data_V6A
#

_chem_comp.id                                   V6A
_chem_comp.name                                 "selinexor, bound form"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C17 H13 F6 N7 O"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "3-{3-[3,5-bis(trifluoromethyl)phenyl]-1H-1,2,4-triazol-1-yl}-N'-(pyrazin-2-yl)propanehydrazide"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-07-06
_chem_comp.pdbx_modified_date                   2021-03-13
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       445.322
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    V6A
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6XJS
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
V6A  C10  C1   C  0  1  Y  N  N  22.260  20.679  28.964  -0.190   3.252  -0.224  C10  V6A   1  
V6A  C11  C2   C  0  1  N  N  N  21.514  22.837  29.711   1.982   2.287  -1.039  C11  V6A   2  
V6A  C12  C3   C  0  1  N  N  N  22.062  23.830  28.696   2.768   1.251  -0.232  C12  V6A   3  
V6A  C13  C4   C  0  1  N  N  N  21.701  23.480  27.254   4.222   1.310  -0.622  C13  V6A   4  
V6A  C14  C5   C  0  1  Y  N  N  24.629  25.023  26.475   7.379  -0.317   0.205  C14  V6A   5  
V6A  C15  C6   C  0  1  Y  N  N  26.006  25.221  26.402   8.724  -0.265  -0.154  C15  V6A   6  
V6A  C16  C7   C  0  1  Y  N  N  25.738  27.471  26.268   9.183  -1.940   1.337  C16  V6A   7  
V6A  C17  C8   C  0  1  Y  N  N  24.365  27.276  26.336   7.848  -1.998   1.692  C17  V6A   8  
V6A  C01  C9   C  0  1  Y  N  N  19.174  16.604  26.919  -3.693  -1.525  -0.335  C01  V6A   9  
V6A  C02  C10  C  0  1  Y  N  N  17.829  16.763  26.931  -4.886  -0.984   0.111  C02  V6A  10  
V6A  C03  C11  C  0  1  Y  N  N  17.318  17.919  27.415  -4.964   0.359   0.432  C03  V6A  11  
V6A  C04  C12  C  0  1  Y  N  N  18.126  18.914  27.906  -3.852   1.167   0.309  C04  V6A  12  
V6A  C05  C13  C  0  1  Y  N  N  19.475  18.743  27.878  -2.649   0.628  -0.140  C05  V6A  13  
V6A  C06  C14  C  0  1  Y  N  N  19.989  17.583  27.383  -2.575  -0.726  -0.462  C06  V6A  14  
V6A  C07  C15  C  0  1  N  N  N  19.737  15.332  26.379  -3.614  -2.990  -0.677  C07  V6A  15  
V6A  C08  C16  C  0  1  N  N  N  15.849  18.087  27.446  -6.267   0.941   0.918  C08  V6A  16  
V6A  C09  C17  C  0  1  Y  N  N  20.432  19.772  28.383  -1.450   1.492  -0.274  C09  V6A  17  
V6A  F01  F1   F  0  1  N  N  N  19.609  15.226  25.100  -3.250  -3.136  -2.020  F01  V6A  18  
V6A  F02  F2   F  0  1  N  N  N  19.150  14.310  26.880  -2.656  -3.607   0.135  F02  V6A  19  
V6A  F03  F3   F  0  1  N  N  N  20.971  15.197  26.696  -4.861  -3.587  -0.465  F03  V6A  20  
V6A  F04  F4   F  0  1  N  N  N  15.153  17.335  26.658  -6.091   1.473   2.200  F04  V6A  21  
