data_Y2D
#

_chem_comp.id                                   Y2D
_chem_comp.name                                 "1-[(3R,4R)-3-[4-(pyridin-3-yl)-1H-1,2,3-triazol-1-yl]-4-{[4-(trifluoromethyl)phenyl]methoxy}pyrrolidin-1-yl]prop-2-en-1-one"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C22 H20 F3 N5 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "1-[(3~{R},4~{R})-3-(4-pyridin-3-yl-1,2,3-triazol-1-yl)-4-[[4-(trifluoromethyl)phenyl]methoxy]pyrrolidin-1-yl]prop-2-en-1-one"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-01-28
_chem_comp.pdbx_modified_date                   2022-01-28
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       443.422
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    Y2D
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7LI5
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
Y2D  C4   C1   C  0  1  Y  N  N   5.532   2.710  -30.813  -3.107   1.183  -0.530  C4   Y2D   1  
Y2D  C14  C2   C  0  1  Y  N  N   8.319  -4.317  -33.927   4.458   4.111   0.163  C14  Y2D   2  
Y2D  C5   C3   C  0  1  Y  N  N   4.832   2.611  -32.003  -2.859  -0.154  -0.776  C5   Y2D   3  
Y2D  C6   C4   C  0  1  N  N  N   4.632   1.269  -32.653  -1.458  -0.617  -1.082  C6   Y2D   4  
Y2D  C11  C5   C  0  1  Y  N  N   4.882  -3.066  -32.892   3.152   0.563   0.396  C11  Y2D   5  
Y2D  C7   C6   C  0  1  N  N  R   3.016  -0.506  -32.696   0.549  -1.418  -0.045  C7   Y2D   6  
Y2D  C8   C7   C  0  1  N  N  N   1.501  -0.623  -32.801   0.616  -2.966  -0.047  C8   Y2D   7  
Y2D  C9   C8   C  0  1  N  N  N   2.341  -2.470  -31.446   2.521  -2.154   1.151  C9   Y2D   8  
Y2D  C10  C9   C  0  1  N  N  R   3.466  -1.461  -31.598   1.423  -1.071   1.190  C10  Y2D   9  
Y2D  C12  C10  C  0  1  Y  N  N   6.219  -3.322  -33.015   3.314   1.913   0.513  C12  Y2D  10  
Y2D  C13  C11  C  0  1  Y  N  N   6.926  -4.289  -33.867   4.424   2.729  -0.039  C13  Y2D  11  
Y2D  N1   N1   N  0  1  N  N  N   1.161  -1.686  -31.842   1.992  -3.284   0.374  N1   Y2D  12  
Y2D  N2   N2   N  0  1  Y  N  N   4.733  -2.072  -32.001   2.007   0.266   1.051  N2   Y2D  13  
Y2D  C3   C12  C  0  1  Y  N  N   5.714   3.937  -30.198  -4.393   1.607  -0.249  C3   Y2D  14  
Y2D  N3   N3   N  0  1  Y  N  N   6.863  -2.422  -32.212   2.264   2.356   1.229  N3   Y2D  15  
Y2D  C1   C13  C  0  1  N  N  N   5.377   6.405  -30.120  -6.832   1.156   0.086  C1   Y2D  16  
Y2D  C15  C14  C  0  1  Y  N  N   8.936  -5.217  -34.771   5.512   4.828  -0.377  C15  Y2D  17  
Y2D  C16  C15  C  0  1  Y  N  N   8.163  -6.052  -35.539   6.489   4.160  -1.092  C16  Y2D  18  
Y2D  C17  C16  C  0  1  Y  N  N   6.241  -5.174  -34.688   5.449   2.129  -0.766  C17  Y2D  19  
Y2D  C18  C17  C  0  1  N  N  N  -0.105  -1.961  -31.501   2.656  -4.424   0.094  C18  Y2D  20  
Y2D  C19  C18  C  0  1  N  N  N  -0.412  -2.919  -30.603   2.004  -5.478  -0.697  C19  Y2D  21  
Y2D  C2   C19  C  0  1  Y  N  N   5.188   5.078  -30.777  -5.431   0.694  -0.220  C2   Y2D  22  
Y2D  C20  C20  C  0  1  N  N  N  -1.658  -3.177  -30.262   2.659  -6.603  -0.974  C20  Y2D  23  
Y2D  C21  C21  C  0  1  Y  N  N   4.293   3.758  -32.557  -3.896  -1.068  -0.742  C21  Y2D  24  
