data_YHI
#

_chem_comp.id                                   YHI
_chem_comp.name                                 "benzyl (1R,2S,5S)-2-({(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}carbamoyl)-6,6-dimethyl-3-azabicyclo[3.1.0]hexane-3-carboxylate"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C23 H31 N3 O5"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-03-08
_chem_comp.pdbx_modified_date                   2021-03-12
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       429.509
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    YHI
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7LYI
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
YHI  C10  C1   C  0  1  Y  N  N   -5.099  -23.860  -23.141   7.699   1.840   0.921  C10  YHI   1  
YHI  C15  C2   C  0  1  N  N  R  -11.890  -28.471  -23.012  -0.205  -2.832  -0.378  C15  YHI   2  
YHI  C17  C3   C  0  1  N  N  N  -14.194  -27.465  -22.503   1.956  -2.711  -1.853  C17  YHI   3  
YHI  C21  C4   C  0  1  N  N  S   -7.903  -29.094  -20.115  -3.519  -0.256   1.282  C21  YHI   4  
YHI  C22  C5   C  0  1  N  N  N   -7.291  -28.139  -19.042  -4.769   0.246   0.556  C22  YHI   5  
YHI  C24  C6   C  0  1  N  N  N   -6.072  -26.357  -20.457  -3.929   2.629   0.497  C24  YHI   6  
YHI  C01  C7   C  0  1  N  N  S  -12.122  -27.621  -24.252   0.970  -3.169   0.564  C01  YHI   7  
YHI  C02  C8   C  0  1  N  N  N  -11.247  -26.410  -24.104   1.542  -1.805   1.007  C02  YHI   8  
YHI  N03  N1   N  0  1  N  N  N  -10.942  -26.308  -22.665   1.124  -0.862  -0.056  N03  YHI   9  
YHI  C04  C9   C  0  1  N  N  N  -10.407  -25.256  -22.144   1.837   0.148  -0.593  C04  YHI  10  
YHI  O05  O1   O  0  1  N  N  N  -10.297  -24.126  -22.950   3.089   0.391  -0.163  O05  YHI  11  
YHI  C06  C10  C  0  1  N  N  N   -9.303  -23.119  -22.611   3.798   1.494  -0.787  C06  YHI  12  
YHI  C07  C11  C  0  1  Y  N  N   -7.827  -23.476  -22.782   5.174   1.613  -0.182  C07  YHI  13  
YHI  C08  C12  C  0  1  Y  N  N   -6.841  -22.546  -22.289   6.234   0.921  -0.736  C08  YHI  14  
YHI  C09  C13  C  0  1  Y  N  N   -5.513  -22.745  -22.442   7.496   1.030  -0.181  C09  YHI  15  
YHI  C11  C14  C  0  1  Y  N  N   -5.968  -24.812  -23.670   6.639   2.535   1.472  C11  YHI  16  
YHI  C12  C15  C  0  1  Y  N  N   -7.334  -24.597  -23.534   5.376   2.422   0.920  C12  YHI  17  
YHI  O13  O2   O  0  1  N  N  N   -9.998  -25.185  -21.019   1.350   0.839  -1.466  O13  YHI  18  
YHI  C14  C16  C  0  1  N  N  S  -11.029  -27.661  -22.114  -0.250  -1.289  -0.421  C14  YHI  19  
YHI  C16  C17  C  0  1  N  N  N  -13.337  -28.364  -23.496   1.022  -3.534  -0.963  C16  YHI  20  
YHI  C18  C18  C  0  1  N  N  N  -14.004  -29.462  -24.034   0.885  -5.010  -1.340  C18  YHI  21  
YHI  C19  C19  C  0  1  N  N  N   -9.551  -28.160  -21.837  -1.240  -0.764   0.586  C19  YHI  22  
YHI  N20  N2   N  0  1  N  N  N   -9.237  -28.657  -20.495  -2.557  -0.766   0.302  N20  YHI  23  
YHI  C23  C20  C  0  1  N  N  S   -7.126  -26.653  -19.344  -4.396   1.422  -0.349  C23  YHI  24  
YHI  C25  C21  C  0  1  N  N  N   -5.160  -25.291  -19.973  -4.503   3.817  -0.307  C25  YHI  25  
YHI  N26  N3   N  0  1  N  N  N   -5.535  -25.095  -18.491  -5.654   3.276  -1.039  N26  YHI  26  
YHI  C27  C22  C  0  1  N  N  N   -6.683  -25.835  -18.144  -5.616   1.933  -1.083  C27  YHI  27  
YHI  O28  O3   O  0  1  N  N  N   -7.214  -25.823  -17.054  -6.440   1.232  -1.633  O28  YHI  28  
YHI  C29  C23  C  0  1  N  N  N   -8.028  -30.456  -19.676  -3.906  -1.377   2.249  C29  YHI  29  
