data_YHJ
#

_chem_comp.id                                   YHJ
_chem_comp.name                                 "benzyl (1S,3aR,6aS)-1-({(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}carbamoyl)hexahydrocyclopenta[c]pyrrole-2(1H)-carboxylate"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C23 H31 N3 O5"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-03-08
_chem_comp.pdbx_modified_date                   2021-03-12
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       429.509
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    YHJ
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7LYH
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
YHJ  C10  C1   C  0  1  Y  N  N  -21.193   5.415  16.227   5.816   1.392  -1.051  C10  YHJ   1  
YHJ  C13  C2   C  0  1  N  N  R  -21.009  -0.936  16.579   0.518  -3.226   0.353  C13  YHJ   2  
YHJ  C15  C3   C  0  1  N  N  N  -19.252  -1.815  18.174  -0.023  -4.663  -1.587  C15  YHJ   3  
YHJ  C17  C4   C  0  1  N  N  S  -20.219  -1.605  15.946  -0.760  -2.680  -0.357  C17  YHJ   4  
YHJ  C21  C5   C  0  1  N  N  S  -17.732  -2.028  11.956  -3.262   0.487   1.633  C21  YHJ   5  
YHJ  C22  C6   C  0  1  N  N  N  -16.641  -1.118  11.262  -4.486   1.204   1.060  C22  YHJ   6  
YHJ  C24  C7   C  0  1  N  N  N  -18.410   0.299   9.917  -5.243   3.133  -0.387  C24  YHJ   7  
YHJ  O01  O1   O  0  1  N  N  N  -18.218   1.837  14.235   0.925   1.264  -0.369  O01  YHJ   8  
YHJ  C02  C8   C  0  1  N  N  N  -19.140   1.920  14.977   1.572   0.241  -0.263  C02  YHJ   9  
YHJ  O03  O2   O  0  1  N  N  N  -19.635   3.138  15.541   2.909   0.302  -0.121  O03  YHJ  10  
YHJ  C04  C9   C  0  1  N  N  N  -19.615   4.188  14.614   3.511   1.624  -0.103  C04  YHJ  11  
YHJ  C05  C10  C  0  1  Y  N  N  -20.182   5.466  15.244   5.003   1.494   0.062  C05  YHJ  12  
YHJ  C06  C11  C  0  1  Y  N  N  -19.716   6.681  14.789   5.559   1.477   1.328  C06  YHJ  13  
YHJ  C07  C12  C  0  1  Y  N  N  -20.208   7.858  15.320   6.928   1.358   1.480  C07  YHJ  14  
YHJ  C08  C13  C  0  1  Y  N  N  -21.194   7.811  16.282   7.741   1.256   0.366  C08  YHJ  15  
YHJ  C09  C14  C  0  1  Y  N  N  -21.676   6.598  16.742   7.185   1.273  -0.899  C09  YHJ  16  
YHJ  N11  N1   N  0  1  N  N  N  -19.806   0.694  15.346   0.951  -0.954  -0.287  N11  YHJ  17  
YHJ  C12  C15  C  0  1  N  N  N  -21.021   0.549  15.875   1.610  -2.266  -0.169  C12  YHJ  18  
YHJ  C14  C16  C  0  1  N  N  N  -20.394  -0.884  18.143   0.737  -4.622  -0.251  C14  YHJ  19  
YHJ  C16  C17  C  0  1  N  N  N  -19.263  -2.486  17.037  -0.652  -3.271  -1.781  C16  YHJ  20  
