data_S2K
#

_chem_comp.id                                   S2K
_chem_comp.name                                 "(2~{S},6~{S})-2-azanyl-6-[[(4~{R})-4-azanyl-5-oxidanyl-5-oxidanylidene-pentanoyl]amino]heptanedioic acid"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C12 H21 N3 O7"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-11-06
_chem_comp.pdbx_modified_date                   2021-10-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       319.311
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    S2K
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7AJO
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBE
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
S2K  C10  C1   C  0  1  N  N  N  -11.710  11.544   0.018   3.949   0.095   0.183  C10  S2K   1  
S2K  C01  C2   C  0  1  N  N  N  -14.443  11.748   1.524   0.344  -3.336   0.124  C01  S2K   2  
S2K  N01  N1   N  0  1  N  N  N   -9.429  11.034   0.776   4.345   1.559  -1.739  N01  S2K   3  
S2K  O01  O1   O  0  1  N  N  N  -13.660  13.234   4.398  -1.757  -1.191  -1.105  O01  S2K   4  
S2K  C02  C3   C  0  1  N  N  S  -13.930  13.197   1.540   0.684  -1.907  -0.214  C02  S2K   5  
S2K  N02  N2   N  0  1  N  N  N  -14.709  13.983   2.484  -0.230  -1.007   0.494  N02  S2K   6  
S2K  N14  N3   N  0  1  N  N  N  -14.760  17.490   7.126  -4.019   2.664   0.684  N14  S2K   7  
S2K  O02  O2   O  0  1  N  N  N  -14.012  10.917   2.256  -0.568  -3.577   0.879  O02  S2K   8  
S2K  C03  C4   C  0  1  N  N  N  -14.498  15.794   5.424  -3.656   0.381  -0.126  C03  S2K   9  
S2K  C04  C5   C  0  1  N  N  N  -12.423  13.383   1.712   2.123  -1.611   0.212  C04  S2K  10  
S2K  O04  O3   O  0  1  N  N  N  -11.805   8.559   0.104   6.671   1.749  -0.470  O04  S2K  11  
S2K  C05  C6   C  0  1  N  N  N  -15.405  14.718   4.831  -2.372   0.214   0.689  C05  S2K  12  
S2K  O05  O4   O  0  1  N  N  N  -10.628   8.749   2.097   5.858   2.247   1.524  O05  S2K  13  
S2K  C06  C7   C  0  1  N  N  N  -14.535  13.888   3.925  -1.432  -0.711  -0.039  C06  S2K  14  
S2K  C07  C8   C  0  1  N  N  R  -15.365  16.937   5.927  -4.611   1.321   0.613  C07  S2K  15  
S2K  C08  C9   C  0  1  N  N  N  -15.531  18.016   4.833  -5.922   1.389  -0.127  C08  S2K  16  
S2K  C09  C10  C  0  1  N  N  N  -11.812  13.035   0.348   2.510  -0.202  -0.243  C09  S2K  17  
S2K  O09  O5   O  0  1  N  N  N  -15.303  17.757   3.610  -6.159   2.326  -0.852  O09  S2K  18  
S2K  C11  C11  C  0  1  N  N  S  -10.843  10.782   1.038   4.336   1.503  -0.271  C11  S2K  19  
S2K  C12  C12  C  0  1  N  N  N  -11.119   9.274   1.037   5.707   1.842   0.254  C12  S2K  20  
S2K  O03  O6   O  0  1  N  N  N  -15.947  19.173   5.167  -6.827   0.409   0.020  O03  S2K  21  
S2K  O1   O7   O  0  1  N  Y  N  -15.653  11.280   0.292   1.055  -4.340  -0.413  O1   S2K  22  
S2K  H1   H1   H  0  1  N  N  N  -12.721  11.111   0.018   4.028   0.029   1.268  H1   S2K  23  
S2K  H2   H2   H  0  1  N  N  N  -11.263  11.432  -0.981   4.620  -0.632  -0.275  H2   S2K  24  
S2K  H3   H3   H  0  1  N  N  N   -8.872  10.537   1.441   4.535   2.495  -2.064  H3   S2K  25  
S2K  H4   H4   H  0  1  N  N  N   -9.201  10.724  -0.147   5.009   0.902  -2.121  H4   S2K  26  
S2K  H6   H6   H  0  1  N  N  N  -14.162  13.598   0.542   0.584  -1.754  -1.289  H6   S2K  27  
S2K  H7   H7   H  0  1  N  N  N  -15.395  14.617   2.126   0.030  -0.624   1.346  H7   S2K  28  
S2K  H8   H8   H  0  1  N  N  N  -14.665  16.771   7.814  -3.850   3.034  -0.239  H8   S2K  29  
S2K  H9   H9   H  0  1  N  N  N  -13.858  17.859   6.904  -4.600   3.287   1.224  H9   S2K  30  
S2K  H11  H11  H  0  1  N  N  N  -13.920  15.372   6.259  -3.415   0.802  -1.102  H11  S2K  31  