YHI  O30  O4   O  0  1  N  N  N   -6.614  -30.844  -19.427  -4.601  -2.402   1.536  O30  YHI  30  
YHI  O31  O5   O  0  1  N  N  N   -8.630  -28.129  -22.667  -0.851  -0.340   1.654  O31  YHI  31  
YHI  H1   H1   H  0  1  N  N  N   -4.039  -24.003  -23.287   8.684   1.925   1.354  H1   YHI  32  
YHI  H2   H2   H  0  1  N  N  N  -11.446  -29.447  -23.257  -1.155  -3.364  -0.325  H2   YHI  33  
YHI  H3   H3   H  0  1  N  N  N  -14.989  -28.075  -22.049   2.782  -3.337  -2.190  H3   YHI  34  
YHI  H4   H4   H  0  1  N  N  N  -13.541  -27.067  -21.713   1.403  -2.343  -2.718  H4   YHI  35  
YHI  H5   H5   H  0  1  N  N  N  -14.645  -26.631  -23.061   2.347  -1.866  -1.286  H5   YHI  36  
YHI  H6   H6   H  0  1  N  N  N   -7.251  -29.059  -21.000  -3.069   0.566   1.839  H6   YHI  37  
YHI  H7   H7   H  0  1  N  N  N   -7.931  -28.212  -18.151  -5.186  -0.560  -0.048  H7   YHI  38  
YHI  H8   H8   H  0  1  N  N  N   -6.289  -28.528  -18.806  -5.509   0.571   1.288  H8   YHI  39  
YHI  H9   H9   H  0  1  N  N  N   -6.583  -26.021  -21.371  -4.358   2.592   1.498  H9   YHI  40  
YHI  H10  H10  H  0  1  N  N  N   -5.495  -27.268  -20.673  -2.841   2.677   0.541  H10  YHI  41  
YHI  H11  H11  H  0  1  N  N  N  -11.860  -28.184  -25.160   0.934  -3.967   1.306  H11  YHI  42  
YHI  H12  H12  H  0  1  N  N  N  -10.321  -26.534  -24.684   1.119  -1.509   1.966  H12  YHI  43  
YHI  H13  H13  H  0  1  N  N  N  -11.778  -25.510  -24.448   2.629  -1.851   1.067  H13  YHI  44  
YHI  H14  H14  H  0  1  N  N  N   -9.501  -22.240  -23.241   3.887   1.310  -1.857  H14  YHI  45  
YHI  H15  H15  H  0  1  N  N  N   -9.454  -22.854  -21.554   3.247   2.420  -0.621  H15  YHI  46  
YHI  H16  H16  H  0  1  N  N  N   -7.177  -21.656  -21.778   6.078   0.295  -1.602  H16  YHI  47  
YHI  H17  H17  H  0  1  N  N  N   -4.796  -22.051  -22.029   8.323   0.483  -0.609  H17  YHI  48  
YHI  H18  H18  H  0  1  N  N  N   -5.591  -25.691  -24.171   6.797   3.168   2.333  H18  YHI  49  
YHI  H19  H19  H  0  1  N  N  N   -8.032  -25.279  -23.998   4.548   2.965   1.351  H19  YHI  50  
YHI  H20  H20  H  0  1  N  N  N  -11.529  -27.599  -21.136  -0.508  -0.945  -1.423  H20  YHI  51  
YHI  H21  H21  H  0  1  N  N  N  -14.789  -29.792  -23.338   0.614  -5.588  -0.456  H21  YHI  52  
YHI  H22  H22  H  0  1  N  N  N  -14.460  -29.179  -24.994   0.109  -5.121  -2.098  H22  YHI  53  
YHI  H23  H23  H  0  1  N  N  N  -13.289  -30.282  -24.195   1.833  -5.374  -1.735  H23  YHI  54  
YHI  H24  H24  H  0  1  N  N  N   -9.968  -28.697  -19.814  -2.869  -1.106  -0.552  H24  YHI  55  
YHI  H25  H25  H  0  1  N  N  N   -8.095  -26.263  -19.688  -3.619   1.127  -1.055  H25  YHI  56  
YHI  H26  H26  H  0  1  N  N  N   -4.110  -25.606  -20.069  -4.825   4.609   0.369  H26  YHI  57  
YHI  H27  H27  H  0  1  N  N  N   -8.627  -30.524  -18.756  -3.006  -1.794   2.700  H27  YHI  58  
YHI  H28  H28  H  0  1  N  N  N   -8.482  -31.085  -20.456  -4.552  -0.976   3.030  H28  YHI  59  
YHI  H29  H29  H  0  1  N  N  N   -6.580  -31.745  -19.127  -4.877  -3.147   2.087  H29  YHI  60  
YHI  H30  H30  H  0  1  N  N  N   -5.317  -24.361  -20.539  -3.756   4.196  -1.005  H30  YHI  61  
YHI  H31  H31  H  0  1  N  N  N   -5.027  -24.515  -17.855  -6.351   3.817  -1.440  H31  YHI  62  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
YHI  C01  C02  SING  N  N   1  
YHI  C01  C16  SING  N  N   2  
YHI  C01  C15  SING  N  N   3  
YHI  C02  N03  SING  N  N   4  
YHI  C18  C16  SING  N  N   5  
