data_Y48
#

_chem_comp.id                                   Y48
_chem_comp.name                                 "(1S,2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]-2-[(N-{[(2,4,5-trifluorophenyl)methoxy]carbonyl}-L-leucyl)amino]propane-1-sulfonic acid"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C21 H28 F3 N3 O8 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2022-01-19
_chem_comp.pdbx_modified_date                   2022-04-29
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       539.523
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    Y48
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  Y
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7TIY
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
Y48  C14  C1   C  0  1  N  N  N   6.774   1.242  25.782   0.479  -2.064  -2.268  C14  Y48   1  
Y48  C13  C2   C  0  1  N  N  N   7.521   1.558  24.485  -0.502  -1.761  -1.133  C13  Y48   2  
Y48  C12  C3   C  0  1  N  N  S   7.265   0.447  23.474  -0.268  -0.337  -0.624  C12  Y48   3  
Y48  C15  C4   C  0  1  N  N  N   7.132   2.301  26.823   0.330  -3.526  -2.693  C15  Y48   4  
Y48  C16  C5   C  0  1  N  N  N   5.276   1.288  25.527   0.178  -1.153  -3.460  C16  Y48   5  
Y48  C17  C6   C  0  1  N  N  N   7.990   0.855  22.195  -1.311   0.006   0.408  C17  Y48   6  
Y48  C1   C7   C  0  1  Y  N  N   8.483  -5.384  24.193   5.758   0.389  -0.338  C1   Y48   7  
Y48  C2   C8   C  0  1  Y  N  N   8.513  -6.705  23.742   6.962   0.620  -0.982  C2   Y48   8  
Y48  C3   C9   C  0  1  Y  N  N   9.017  -7.710  24.560   8.138   0.668  -0.253  C3   Y48   9  
Y48  C7   C10  C  0  1  N  N  N   7.938  -4.258  23.313   4.479   0.331  -1.133  C7   Y48  10  
Y48  C6   C11  C  0  1  Y  N  N   8.956  -5.075  25.462   5.729   0.205   1.031  C6   Y48  11  
Y48  C9   C12  C  0  1  N  N  N   7.720  -1.942  23.320   2.141  -0.010  -0.794  C9   Y48  12  
Y48  C5   C13  C  0  1  Y  N  N   9.459  -6.078  26.278   6.904   0.253   1.761  C5   Y48  13  
Y48  C4   C14  C  0  1  Y  N  N   9.491  -7.393  25.831   8.111   0.484   1.118  C4   Y48  14  
Y48  C20  C15  C  0  1  N  N  S   7.994   1.811  19.993  -3.632   0.323   1.078  C20  Y48  15  
Y48  C21  C16  C  0  1  N  N  S   7.745   3.305  19.769  -4.007  -0.937   1.863  C21  Y48  16  
Y48  C24  C17  C  0  1  N  N  N   7.495   1.024  18.776  -4.876   0.877   0.381  C24  Y48  17  
Y48  C25  C18  C  0  1  N  N  S   8.093  -0.427  18.789  -4.532   2.208  -0.291  C25  Y48  18  
Y48  C26  C19  C  0  1  N  N  N   9.581  -0.363  18.755  -4.171   3.273   0.770  C26  Y48  19  
Y48  C27  C20  C  0  1  N  N  N   9.940  -1.581  17.859  -4.777   4.553   0.152  C27  Y48  20  