Y2D  C22  C22  C  0  1  Y  N  N   4.470   4.991  -31.954  -5.184  -0.642  -0.473  C22  Y2D  25  
Y2D  F1   F1   F  0  1  N  N  N   5.525   7.396  -30.998  -6.781   2.271   0.930  F1   Y2D  26  
Y2D  F2   F2   F  0  1  N  N  N   6.447   6.441  -29.350  -7.480   1.503  -1.105  F2   Y2D  27  
Y2D  F3   F3   F  0  1  N  N  N   4.356   6.746  -29.345  -7.536   0.125   0.717  F3   Y2D  28  
Y2D  N4   N4   N  0  1  Y  N  N   5.971  -1.663  -31.604   1.518   1.354   1.533  N4   Y2D  29  
Y2D  N5   N5   N  0  1  Y  N  N   6.828  -6.051  -35.512   6.430   2.853  -1.266  N5   Y2D  30  
Y2D  O1   O1   O  0  1  N  N  N   3.284   0.868  -32.430  -0.794  -0.964   0.135  O1   Y2D  31  
Y2D  O2   O2   O  0  1  N  N  N  -0.996  -1.313  -32.041   3.793  -4.579   0.496  O2   Y2D  32  
Y2D  H2   H1   H  0  1  N  N  N   5.941   1.820  -30.359  -2.296   1.896  -0.552  H2   Y2D  33  
Y2D  H12  H2   H  0  1  N  N  N   8.907  -3.643  -33.321   3.679   4.609   0.722  H12  Y2D  34  
Y2D  H4   H3   H  0  1  N  N  N   5.319   0.533  -32.209  -1.497  -1.488  -1.736  H4   Y2D  35  
Y2D  H3   H4   H  0  1  N  N  N   4.825   1.345  -33.733  -0.911   0.185  -1.578  H3   Y2D  36  
Y2D  H11  H5   H  0  1  N  N  N   4.087  -3.573  -33.418   3.803  -0.127  -0.120  H11  Y2D  37  
Y2D  H5   H6   H  0  1  N  N  N   3.470  -0.811  -33.650   0.980  -1.006  -0.957  H5   Y2D  38  
Y2D  H7   H7   H  0  1  N  N  N   1.015   0.324  -32.524  -0.103  -3.378   0.661  H7   Y2D  39  
Y2D  H6   H8   H  0  1  N  N  N   1.200  -0.905  -33.821   0.427  -3.352  -1.049  H6   Y2D  40  
Y2D  H8   H9   H  0  1  N  N  N   2.257  -2.819  -30.406   3.415  -1.758   0.669  H8   Y2D  41  
Y2D  H9   H10  H  0  1  N  N  N   2.487  -3.333  -32.112   2.759  -2.477   2.165  H9   Y2D  42  
Y2D  H10  H11  H  0  1  N  N  N   3.592  -0.905  -30.657   0.840  -1.144   2.108  H10  Y2D  43  
Y2D  H1   H12  H  0  1  N  N  N   6.264   4.003  -29.271  -4.586   2.651  -0.052  H1   Y2D  44  
Y2D  H13  H13  H  0  1  N  N  N  10.014  -5.264  -34.827   5.570   5.898  -0.242  H13  Y2D  45  
Y2D  H14  H14  H  0  1  N  N  N   8.661  -6.746  -36.200   7.310   4.716  -1.519  H14  Y2D  46  
Y2D  H15  H15  H  0  1  N  N  N   5.162  -5.154  -34.660   5.436   1.062  -0.929  H15  Y2D  47  
Y2D  H16  H16  H  0  1  N  N  N   0.385  -3.490  -30.151   0.994  -5.340  -1.054  H16  Y2D  48  
Y2D  H18  H17  H  0  1  N  N  N  -1.871  -3.951  -29.539   3.669  -6.741  -0.617  H18  Y2D  49  
Y2D  H17  H18  H  0  1  N  N  N  -2.467  -2.615  -30.705   2.181  -7.377  -1.555  H17  Y2D  50  
Y2D  H19  H19  H  0  1  N  N  N   3.726   3.690  -33.474  -3.702  -2.113  -0.934  H19  Y2D  51  
Y2D  H20  H20  H  0  1  N  N  N   4.049   5.880  -32.401  -5.994  -1.356  -0.446  H20  Y2D  52  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
Y2D  C16  N5   DOUB  Y  N   1  
Y2D  C16  C15  SING  Y  N   2  
Y2D  N5   C17  SING  Y  N   3  
Y2D  C15  C14  DOUB  Y  N   4  
Y2D  C17  C13  DOUB  Y  N   5  
Y2D  C14  C13  SING  Y  N   6  
Y2D  C13  C12  SING  N  N   7  
Y2D  C12  C11  DOUB  Y  N   8  
Y2D  C12  N3   SING  Y  N   9  
Y2D  C11  N2   SING  Y  N  10  
Y2D  C8   C7   SING  N  N  11  
Y2D  C8   N1   SING  N  N  12  