V6A  F05  F5   F  0  1  N  N  N  15.561  19.301  27.100  -6.679   1.954   0.045  F05  V6A  22  
V6A  F06  F6   F  0  1  N  N  N  15.427  17.759  28.632  -7.240  -0.063   0.959  F06  V6A  23  
V6A  N01  N1   N  0  1  Y  N  N  21.714  19.588  28.478  -1.395   2.801   0.004  N01  V6A  24  
V6A  N02  N2   N  0  1  Y  N  N  21.323  21.509  29.157   0.568   2.230  -0.660  N02  V6A  25  
V6A  N03  N3   N  0  1  Y  N  N  20.194  20.950  28.795  -0.263   1.097  -0.681  N03  V6A  26  
V6A  N04  N4   N  0  1  N  N  N  22.735  23.409  26.238   5.111   0.482  -0.036  N04  V6A  27  
V6A  N05  N5   N  0  1  N  N  N  24.082  23.668  26.592   6.463   0.536  -0.399  N05  V6A  28  
V6A  N06  N6   N  0  1  Y  N  N  26.528  26.426  26.304   9.590  -1.077   0.422  N06  V6A  29  
V6A  N07  N7   N  0  1  Y  N  N  23.827  26.073  26.439   6.974  -1.188   1.121  N07  V6A  30  
V6A  O01  O1   O  0  1  N  N  N  20.580  23.274  26.966   4.594   2.101  -1.462  O01  V6A  31  
V6A  H1   H1   H  0  1  N  N  N  23.310  20.838  29.162   0.139   4.272  -0.090  H1   V6A  32  
V6A  H2   H2   H  0  1  N  Y  N  22.221  22.768  30.551   2.374   3.282  -0.832  H2   V6A  33  
V6A  H3   H3   H  0  1  N  N  N  20.545  23.207  30.076   2.082   2.070  -2.103  H3   V6A  34  
V6A  H4   H4   H  0  1  N  N  N  23.158  23.853  28.786   2.668   1.467   0.832  H4   V6A  35  
V6A  H5   H5   H  0  1  N  N  N  21.655  24.826  28.926   2.376   0.255  -0.439  H5   V6A  36  
V6A  H6   H6   H  0  1  N  N  N  26.663  24.364  26.426   9.057   0.439  -0.902  H6   V6A  37  
V6A  H7   H7   H  0  1  N  N  N  26.148  28.467  26.187   9.894  -2.603   1.807  H7   V6A  38  
V6A  H8   H8   H  0  1  N  N  N  23.714  28.137  26.304   7.520  -2.704   2.441  H8   V6A  39  
V6A  H9   H9   H  0  1  N  N  N  17.178  15.984  26.562  -5.758  -1.613   0.209  H9   V6A  40  
V6A  H10  H10  H  0  1  N  N  N  17.697  19.820  28.309  -3.915   2.216   0.560  H10  V6A  41  
V6A  H11  H11  H  0  1  N  N  N  21.059  17.441  27.360  -1.645  -1.149  -0.811  H11  V6A  42  
V6A  H12  H12  H  0  1  N  N  N  22.498  23.179  25.294   4.814  -0.151   0.636  H12  V6A  43  
V6A  H13  H13  H  0  1  N  N  N  24.185  23.398  27.549   6.760   1.170  -1.071  H13  V6A  44  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
V6A  F01  C07  SING  N  N   1  
V6A  N04  N05  SING  N  N   2  
V6A  N04  C13  SING  N  N   3  
V6A  C16  N06  DOUB  Y  N   4  
V6A  C16  C17  SING  Y  N   5  
V6A  N06  C15  SING  Y  N   6  
V6A  C17  N07  DOUB  Y  N   7  
V6A  C07  F03  SING  N  N   8  
V6A  C07  F02  SING  N  N   9  
V6A  C07  C01  SING  N  N  10  
V6A  C15  C14  DOUB  Y  N  11  
V6A  N07  C14  SING  Y  N  12  
V6A  C14  N05  SING  N  N  13  
V6A  F04  C08  SING  N  N  14  
