data_S9W
#

_chem_comp.id                                   S9W
_chem_comp.name                                 "~{N}-[3-[[4-[(4-bromophenyl)methyl]piperazin-1-yl]methyl]phenyl]-4-methanoyl-oxane-4-carboxamide"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C25 H30 Br N3 O3"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-11-13
_chem_comp.pdbx_modified_date                   2021-06-25
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       500.428
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    S9W
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7AYR
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBE
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
S9W  C10  C1   C   0  1  N  N  N  82.145  80.515  -1.333   5.388   0.542  -0.446  C10  S9W   1  
S9W  C15  C2   C   0  1  Y  N  N  82.845  77.469  -5.371   2.566  -3.526   0.077  C15  S9W   2  
S9W  C14  C3   C   0  1  Y  N  N  82.114  77.204  -4.224   2.371  -2.386  -0.682  C14  S9W   3  
S9W  C13  C4   C   0  1  Y  N  N  82.002  78.180  -3.232   3.395  -1.473  -0.834  C13  S9W   4  
S9W  C12  C5   C   0  1  Y  N  N  82.654  79.418  -3.414   4.622  -1.699  -0.223  C12  S9W   5  
S9W  C8   C6   C   0  1  N  N  N  82.240  81.555   0.917   7.359   1.289  -1.718  C8   S9W   6  
S9W  C2   C7   C   0  1  N  N  N  82.009  81.824  -0.580   6.512   1.545  -0.498  C2   S9W   7  
S9W  C3   C8   C   0  1  N  N  N  82.908  82.948  -1.133   5.933   2.961  -0.564  C3   S9W   8  
S9W  C4   C9   C   0  1  N  N  N  82.565  84.260  -0.453   5.137   3.239   0.714  C4   S9W   9  
S9W  C6   C10  C   0  1  N  N  N  80.254  83.617  -0.201   6.524   1.749   1.990  C6   S9W  10  
S9W  C7   C11  C   0  1  N  N  N  80.589  82.282  -0.841   7.374   1.413   0.761  C7   S9W  11  
S9W  O5   O1   O   0  1  N  N  N  81.187  84.610  -0.577   5.988   3.071   1.850  O5   S9W  12  
S9W  O9   O2   O   0  1  N  N  N  81.340  81.402   1.752   7.079   0.386  -2.469  O9   S9W  13  
S9W  N11  N1   N   0  1  N  N  N  82.688  80.465  -2.533   5.662  -0.775  -0.375  N11  S9W  14  
S9W  C16  C12  C   0  1  Y  N  N  83.488  78.693  -5.565   3.784  -3.752   0.690  C16  S9W  15  
S9W  C17  C13  C   0  1  Y  N  N  83.393  79.656  -4.590   4.815  -2.845   0.538  C17  S9W  16  
S9W  C18  C14  C   0  1  N  N  N  81.426  75.862  -4.125   1.040  -2.141  -1.344  C18  S9W  17  
S9W  N19  N2   N   0  1  N  N  N  82.069  74.923  -3.201   0.171  -1.386  -0.432  N19  S9W  18  
S9W  C20  C15  C   0  1  N  N  N  83.355  74.493  -3.764  -0.173  -2.187   0.752  C20  S9W  19  
S9W  C21  C16  C   0  1  N  N  N  83.857  73.174  -3.148  -1.011  -1.339   1.712  C21  S9W  20  
S9W  N22  N3   N   0  1  N  N  N  82.850  72.084  -3.078  -2.224  -0.877   1.022  N22  S9W  21  
S9W  C23  C17  C   0  1  N  N  N  81.761  72.639  -2.262  -1.880  -0.076  -0.162  C23  S9W  22  
S9W  C24  C18  C   0  1  N  N  N  81.139  73.784  -3.051  -1.042  -0.924  -1.122  C24  S9W  23  
S9W  C25  C19  C   0  1  N  N  N  83.379  70.859  -2.408  -3.093  -0.121   1.934  C25  S9W  24  
S9W  C26  C20  C   0  1  Y  N  N  84.548  70.242  -3.144  -4.424   0.123   1.272  C26  S9W  25  
S9W  C27  C21  C   0  1  Y  N  N  84.488  70.342  -4.516  -4.617   1.260   0.509  C27  S9W  26  
S9W  C28  C22  C   0  1  Y  N  N  85.529  69.837  -5.272  -5.837   1.482  -0.103  C28  S9W  27  