Y48  C29  C21  C  0  1  N  N  N   7.636  -1.176  17.570  -5.747   2.776  -0.992  C29  Y48  21  
Y48  F1   F1   F  0  1  N  N  N   9.916  -5.771  27.507   6.876   0.073   3.100  F1   Y48  22  
Y48  F2   F2   F  0  1  N  N  N   8.056  -7.020  22.511   6.989   0.799  -2.321  F2   Y48  23  
Y48  F3   F3   F  0  1  N  N  N   9.983  -8.356  26.637   9.258   0.530   1.829  F3   Y48  24  
Y48  N11  N1   N  0  1  N  N  N   7.810  -0.789  23.986   1.064  -0.248  -0.019  N11  Y48  25  
Y48  N19  N2   N  0  1  N  N  N   7.298   1.401  21.203  -2.618  -0.010   0.076  N19  Y48  26  
Y48  N28  N3   N  0  1  N  N  N   8.661  -1.841  17.029  -5.863   4.090  -0.720  N28  Y48  27  
Y48  O10  O1   O  0  1  N  N  N   7.191  -1.999  22.234   2.008   0.131  -1.993  O10  Y48  28  
Y48  O18  O2   O  0  1  N  N  N   9.177   0.695  22.106  -0.976   0.296   1.536  O18  Y48  29  
Y48  O22  O3   O  0  1  N  N  N   8.320   3.849  18.852  -5.078  -0.638   2.760  O22  Y48  30  
Y48  O30  O4   O  0  1  N  N  N   6.523  -1.187  17.135  -6.504   2.141  -1.695  O30  Y48  31  
Y48  O8   O5   O  0  1  N  N  N   8.245  -3.020  23.883   3.365   0.072  -0.238  O8   Y48  32  
Y48  S1   S1   S  0  1  N  Y  N   5.956   3.619  19.607  -4.529  -2.235   0.709  S1   Y48  33  
Y48  H1   H1   H  0  1  N  N  N   7.063   0.245  26.147   1.498  -1.888  -1.924  H1   Y48  34  
Y48  H2   H2   H  0  1  N  N  N   8.600   1.628  24.690  -1.523  -1.851  -1.502  H2   Y48  35  
Y48  H3   H3   H  0  1  N  N  N   7.163   2.515  24.078  -0.346  -2.468  -0.319  H3   Y48  36  
Y48  H4   H4   H  0  1  N  N  N   6.186   0.355  23.281  -0.336   0.363  -1.457  H4   Y48  37  
Y48  H5   H5   H  0  1  N  N  N   6.601   2.087  27.762  -0.689  -3.703  -3.037  H5   Y48  38  
Y48  H6   H6   H  0  1  N  N  N   8.217   2.286  27.003   1.028  -3.743  -3.501  H6   Y48  39  
Y48  H7   H7   H  0  1  N  N  N   6.836   3.294  26.453   0.544  -4.175  -1.844  H7   Y48  40  
Y48  H8   H8   H  0  1  N  N  N   4.738   1.061  26.459   0.284  -0.111  -3.156  H8   Y48  41  
Y48  H9   H9   H  0  1  N  N  N   4.995   2.292  25.176   0.877  -1.369  -4.268  H9   Y48  42  
Y48  H10  H10  H  0  1  N  N  N   5.012   0.545  24.761  -0.841  -1.329  -3.803  H10  Y48  43  
Y48  H11  H11  H  0  1  N  N  N   9.041  -8.732  24.212   9.078   0.848  -0.755  H11  Y48  44  
Y48  H12  H12  H  0  1  N  N  N   6.846  -4.359  23.226   4.323   1.283  -1.641  H12  Y48  45  
Y48  H13  H13  H  0  1  N  N  N   8.393  -4.323  22.314   4.545  -0.468  -1.871  H13  Y48  46  
Y48  H14  H14  H  0  1  N  N  N   8.932  -4.054  25.813   4.790   0.025   1.532  H14  Y48  47  
Y48  H15  H15  H  0  1  N  N  N   9.075   1.643  20.107  -3.235   1.072   1.763  H15  Y48  48  