V6A  C01  C02  DOUB  Y  N  15  
V6A  C01  C06  SING  Y  N  16  
V6A  C02  C03  SING  Y  N  17  
V6A  O01  C13  DOUB  N  N  18  
V6A  F05  C08  SING  N  N  19  
V6A  C13  C12  SING  N  N  20  
V6A  C06  C05  DOUB  Y  N  21  
V6A  C03  C08  SING  N  N  22  
V6A  C03  C04  DOUB  Y  N  23  
V6A  C08  F06  SING  N  N  24  
V6A  C05  C04  SING  Y  N  25  
V6A  C05  C09  SING  N  N  26  
V6A  C09  N01  SING  Y  N  27  
V6A  C09  N03  DOUB  Y  N  28  
V6A  N01  C10  DOUB  Y  N  29  
V6A  C12  C11  SING  N  N  30  
V6A  N03  N02  SING  Y  N  31  
V6A  C10  N02  SING  Y  N  32  
V6A  N02  C11  SING  N  N  33  
V6A  C10  H1   SING  N  N  34  
V6A  C11  H2   SING  N  N  35  
V6A  C11  H3   SING  N  N  36  
V6A  C12  H4   SING  N  N  37  
V6A  C12  H5   SING  N  N  38  
V6A  C15  H6   SING  N  N  39  
V6A  C16  H7   SING  N  N  40  
V6A  C17  H8   SING  N  N  41  
V6A  C02  H9   SING  N  N  42  
V6A  C04  H10  SING  N  N  43  
V6A  C06  H11  SING  N  N  44  
V6A  N04  H12  SING  N  N  45  
V6A  N05  H13  SING  N  N  46  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
V6A  SMILES            ACDLabs               12.01  "c3n(CCC(NNc1cnccn1)=O)nc(c2cc(cc(c2)C(F)(F)F)C(F)(F)F)n3"  
V6A  InChI             InChI                 1.03   "InChI=1S/C17H13F6N7O/c18-16(19,20)11-5-10(6-12(7-11)17(21,22)23)15-26-9-30(29-15)4-1-14(31)28-27-13-8-24-2-3-25-13/h2-3,5-9H,1,4H2,(H,25,27)(H,28,31)"  
V6A  InChIKey          InChI                 1.03   SRMSVLNNUIPUGA-UHFFFAOYSA-N  
V6A  SMILES_CANONICAL  CACTVS                3.385  "FC(F)(F)c1cc(cc(c1)C(F)(F)F)c2ncn(CCC(=O)NNc3cnccn3)n2"  
V6A  SMILES            CACTVS                3.385  "FC(F)(F)c1cc(cc(c1)C(F)(F)F)c2ncn(CCC(=O)NNc3cnccn3)n2"  
V6A  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1cnc(cn1)NNC(=O)CCn2cnc(n2)c3cc(cc(c3)C(F)(F)F)C(F)(F)F"  
V6A  SMILES            "OpenEye OEToolkits"  2.0.7  "c1cnc(cn1)NNC(=O)CCn2cnc(n2)c3cc(cc(c3)C(F)(F)F)C(F)(F)F"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
V6A  "SYSTEMATIC NAME"  ACDLabs               12.01  "3-{3-[3,5-bis(trifluoromethyl)phenyl]-1H-1,2,4-triazol-1-yl}-N'-(pyrazin-2-yl)propanehydrazide"  
V6A  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "3-[3-[3,5-bis(trifluoromethyl)phenyl]-1,2,4-triazol-1-yl]-~{N}'-pyrazin-2-yl-propanehydrazide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
V6A  "Create component"  2020-07-06  RCSB  
V6A  "Initial release"   2021-01-27  RCSB  
V6A  "Modify synonyms"   2021-03-13  RCSB  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     V6A
_pdbx_chem_comp_synonyms.name        "3-{3-[3,5-bis(trifluoromethyl)phenyl]-1H-1,2,4-triazol-1-yl}-N'-(pyrazin-2-yl)propanehydrazide"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
##