S9W  C29  C23  C   0  1  Y  N  N  86.631  69.211  -4.691  -6.863   0.567   0.048  C29  S9W  28  
S9W  C30  C24  C   0  1  Y  N  N  86.710  69.081  -3.288  -6.669  -0.570   0.811  C30  S9W  29  
S9W  C31  C25  C   0  1  Y  N  N  85.652  69.619  -2.519  -5.450  -0.791   1.423  C31  S9W  30  
S9W  BR1  BR1  BR  0  0  N  N  N  87.900  68.610  -5.976  -8.532   0.872  -0.789  BR1  S9W  31  
S9W  O33  O3   O   0  1  N  N  N  81.685  79.550  -0.843   4.236   0.922  -0.463  O33  S9W  32  
S9W  H1   H1   H   0  1  N  N  N  82.919  76.709  -6.135   1.763  -4.239   0.194  H1   S9W  33  
S9W  H2   H2   H   0  1  N  N  N  81.425  77.990  -2.339   3.243  -0.583  -1.426  H2   S9W  34  
S9W  H3   H3   H   0  1  N  N  N  83.261  81.495   1.264   8.216   1.914  -1.920  H3   S9W  35  
S9W  H4   H4   H   0  1  N  N  N  83.962  82.701  -0.940   6.745   3.683  -0.651  H4   S9W  36  
S9W  H5   H5   H   0  1  N  N  N  82.747  83.045  -2.217   5.274   3.046  -1.428  H5   S9W  37  
S9W  H6   H6   H   0  1  N  N  N  82.810  84.175   0.616   4.759   4.261   0.692  H6   S9W  38  
S9W  H7   H7   H   0  1  N  N  N  83.171  85.058  -0.906   4.301   2.543   0.780  H7   S9W  39  
S9W  H8   H8   H   0  1  N  N  N  79.249  83.928  -0.523   5.706   1.033   2.072  H8   S9W  40  
S9W  H9   H9   H   0  1  N  N  N  80.270  83.505   0.893   7.143   1.699   2.885  H9   S9W  41  
S9W  H10  H10  H   0  1  N  N  N  80.447  82.372  -1.928   7.745   0.392   0.844  H10  S9W  42  
S9W  H11  H11  H   0  1  N  N  N  79.900  81.523  -0.443   8.215   2.104   0.701  H11  S9W  43  
S9W  H12  H12  H   0  1  N  N  N  83.179  81.283  -2.833   6.581  -1.083  -0.428  H12  S9W  44  
S9W  H13  H13  H   0  1  N  N  N  84.051  78.880  -6.467   3.934  -4.643   1.282  H13  S9W  45  
S9W  H14  H14  H   0  1  N  N  N  83.890  80.605  -4.726   5.766  -3.022   1.017  H14  S9W  46  
S9W  H15  H15  H   0  1  N  N  N  80.393  76.028  -3.785   1.189  -1.570  -2.260  H15  S9W  47  
S9W  H16  H16  H   0  1  N  N  N  81.413  75.406  -5.126   0.572  -3.096  -1.584  H16  S9W  48  
S9W  H18  H18  H   0  1  N  N  N  83.236  74.353  -4.849  -0.746  -3.062   0.445  H18  S9W  49  
S9W  H19  H19  H   0  1  N  N  N  84.103  75.277  -3.575   0.741  -2.507   1.252  H19  S9W  50  
S9W  H20  H20  H   0  1  N  N  N  84.704  72.817  -3.753  -1.292  -1.940   2.577  H20  S9W  51  
S9W  H21  H21  H   0  1  N  N  N  84.201  73.386  -2.125  -0.429  -0.478   2.040  H21  S9W  52  
S9W  H23  H23  H   0  1  N  N  N  81.006  71.864  -2.066  -2.794   0.244  -0.662  H23  S9W  53  
S9W  H24  H24  H   0  1  N  N  N  82.159  73.013  -1.307  -1.308   0.799   0.145  H24  S9W  54  
S9W  H25  H25  H   0  1  N  N  N  80.237  74.129  -2.525  -0.761  -0.323  -1.987  H25  S9W  55  
S9W  H26  H26  H   0  1  N  N  N  80.862  73.417  -4.051  -1.624  -1.785  -1.450  H26  S9W  56  
S9W  H27  H27  H   0  1  N  N  N  82.571  70.115  -2.348  -3.242  -0.693   2.850  H27  S9W  57  
S9W  H28  H28  H   0  1  N  N  N  83.706  71.128  -1.393  -2.625   0.834   2.174  H28  S9W  58  
S9W  H29  H29  H   0  1  N  N  N  83.640  70.808  -4.995  -3.816   1.974   0.391  H29  S9W  59  
S9W  H30  H30  H   0  1  N  N  N  85.487  69.930  -6.347  -5.988   2.370  -0.699  H30  S9W  60  
S9W  H31  H31  H   0  1  N  N  N  87.548  68.588  -2.818  -7.470  -1.284   0.929  H31  S9W  61  