Y48  H16  H16  H  0  1  N  N  N   8.001   3.796  20.719  -3.143  -1.281   2.431  H16  Y48  49  
Y48  H17  H17  H  0  1  N  N  N   7.809   1.539  17.856  -5.217   0.168  -0.373  H17  Y48  50  
Y48  H18  H18  H  0  1  N  N  N   6.397   0.965  18.806  -5.665   1.035   1.116  H18  Y48  51  
Y48  H19  H19  H  0  1  N  N  N   7.756  -0.947  19.698  -3.711   2.078  -0.996  H19  Y48  52  
Y48  H20  H20  H  0  1  N  N  N  10.008  -0.469  19.763  -4.638   3.044   1.728  H20  Y48  53  
Y48  H21  H21  H  0  1  N  N  N   9.930   0.579  18.307  -3.090   3.365   0.878  H21  Y48  54  
Y48  H22  H22  H  0  1  N  N  N  10.188  -2.457  18.475  -5.171   5.200   0.935  H22  Y48  55  
Y48  H23  H23  H  0  1  N  N  N  10.789  -1.343  17.201  -4.023   5.083  -0.431  H23  Y48  56  
Y48  H24  H24  H  0  1  N  N  N   8.272  -0.780  24.873   1.171  -0.360   0.938  H24  Y48  57  
Y48  H25  H25  H  0  1  N  N  N   6.310   1.529  21.286  -2.886  -0.243  -0.827  H25  Y48  58  
Y48  H26  H26  H  0  1  N  N  N   8.609  -2.418  16.214  -6.572   4.659  -1.058  H26  Y48  59  
Y48  H27  H27  H  0  1  N  N  N   8.078   4.767  18.826  -5.882  -0.324   2.323  H27  Y48  60  
Y48  O2   O6   O  0  1  N  Y  N       ?       ?       ?  -4.991  -3.375   1.604  O2   Y48  61  
Y48  O1   O7   O  0  1  N  Y  N       ?       ?       ?  -5.702  -1.839   0.011  O1   Y48  62  
Y48  O3   O8   O  0  1  N  Y  N       ?       ?       ?  -3.408  -2.766   0.015  O3   Y48  63  
Y48  H28  H28  H  0  1  N  Y  N       ?       ?       ?  -5.305  -4.153   1.121  H28  Y48  64  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
Y48  N28  C29  SING  N  N   1  
Y48  N28  C27  SING  N  N   2  
Y48  O30  C29  DOUB  N  N   3  
Y48  C29  C25  SING  N  N   4  
Y48  C27  C26  SING  N  N   5  
Y48  C26  C25  SING  N  N   6  
Y48  C24  C25  SING  N  N   7  
Y48  C24  C20  SING  N  N   8  
Y48  O22  C21  SING  N  N   9  
Y48  C21  C20  SING  N  N  10  
Y48  C20  N19  SING  N  N  11  
Y48  N19  C17  SING  N  N  12  
Y48  O18  C17  DOUB  N  N  13  
Y48  C17  C12  SING  N  N  14  
Y48  O10  C9   DOUB  N  N  15  
Y48  F2   C2   SING  N  N  16  
Y48  C7   O8   SING  N  N  17  
Y48  C7   C1   SING  N  N  18  
Y48  C9   O8   SING  N  N  19  
Y48  C9   N11  SING  N  N  20  
Y48  C12  N11  SING  N  N  21  
Y48  C12  C13  SING  N  N  22  
Y48  C2   C1   DOUB  Y  N  23  
Y48  C2   C3   SING  Y  N  24  
Y48  C1   C6   SING  Y  N  25  
Y48  C13  C14  SING  N  N  26  
Y48  C3   C4   DOUB  Y  N  27  
Y48  C6   C5   DOUB  Y  N  28  
Y48  C16  C14  SING  N  N  29  
Y48  C14  C15  SING  N  N  30  
Y48  C4   C5   SING  Y  N  31  
Y48  C4   F3   SING  N  N  32  
Y48  C5   F1   SING  N  N  33  
Y48  C21  S1   SING  N  N  34  
Y48  C14  H1   SING  N  N  35  