YHI  C11  C12  DOUB  Y  N   6  
YHI  C11  C10  SING  Y  N   7  
YHI  C12  C07  SING  Y  N   8  
YHI  C16  C15  SING  N  N   9  
YHI  C16  C17  SING  N  N  10  
YHI  C10  C09  DOUB  Y  N  11  
YHI  C15  C14  SING  N  N  12  
YHI  O05  C06  SING  N  N  13  
YHI  O05  C04  SING  N  N  14  
YHI  C07  C06  SING  N  N  15  
YHI  C07  C08  DOUB  Y  N  16  
YHI  O31  C19  DOUB  N  N  17  
YHI  N03  C04  SING  N  N  18  
YHI  N03  C14  SING  N  N  19  
YHI  C09  C08  SING  Y  N  20  
YHI  C04  O13  DOUB  N  N  21  
YHI  C14  C19  SING  N  N  22  
YHI  C19  N20  SING  N  N  23  
YHI  N20  C21  SING  N  N  24  
YHI  C24  C25  SING  N  N  25  
YHI  C24  C23  SING  N  N  26  
YHI  C21  C29  SING  N  N  27  
YHI  C21  C22  SING  N  N  28  
YHI  C25  N26  SING  N  N  29  
YHI  C29  O30  SING  N  N  30  
YHI  C23  C22  SING  N  N  31  
YHI  C23  C27  SING  N  N  32  
YHI  N26  C27  SING  N  N  33  
YHI  C27  O28  DOUB  N  N  34  
YHI  C10  H1   SING  N  N  35  
YHI  C15  H2   SING  N  N  36  
YHI  C17  H3   SING  N  N  37  
YHI  C17  H4   SING  N  N  38  
YHI  C17  H5   SING  N  N  39  
YHI  C21  H6   SING  N  N  40  
YHI  C22  H7   SING  N  N  41  
YHI  C22  H8   SING  N  N  42  
YHI  C24  H9   SING  N  N  43  
YHI  C24  H10  SING  N  N  44  
YHI  C01  H11  SING  N  N  45  
YHI  C02  H12  SING  N  N  46  
YHI  C02  H13  SING  N  N  47  
YHI  C06  H14  SING  N  N  48  
YHI  C06  H15  SING  N  N  49  
YHI  C08  H16  SING  N  N  50  
YHI  C09  H17  SING  N  N  51  
YHI  C11  H18  SING  N  N  52  
YHI  C12  H19  SING  N  N  53  
YHI  C14  H20  SING  N  N  54  
YHI  C18  H21  SING  N  N  55  
YHI  C18  H22  SING  N  N  56  
YHI  C18  H23  SING  N  N  57  
YHI  N20  H24  SING  N  N  58  
YHI  C23  H25  SING  N  N  59  
YHI  C25  H26  SING  N  N  60  
YHI  C29  H27  SING  N  N  61  
YHI  C29  H28  SING  N  N  62  
YHI  O30  H29  SING  N  N  63  
YHI  C25  H30  SING  N  N  64  
YHI  N26  H31  SING  N  N  65  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
YHI  SMILES            ACDLabs               12.01  "O=C1NCCC1CC(CO)NC(=O)C1C2C(CN1C(=O)OCc1ccccc1)C2(C)C"  
YHI  InChI             InChI                 1.03   "InChI=1S/C23H31N3O5/c1-23(2)17-11-26(22(30)31-13-14-6-4-3-5-7-14)19(18(17)23)21(29)25-16(12-27)10-15-8-9-24-20(15)28/h3-7,15-19,27H,8-13H2,1-2H3,(H,24,28)(H,25,29)/t15-,16-,17-,18-,19-/m0/s1"  
YHI  InChIKey          InChI                 1.03   KXNVRILCTPCDNL-VMXHOPILSA-N  
YHI  SMILES_CANONICAL  CACTVS                3.385  "CC1(C)[C@H]2CN([C@@H]([C@@H]12)C(=O)N[C@H](CO)C[C@@H]3CCNC3=O)C(=O)OCc4ccccc4"  
YHI  SMILES            CACTVS                3.385  "CC1(C)[CH]2CN([CH]([CH]12)C(=O)N[CH](CO)C[CH]3CCNC3=O)C(=O)OCc4ccccc4"  
YHI  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CC1([C@@H]2[C@H]1[C@H](N(C2)C(=O)OCc3ccccc3)C(=O)N[C@@H](C[C@@H]4CCNC4=O)CO)C"  
YHI  SMILES            "OpenEye OEToolkits"  2.0.7  "CC1(C2C1C(N(C2)C(=O)OCc3ccccc3)C(=O)NC(CC4CCNC4=O)CO)C"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
YHI  "SYSTEMATIC NAME"  ACDLabs               12.01  "benzyl (1R,2S,5S)-2-({(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}carbamoyl)-6,6-dimethyl-3-azabicyclo[3.1.0]hexane-3-carboxylate"  
YHI  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "(phenylmethyl) (1~{R},2~{S},5~{S})-6,6-dimethyl-2-[[(2~{S})-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]carbamoyl]-3-azabicyclo[3.1.0]hexane-3-carboxylate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
YHI  "Create component"  2021-03-08  RCSB  
YHI  "Initial release"   2021-03-17  RCSB  
##
