H18  H  0  1  N  N  N  -5.196   -5.186  -30.490  -2.808  -3.661  -0.373  H18  R7D  46  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
R7D  CAR  CAS  DOUB  Y  N   1  
R7D  CAR  CAQ  SING  Y  N   2  
R7D  CAS  CAN  SING  Y  N   3  
R7D  CAQ  CAP  DOUB  Y  N   4  
R7D  CAN  CAM  SING  N  N   5  
R7D  CAN  NAO  DOUB  Y  N   6  
R7D  CAM  NAL  SING  N  N   7  
R7D  CAP  NAO  SING  Y  N   8  
R7D  NAL  CX   SING  N  N   9  
R7D  OX   CX   DOUB  N  N  10  
R7D  CX   CXA  SING  N  N  11  
R7D  OAZ  CAA  SING  N  N  12  
R7D  CXA  NX   SING  N  N  13  
R7D  CXA  CE   SING  N  N  14  
R7D  OAD  CAB  DOUB  N  N  15  
R7D  NX   CAB  SING  N  N  16  
R7D  CAB  CAA  SING  N  N  17  
R7D  CAA  CAY  SING  N  N  18  
R7D  CE   SD   SING  N  N  19  
R7D  CBA  CAY  DOUB  Y  N  20  
R7D  CBA  CBB  SING  Y  N  21  
R7D  CAY  CBE  SING  Y  N  22  
R7D  CBB  CBC  DOUB  Y  N  23  
R7D  CBE  CBD  DOUB  Y  N  24  
R7D  CBC  CBD  SING  Y  N  25  
R7D  CBC  CBF  SING  N  N  26  
R7D  FBI  CBF  SING  N  N  27  
R7D  CBF  FBG  SING  N  N  28  
R7D  CBF  FBH  SING  N  N  29  
R7D  SD   H1   SING  N  N  30  
R7D  CE   H2   SING  N  N  31  
R7D  CE   H3   SING  N  N  32  
R7D  CAA  H4   SING  N  N  33  
R7D  CAM  H5   SING  N  N  34  
R7D  CAM  H6   SING  N  N  35  
R7D  CAP  H7   SING  N  N  36  
R7D  CAQ  H8   SING  N  N  37  
R7D  CAR  H9   SING  N  N  38  
R7D  CAS  H10  SING  N  N  39  
R7D  CBA  H11  SING  N  N  40  
R7D  CBB  H12  SING  N  N  41  
R7D  CBD  H13  SING  N  N  42  
R7D  CBE  H14  SING  N  N  43  
R7D  CXA  H15  SING  N  N  44  
R7D  NAL  H16  SING  N  N  45  
R7D  NX   H17  SING  N  N  46  
R7D  OAZ  H18  SING  N  N  47  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
R7D  SMILES            ACDLabs               12.01  "SCC(C(NCc1ncccc1)=O)NC(C(c2ccc(cc2)C(F)(F)F)O)=O"  
R7D  InChI             InChI                 1.03   "InChI=1S/C18H18F3N3O3S/c19-18(20,21)12-6-4-11(5-7-12)15(25)17(27)24-14(10-28)16(26)23-9-13-3-1-2-8-22-13/h1-8,14-15,25,28H,9-10H2,(H,23,26)(H,24,27)/t14-,15+/m0/s1"  
R7D  InChIKey          InChI                 1.03   MMSMEDXVHMERGZ-LSDHHAIUSA-N  
R7D  SMILES_CANONICAL  CACTVS                3.385  "O[C@@H](C(=O)N[C@@H](CS)C(=O)NCc1ccccn1)c2ccc(cc2)C(F)(F)F"  
R7D  SMILES            CACTVS                3.385  "O[CH](C(=O)N[CH](CS)C(=O)NCc1ccccn1)c2ccc(cc2)C(F)(F)F"  
R7D  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1ccnc(c1)CNC(=O)[C@H](CS)NC(=O)[C@@H](c2ccc(cc2)C(F)(F)F)O"  
R7D  SMILES            "OpenEye OEToolkits"  2.0.7  "c1ccnc(c1)CNC(=O)C(CS)NC(=O)C(c2ccc(cc2)C(F)(F)F)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
R7D  "SYSTEMATIC NAME"  ACDLabs               12.01  "N~2~-{(2R)-2-hydroxy-2-[4-(trifluoromethyl)phenyl]acetyl}-N-[(pyridin-2-yl)methyl]-L-cysteinamide"  
R7D  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "(2~{R})-2-[[(2~{R})-2-oxidanyl-2-[4-(trifluoromethyl)phenyl]ethanoyl]amino]-~{N}-(pyridin-2-ylmethyl)-3-sulfanyl-propanamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
R7D  "Create component"  2020-02-04  RCSB  
R7D  "Modify formula"    2020-02-04  RCSB  
R7D  "Initial release"   2020-08-05  RCSB  
##