YHJ  C18  C18  C  0  1  N  N  S  -19.202  -0.601  15.241  -0.496  -1.164  -0.436  C18  YHJ  21  
YHJ  C19  C19  C  0  1  N  N  N  -19.118  -0.974  13.827  -1.231  -0.459   0.675  C19  YHJ  22  
YHJ  N20  N2   N  0  1  N  N  N  -17.888  -1.567  13.377  -2.547  -0.198   0.553  N20  YHJ  23  
YHJ  C23  C20  C  0  1  N  N  S  -17.098   0.306  10.927  -4.030   2.312   0.109  C23  YHJ  24  
YHJ  C25  C21  C  0  1  N  N  N  -18.340   1.436   9.233  -5.585   2.420  -1.714  C25  YHJ  25  
YHJ  N26  N3   N  0  1  N  N  N  -16.819   1.785   9.182  -4.332   1.798  -2.158  N26  YHJ  26  
YHJ  C27  C22  C  0  1  N  N  N  -16.125   0.966  10.288  -3.443   1.719  -1.153  C27  YHJ  27  
YHJ  O28  O3   O  0  1  N  N  N  -14.967   0.996  10.551  -2.331   1.243  -1.244  O28  YHJ  28  
YHJ  C29  C23  C  0  1  N  N  N  -17.310  -3.516  12.054  -3.712  -0.537   2.676  C29  YHJ  29  
YHJ  O30  O4   O  0  1  N  N  N  -17.452  -4.078  10.810  -4.669  -1.423   2.092  O30  YHJ  30  
YHJ  O31  O5   O  0  1  N  N  N  -20.034  -0.798  13.083  -0.637  -0.127   1.680  O31  YHJ  31  
YHJ  H1   H1   H  0  1  N  N  N  -21.581   4.467  16.569   5.381   1.401  -2.040  H1   YHJ  32  
YHJ  H2   H2   H  0  1  N  N  N  -22.040  -1.318  16.622   0.437  -3.230   1.440  H2   YHJ  33  
YHJ  H3   H3   H  0  1  N  N  N  -18.311  -1.254  18.271   0.668  -4.877  -2.402  H3   YHJ  34  
YHJ  H4   H4   H  0  1  N  N  N  -19.354  -2.509  19.022  -0.803  -5.424  -1.549  H4   YHJ  35  
YHJ  H5   H5   H  0  1  N  N  N  -20.640  -2.299  15.204  -1.686  -2.931   0.159  H5   YHJ  36  
YHJ  H7   H7   H  0  1  N  N  N  -18.685  -1.942  11.413  -2.600   1.216   2.101  H7   YHJ  37  
YHJ  H8   H8   H  0  1  N  N  N  -15.776  -1.048  11.938  -5.103   0.489   0.515  H8   YHJ  38  
YHJ  H9   H9   H  0  1  N  N  N  -16.336  -1.607  10.325  -5.066   1.639   1.874  H9   YHJ  39  
YHJ  H10  H10  H  0  1  N  N  N  -18.365  -0.563   9.235  -6.073   3.066   0.317  H10  YHJ  40  
YHJ  H11  H11  H  0  1  N  N  N  -19.342   0.258  10.499  -4.966   4.172  -0.563  H11  YHJ  41  
YHJ  H12  H12  H  0  1  N  N  N  -18.578   4.370  14.295   3.293   2.135  -1.041  H12  YHJ  42  
YHJ  H13  H13  H  0  1  N  N  N  -20.225   3.913  13.741   3.102   2.198   0.728  H13  YHJ  43  
YHJ  H14  H14  H  0  1  N  N  N  -18.964   6.713  14.015   4.924   1.556   2.198  H14  YHJ  44  
YHJ  H15  H15  H  0  1  N  N  N  -19.822   8.809  14.983   7.363   1.345   2.468  H15  YHJ  45  
YHJ  H16  H16  H  0  1  N  N  N  -21.595   8.731  16.681   8.810   1.163   0.485  H16  YHJ  46  
YHJ  H17  H17  H  0  1  N  N  N  -22.436   6.579  17.510   7.820   1.193  -1.769  H17  YHJ  47  