S2K  H12  H12  H  0  1  N  N  N  -13.808  16.164   4.651  -4.132  -0.590  -0.257  H12  S2K  32  
S2K  H13  H13  H  0  1  N  N  N  -12.038  12.707   2.490   2.202  -1.677   1.297  H13  S2K  33  
S2K  H14  H14  H  0  1  N  N  N  -12.192  14.424   1.983   2.795  -2.337  -0.246  H14  S2K  34  
S2K  H15  H15  H  0  1  N  N  N  -16.221  15.181   4.257  -1.896   1.186   0.820  H15  S2K  35  
S2K  H16  H16  H  0  1  N  N  N  -15.828  14.093   5.631  -2.613  -0.207   1.665  H16  S2K  36  
S2K  H17  H17  H  0  1  N  N  N  -10.822   7.819   2.109   6.757   2.453   1.816  H17  S2K  37  
S2K  H18  H18  H  0  1  N  N  N  -16.361  16.539   6.171  -4.782   0.946   1.622  H18  S2K  38  
S2K  H19  H19  H  0  1  N  N  N  -10.796  13.457   0.317   1.838   0.525   0.215  H19  S2K  39  
S2K  H20  H20  H  0  1  N  N  N  -12.430  13.510  -0.428   2.431  -0.136  -1.328  H20  S2K  40  
S2K  H21  H21  H  0  1  N  N  N  -11.089  11.167   2.039   3.612   2.221   0.115  H21  S2K  41  
S2K  H22  H22  H  0  1  N  N  N  -16.033  19.715   4.392  -7.653   0.497  -0.475  H22  S2K  42  
S2K  H23  H23  H  0  1  N  N  N  -15.833  10.350   0.362   0.799  -5.239  -0.167  H23  S2K  43  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
S2K  C10  C09  SING  N  N   1  
S2K  C10  C11  SING  N  N   2  
S2K  O04  C12  DOUB  N  N   3  
S2K  C09  C04  SING  N  N   4  
S2K  N01  C11  SING  N  N   5  
S2K  C12  C11  SING  N  N   6  
S2K  C12  O05  SING  N  N   7  
S2K  C01  C02  SING  N  N   8  
S2K  C01  O02  DOUB  N  N   9  
S2K  C02  C04  SING  N  N  10  
S2K  C02  N02  SING  N  N  11  
S2K  N02  C06  SING  N  N  12  
S2K  O09  C08  DOUB  N  N  13  
S2K  C06  O01  DOUB  N  N  14  
S2K  C06  C05  SING  N  N  15  
S2K  C05  C03  SING  N  N  16  
S2K  C08  O03  SING  N  N  17  
S2K  C08  C07  SING  N  N  18  
S2K  C03  C07  SING  N  N  19  
S2K  C07  N14  SING  N  N  20  
S2K  C01  O1   SING  N  N  21  
S2K  C10  H1   SING  N  N  22  
S2K  C10  H2   SING  N  N  23  
S2K  N01  H3   SING  N  N  24  
S2K  N01  H4   SING  N  N  25  
S2K  C02  H6   SING  N  N  26  
S2K  N02  H7   SING  N  N  27  
S2K  N14  H8   SING  N  N  28  
S2K  N14  H9   SING  N  N  29  
S2K  C03  H11  SING  N  N  30  
S2K  C03  H12  SING  N  N  31  
S2K  C04  H13  SING  N  N  32  
S2K  C04  H14  SING  N  N  33  
S2K  C05  H15  SING  N  N  34  
S2K  C05  H16  SING  N  N  35  
S2K  O05  H17  SING  N  N  36  
S2K  C07  H18  SING  N  N  37  
S2K  C09  H19  SING  N  N  38  
S2K  C09  H20  SING  N  N  39  
S2K  C11  H21  SING  N  N  40  
S2K  O03  H22  SING  N  N  41  
S2K  O1   H23  SING  N  N  42  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
S2K  InChI             InChI                 1.03   "InChI=1S/C12H21N3O7/c13-6(10(17)18)2-1-3-8(12(21)22)15-9(16)5-4-7(14)11(19)20/h6-8H,1-5,13-14H2,(H,15,16)(H,17,18)(H,19,20)(H,21,22)/t6-,7+,8-/m0/s1"  
S2K  InChIKey          InChI                 1.03   QIFGMZZTJRULMA-RNJXMRFFSA-N  
S2K  SMILES_CANONICAL  CACTVS                3.385  "N[C@@H](CCC[C@H](NC(=O)CC[C@@H](N)C(O)=O)C(O)=O)C(O)=O"  
S2K  SMILES            CACTVS                3.385  "N[CH](CCC[CH](NC(=O)CC[CH](N)C(O)=O)C(O)=O)C(O)=O"  
S2K  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "C(C[C@@H](C(=O)O)N)C[C@@H](C(=O)O)NC(=O)CC[C@H](C(=O)O)N"  
S2K  SMILES            "OpenEye OEToolkits"  2.0.7  "C(CC(C(=O)O)N)CC(C(=O)O)NC(=O)CCC(C(=O)O)N"  
#
_pdbx_chem_comp_identifier.comp_id          S2K
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "(2~{S},6~{S})-2-azanyl-6-[[(4~{R})-4-azanyl-5-oxidanyl-5-oxidanylidene-pentanoyl]amino]heptanedioic acid"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
S2K  "Create component"  2020-11-06  PDBE  
S2K  "Initial release"   2021-10-06  RCSB  
##