Y48  C13  H2   SING  N  N  36  
Y48  C13  H3   SING  N  N  37  
Y48  C12  H4   SING  N  N  38  
Y48  C15  H5   SING  N  N  39  
Y48  C15  H6   SING  N  N  40  
Y48  C15  H7   SING  N  N  41  
Y48  C16  H8   SING  N  N  42  
Y48  C16  H9   SING  N  N  43  
Y48  C16  H10  SING  N  N  44  
Y48  C3   H11  SING  N  N  45  
Y48  C7   H12  SING  N  N  46  
Y48  C7   H13  SING  N  N  47  
Y48  C6   H14  SING  N  N  48  
Y48  C20  H15  SING  N  N  49  
Y48  C21  H16  SING  N  N  50  
Y48  C24  H17  SING  N  N  51  
Y48  C24  H18  SING  N  N  52  
Y48  C25  H19  SING  N  N  53  
Y48  C26  H20  SING  N  N  54  
Y48  C26  H21  SING  N  N  55  
Y48  C27  H22  SING  N  N  56  
Y48  C27  H23  SING  N  N  57  
Y48  N11  H24  SING  N  N  58  
Y48  N19  H25  SING  N  N  59  
Y48  N28  H26  SING  N  N  60  
Y48  O22  H27  SING  N  N  61  
Y48  S1   O2   SING  N  N  62  
Y48  S1   O1   DOUB  N  N  63  
Y48  S1   O3   DOUB  N  N  64  
Y48  O2   H28  SING  N  N  65  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
Y48  SMILES            ACDLabs               12.01  "CC(C)CC(NC(=O)OCc1cc(F)c(F)cc1F)C(=O)NC(CC1CCNC1=O)C(O)S(=O)(=O)O"  
Y48  InChI             InChI                 1.03   "InChI=1S/C21H28F3N3O8S/c1-10(2)5-16(27-21(31)35-9-12-6-14(23)15(24)8-13(12)22)19(29)26-17(20(30)36(32,33)34)7-11-3-4-25-18(11)28/h6,8,10-11,16-17,20,30H,3-5,7,9H2,1-2H3,(H,25,28)(H,26,29)(H,27,31)(H,32,33,34)/t11-,16-,17-,20-/m0/s1"  
Y48  InChIKey          InChI                 1.03   UQJSPTNSSUFGMT-IREPMIDKSA-N  
Y48  SMILES_CANONICAL  CACTVS                3.385  "CC(C)C[C@H](NC(=O)OCc1cc(F)c(F)cc1F)C(=O)N[C@@H](C[C@@H]2CCNC2=O)[C@@H](O)[S](O)(=O)=O"  
Y48  SMILES            CACTVS                3.385  "CC(C)C[CH](NC(=O)OCc1cc(F)c(F)cc1F)C(=O)N[CH](C[CH]2CCNC2=O)[CH](O)[S](O)(=O)=O"  
Y48  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CC(C)C[C@@H](C(=O)N[C@@H](C[C@@H]1CCNC1=O)[C@@H](O)S(=O)(=O)O)NC(=O)OCc2cc(c(cc2F)F)F"  
Y48  SMILES            "OpenEye OEToolkits"  2.0.7  "CC(C)CC(C(=O)NC(CC1CCNC1=O)C(O)S(=O)(=O)O)NC(=O)OCc2cc(c(cc2F)F)F"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
Y48  "SYSTEMATIC NAME"  ACDLabs               12.01  "(1S,2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]-2-[(N-{[(2,4,5-trifluorophenyl)methoxy]carbonyl}-L-leucyl)amino]propane-1-sulfonic acid"  
Y48  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "(1~{S},2~{S})-2-[[(2~{S})-4-methyl-2-[[2,4,5-tris(fluoranyl)phenyl]methoxycarbonylamino]pentanoyl]amino]-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propane-1-sulfonic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
Y48  "Create component"  2022-01-19  RCSB  
Y48  "Initial release"   2022-05-04  RCSB  
##