S9W  H32  H32  H   0  1  N  N  N  85.688  69.553  -1.442  -5.297  -1.681   2.015  H32  S9W  62  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
S9W  BR1  C29  SING  N  N   1  
S9W  C16  C15  DOUB  Y  N   2  
S9W  C16  C17  SING  Y  N   3  
S9W  C15  C14  SING  Y  N   4  
S9W  C28  C29  DOUB  Y  N   5  
S9W  C28  C27  SING  Y  N   6  
S9W  C29  C30  SING  Y  N   7  
S9W  C17  C12  DOUB  Y  N   8  
S9W  C27  C26  DOUB  Y  N   9  
S9W  C14  C18  SING  N  N  10  
S9W  C14  C13  DOUB  Y  N  11  
S9W  C18  N19  SING  N  N  12  
S9W  C20  N19  SING  N  N  13  
S9W  C20  C21  SING  N  N  14  
S9W  C12  C13  SING  Y  N  15  
S9W  C12  N11  SING  N  N  16  
S9W  C30  C31  DOUB  Y  N  17  
S9W  N19  C24  SING  N  N  18  
S9W  C21  N22  SING  N  N  19  
S9W  C26  C31  SING  Y  N  20  
S9W  C26  C25  SING  N  N  21  
S9W  N22  C25  SING  N  N  22  
S9W  N22  C23  SING  N  N  23  
S9W  C24  C23  SING  N  N  24  
S9W  N11  C10  SING  N  N  25  
S9W  C10  O33  DOUB  N  N  26  
S9W  C10  C2   SING  N  N  27  
S9W  C3   C2   SING  N  N  28  
S9W  C3   C4   SING  N  N  29  
S9W  C7   C2   SING  N  N  30  
S9W  C7   C6   SING  N  N  31  
S9W  C2   C8   SING  N  N  32  
S9W  O5   C4   SING  N  N  33  
S9W  O5   C6   SING  N  N  34  
S9W  C8   O9   DOUB  N  N  35  
S9W  C15  H1   SING  N  N  36  
S9W  C13  H2   SING  N  N  37  
S9W  C8   H3   SING  N  N  38  
S9W  C3   H4   SING  N  N  39  
S9W  C3   H5   SING  N  N  40  
S9W  C4   H6   SING  N  N  41  
S9W  C4   H7   SING  N  N  42  
S9W  C6   H8   SING  N  N  43  
S9W  C6   H9   SING  N  N  44  
S9W  C7   H10  SING  N  N  45  
S9W  C7   H11  SING  N  N  46  
S9W  N11  H12  SING  N  N  47  
S9W  C16  H13  SING  N  N  48  
S9W  C17  H14  SING  N  N  49  
S9W  C18  H15  SING  N  N  50  
S9W  C18  H16  SING  N  N  51  
S9W  C20  H18  SING  N  N  52  
S9W  C20  H19  SING  N  N  53  
S9W  C21  H20  SING  N  N  54  
S9W  C21  H21  SING  N  N  55  
S9W  C23  H23  SING  N  N  56  
S9W  C23  H24  SING  N  N  57  
S9W  C24  H25  SING  N  N  58  
S9W  C24  H26  SING  N  N  59  
S9W  C25  H27  SING  N  N  60  
S9W  C25  H28  SING  N  N  61  
S9W  C27  H29  SING  N  N  62  
S9W  C28  H30  SING  N  N  63  
S9W  C30  H31  SING  N  N  64  
S9W  C31  H32  SING  N  N  65  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
S9W  InChI             InChI                 1.03   "InChI=1S/C25H30BrN3O3/c26-22-6-4-20(5-7-22)17-28-10-12-29(13-11-28)18-21-2-1-3-23(16-21)27-24(31)25(19-30)8-14-32-15-9-25/h1-7,16,19H,8-15,17-18H2,(H,27,31)"  
S9W  InChIKey          InChI                 1.03   PPXXFRMHSKGYSK-UHFFFAOYSA-N  
S9W  SMILES_CANONICAL  CACTVS                3.385  "Brc1ccc(CN2CCN(CC2)Cc3cccc(NC(=O)C4(CCOCC4)C=O)c3)cc1"  
S9W  SMILES            CACTVS                3.385  "Brc1ccc(CN2CCN(CC2)Cc3cccc(NC(=O)C4(CCOCC4)C=O)c3)cc1"  
S9W  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1cc(cc(c1)NC(=O)C2(CCOCC2)C=O)CN3CCN(CC3)Cc4ccc(cc4)Br"  
S9W  SMILES            "OpenEye OEToolkits"  2.0.7  "c1cc(cc(c1)NC(=O)C2(CCOCC2)C=O)CN3CCN(CC3)Cc4ccc(cc4)Br"  
#
_pdbx_chem_comp_identifier.comp_id          S9W
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "~{N}-[3-[[4-[(4-bromophenyl)methyl]piperazin-1-yl]methyl]phenyl]-4-methanoyl-oxane-4-carboxamide"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
S9W  "Create component"  2020-11-13  PDBE  
S9W  "Initial release"   2021-06-30  RCSB  
##