Y2D  C7   O1   SING  N  N  13  
Y2D  C7   C10  SING  N  N  14  
Y2D  C6   O1   SING  N  N  15  
Y2D  C6   C5   SING  N  N  16  
Y2D  C21  C5   DOUB  Y  N  17  
Y2D  C21  C22  SING  Y  N  18  
Y2D  N3   N4   DOUB  Y  N  19  
Y2D  O2   C18  DOUB  N  N  20  
Y2D  C5   C4   SING  Y  N  21  
Y2D  N2   N4   SING  Y  N  22  
Y2D  N2   C10  SING  N  N  23  
Y2D  C22  C2   DOUB  Y  N  24  
Y2D  N1   C18  SING  N  N  25  
Y2D  N1   C9   SING  N  N  26  
Y2D  C10  C9   SING  N  N  27  
Y2D  C18  C19  SING  N  N  28  
Y2D  F1   C1   SING  N  N  29  
Y2D  C4   C3   DOUB  Y  N  30  
Y2D  C2   C3   SING  Y  N  31  
Y2D  C2   C1   SING  N  N  32  
Y2D  C19  C20  DOUB  N  N  33  
Y2D  C1   F2   SING  N  N  34  
Y2D  C1   F3   SING  N  N  35  
Y2D  C4   H2   SING  N  N  36  
Y2D  C14  H12  SING  N  N  37  
Y2D  C6   H4   SING  N  N  38  
Y2D  C6   H3   SING  N  N  39  
Y2D  C11  H11  SING  N  N  40  
Y2D  C7   H5   SING  N  N  41  
Y2D  C8   H7   SING  N  N  42  
Y2D  C8   H6   SING  N  N  43  
Y2D  C9   H8   SING  N  N  44  
Y2D  C9   H9   SING  N  N  45  
Y2D  C10  H10  SING  N  N  46  
Y2D  C3   H1   SING  N  N  47  
Y2D  C15  H13  SING  N  N  48  
Y2D  C16  H14  SING  N  N  49  
Y2D  C17  H15  SING  N  N  50  
Y2D  C19  H16  SING  N  N  51  
Y2D  C20  H18  SING  N  N  52  
Y2D  C20  H17  SING  N  N  53  
Y2D  C21  H19  SING  N  N  54  
Y2D  C22  H20  SING  N  N  55  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
Y2D  SMILES            ACDLabs               12.01  "c1cc(C(F)(F)F)ccc1COC2C(CN(C2)C(\C=C)=O)n3cc(nn3)c4cccnc4"  
Y2D  InChI             InChI                 1.03   "InChI=1S/C22H20F3N5O2/c1-2-21(31)29-12-19(30-11-18(27-28-30)16-4-3-9-26-10-16)20(13-29)32-14-15-5-7-17(8-6-15)22(23,24)25/h2-11,19-20H,1,12-14H2/t19-,20-/m1/s1"  
Y2D  InChIKey          InChI                 1.03   AZGCPBIUNCLWPF-WOJBJXKFSA-N  
Y2D  SMILES_CANONICAL  CACTVS                3.385  "FC(F)(F)c1ccc(CO[C@@H]2CN(C[C@H]2n3cc(nn3)c4cccnc4)C(=O)C=C)cc1"  
Y2D  SMILES            CACTVS                3.385  "FC(F)(F)c1ccc(CO[CH]2CN(C[CH]2n3cc(nn3)c4cccnc4)C(=O)C=C)cc1"  
Y2D  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "C=CC(=O)N1C[C@H]([C@@H](C1)OCc2ccc(cc2)C(F)(F)F)n3cc(nn3)c4cccnc4"  
Y2D  SMILES            "OpenEye OEToolkits"  2.0.7  "C=CC(=O)N1CC(C(C1)OCc2ccc(cc2)C(F)(F)F)n3cc(nn3)c4cccnc4"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
Y2D  "SYSTEMATIC NAME"  ACDLabs               12.01  "1-[(3R,4R)-3-[4-(pyridin-3-yl)-1H-1,2,3-triazol-1-yl]-4-{[4-(trifluoromethyl)phenyl]methoxy}pyrrolidin-1-yl]prop-2-en-1-one"  
Y2D  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "1-[(3~{R},4~{R})-3-(4-pyridin-3-yl-1,2,3-triazol-1-yl)-4-[[4-(trifluoromethyl)phenyl]methoxy]pyrrolidin-1-yl]prop-2-en-1-one"  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     Y2D
_pdbx_chem_comp_synonyms.name        "1-[(3~{R},4~{R})-3-(4-pyridin-3-yl-1,2,3-triazol-1-yl)-4-[[4-(trifluoromethyl)phenyl]methoxy]pyrrolidin-1-yl]prop-2-en-1-one"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
Y2D  "Create component"  2021-01-28  RCSB  
Y2D  "Modify synonyms"   2021-01-29  RCSB  
Y2D  "Initial release"   2022-02-02  RCSB  
##