YHJ  H18  H18  H  0  1  N  N  N  -21.791   0.598  15.091   2.435  -2.211   0.542  H18  YHJ  48  
YHJ  H19  H19  H  0  1  N  N  N  -21.211   1.330  16.626   1.970  -2.597  -1.142  H19  YHJ  49  
YHJ  H20  H20  H  0  1  N  N  N  -20.060   0.135  18.386   1.800  -4.789  -0.424  H20  YHJ  50  
YHJ  H21  H21  H  0  1  N  N  N  -21.162  -1.200  18.864   0.344  -5.383   0.422  H21  YHJ  51  
YHJ  H22  H22  H  0  1  N  N  N  -18.239  -2.584  16.647  -0.009  -2.648  -2.402  H22  YHJ  52  
YHJ  H23  H23  H  0  1  N  N  N  -19.693  -3.486  17.193  -1.641  -3.362  -2.229  H23  YHJ  53  
YHJ  H25  H25  H  0  1  N  N  N  -18.221  -0.648  15.737  -0.827  -0.781  -1.401  H25  YHJ  54  
YHJ  H26  H26  H  0  1  N  N  N  -17.128  -1.674  14.018  -3.022  -0.463  -0.251  H26  YHJ  55  
YHJ  H27  H27  H  0  1  N  N  N  -17.397   0.814  11.856  -3.306   2.961   0.601  H27  YHJ  56  
YHJ  H28  H28  H  0  1  N  N  N  -18.740   1.301   8.217  -6.346   1.658  -1.548  H28  YHJ  57  
YHJ  H29  H29  H  0  1  N  N  N  -18.902   2.231   9.746  -5.929   3.143  -2.453  H29  YHJ  58  
YHJ  H30  H30  H  0  1  N  N  N  -16.377   2.421   8.550  -4.166   1.483  -3.060  H30  YHJ  59  
YHJ  H31  H31  H  0  1  N  N  N  -16.261  -3.586  12.378  -2.850  -1.109   3.020  H31  YHJ  60  
YHJ  H32  H32  H  0  1  N  N  N  -17.953  -4.040  12.776  -4.165  -0.019   3.522  H32  YHJ  61  
YHJ  H33  H33  H  0  1  N  N  N  -17.199  -4.993  10.845  -4.999  -2.101   2.698  H33  YHJ  62  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
YHJ  C10  C05  DOUB  Y  N   1  
YHJ  C10  C09  SING  Y  N   2  
YHJ  C13  C17  SING  N  N   3  
YHJ  C13  C12  SING  N  N   4  
YHJ  C13  C14  SING  N  N   5  
YHJ  C15  C14  SING  N  N   6  
YHJ  C15  C16  SING  N  N   7  
YHJ  C17  C18  SING  N  N   8  
YHJ  C21  C22  SING  N  N   9  
YHJ  C21  N20  SING  N  N  10  
YHJ  C21  C29  SING  N  N  11  
YHJ  C22  C23  SING  N  N  12  
YHJ  C24  C23  SING  N  N  13  
YHJ  C24  C25  SING  N  N  14  
YHJ  O01  C02  DOUB  N  N  15  
YHJ  C02  O03  SING  N  N  16  
YHJ  C02  N11  SING  N  N  17  
YHJ  O03  C04  SING  N  N  18  
YHJ  C04  C05  SING  N  N  19  
YHJ  C05  C06  SING  Y  N  20  
YHJ  C06  C07  DOUB  Y  N  21  
YHJ  C07  C08  SING  Y  N  22  
YHJ  C08  C09  DOUB  Y  N  23  
YHJ  N11  C12  SING  N  N  24  
YHJ  N11  C18  SING  N  N  25  
YHJ  C18  C19  SING  N  N  26  
YHJ  C19  N20  SING  N  N  27  
YHJ  C19  O31  DOUB  N  N  28  
YHJ  C23  C27  SING  N  N  29  
YHJ  C25  N26  SING  N  N  30  
YHJ  N26  C27  SING  N  N  31  
YHJ  C27  O28  DOUB  N  N  32  
YHJ  C29  O30  SING  N  N  33  
YHJ  C10  H1   SING  N  N  34  
YHJ  C13  H2   SING  N  N  35  
YHJ  C15  H3   SING  N  N  36  
YHJ  C15  H4   SING  N  N  37  
YHJ  C17  H5   SING  N  N  38  
YHJ  C21  H7   SING  N  N  39  
YHJ  C22  H8   SING  N  N  40  
YHJ  C22  H9   SING  N  N  41  
YHJ  C24  H10  SING  N  N  42  
YHJ  C24  H11  SING  N  N  43  
YHJ  C04  H12  SING  N  N  44  
YHJ  C04  H13  SING  N  N  45  
YHJ  C06  H14  SING  N  N  46  
YHJ  C07  H15  SING  N  N  47  
YHJ  C08  H16  SING  N  N  48  
YHJ  C09  H17  SING  N  N  49  
YHJ  C12  H18  SING  N  N  50  
YHJ  C12  H19  SING  N  N  51  
YHJ  C14  H20  SING  N  N  52  
YHJ  C14  H21  SING  N  N  53  
YHJ  C16  H22  SING  N  N  54  
YHJ  C16  H23  SING  N  N  55  
YHJ  C18  H25  SING  N  N  56  
YHJ  N20  H26  SING  N  N  57  
YHJ  C23  H27  SING  N  N  58  
YHJ  C25  H28  SING  N  N  59  
YHJ  C25  H29  SING  N  N  60  
YHJ  N26  H30  SING  N  N  61  
YHJ  C29  H31  SING  N  N  62  
YHJ  C29  H32  SING  N  N  63  
YHJ  O30  H33  SING  N  N  64  
YHJ  C17  C16  SING  N  N  65  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
YHJ  SMILES            ACDLabs               12.01  "O=C1NCCC1CC(CO)NC(=O)C1C2CCCC2CN1C(=O)OCc1ccccc1"  
YHJ  InChI             InChI                 1.03   "InChI=1S/C23H31N3O5/c27-13-18(11-16-9-10-24-21(16)28)25-22(29)20-19-8-4-7-17(19)12-26(20)23(30)31-14-15-5-2-1-3-6-15/h1-3,5-6,16-20,27H,4,7-14H2,(H,24,28)(H,25,29)/t16-,17-,18-,19-,20-/m0/s1"  
YHJ  InChIKey          InChI                 1.03   BQHAUUUZCGWWEE-HVTWWXFQSA-N  
YHJ  SMILES_CANONICAL  CACTVS                3.385  "OC[C@H](C[C@@H]1CCNC1=O)NC(=O)[C@@H]2[C@H]3CCC[C@H]3CN2C(=O)OCc4ccccc4"  
YHJ  SMILES            CACTVS                3.385  "OC[CH](C[CH]1CCNC1=O)NC(=O)[CH]2[CH]3CCC[CH]3CN2C(=O)OCc4ccccc4"  
YHJ  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1ccc(cc1)COC(=O)N2C[C@@H]3CCCC3[C@H]2C(=O)N[C@@H](C[C@@H]4CCNC4=O)CO"  
YHJ  SMILES            "OpenEye OEToolkits"  2.0.7  "c1ccc(cc1)COC(=O)N2CC3CCCC3C2C(=O)NC(CC4CCNC4=O)CO"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
YHJ  "SYSTEMATIC NAME"  ACDLabs               12.01  "benzyl (1S,3aR,6aS)-1-({(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}carbamoyl)hexahydrocyclopenta[c]pyrrole-2(1H)-carboxylate"  
YHJ  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "(phenylmethyl) (3~{S},6~{a}~{R})-3-[[(2~{S})-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]carbamoyl]-3,3~{a},4,5,6,6~{a}-hexahydro-1~{H}-cyclopenta[c]pyrrole-2-carboxylate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
YHJ  "Create component"  2021-03-08  RCSB  
YHJ  "Initial release"   2021-03-17  RCSB  
##
