data_YLV
#

_chem_comp.id                                   YLV
_chem_comp.name                                 "(1R,2S)-1-hydroxy-2-((S)-4-methyl-2-((((perfluorophenyl)methoxy)carbonyl)amino)pentanamido)-3-((R)-2-oxo-2,3-dihydro-1H-pyrrol-3-yl)propane-1-sulfonic acid"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C21 H24 F5 N3 O8 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-03-12
_chem_comp.pdbx_modified_date                   2021-03-19
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       573.488
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    YLV
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  Y
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7M04
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
YLV  C01  C1   C  0  1  N  N  R   9.086  18.463  28.265   4.575   0.711   1.966  C01  YLV   1  
YLV  C03  C2   C  0  1  N  N  S   8.823  19.858  27.672   4.122  -0.467   1.101  C03  YLV   2  
YLV  C04  C3   C  0  1  N  N  N   7.790  19.809  26.524   5.329  -1.052   0.363  C04  YLV   3  
YLV  C05  C4   C  0  1  N  N  R   7.444  21.206  25.938   4.893  -2.286  -0.429  C05  YLV   4  
YLV  C06  C5   C  0  1  N  N  N   6.477  21.027  24.652   6.072  -2.891  -1.164  C06  YLV   5  
YLV  C08  C6   C  0  1  N  N  N   5.521  22.568  26.172   5.260  -4.407   0.300  C08  YLV   6  
YLV  C09  C7   C  0  1  N  N  N   6.795  21.954  26.860   4.450  -3.391   0.507  C09  YLV   7  
YLV  C12  C8   C  0  1  N  N  N  10.539  21.742  27.629   1.818  -0.050   0.428  C12  YLV   8  
YLV  C13  C9   C  0  1  N  N  S  11.919  22.184  27.144   0.798   0.426  -0.575  C13  YLV   9  
YLV  C14  C10  C  0  1  N  N  N  12.947  21.906  28.261   1.052   1.899  -0.901  C14  YLV  10  
YLV  C15  C11  C  0  1  N  N  N  14.396  22.285  27.803   0.098   2.348  -2.009  C15  YLV  11  
YLV  C16  C12  C  0  1  N  N  N  14.896  21.276  26.703   0.265   3.849  -2.249  C16  YLV  12  
YLV  C17  C13  C  0  1  N  N  N  15.346  22.334  29.002   0.418   1.587  -3.297  C17  YLV  13  
YLV  C19  C14  C  0  1  N  N  N  10.932  24.071  25.856  -1.608   0.143  -0.832  C19  YLV  14  
YLV  C21  C15  C  0  1  N  N  N  11.378  25.999  24.591  -3.940  -0.133  -1.257  C21  YLV  15  
YLV  C22  C16  C  0  1  Y  N  N  11.320  27.559  24.589  -5.236  -0.276  -0.501  C22  YLV  16  
YLV  C23  C17  C  0  1  Y  N  N  12.258  28.258  25.321  -5.970   0.849  -0.167  C23  YLV  17  
YLV  C25  C18  C  0  1  Y  N  N  12.238  29.660  25.341  -7.162   0.719   0.528  C25  YLV  18  
YLV  C27  C19  C  0  1  Y  N  N  11.269  30.351  24.620  -7.619  -0.539   0.888  C27  YLV  19  
YLV  C29  C20  C  0  1  Y  N  N  10.326  29.652  23.879  -6.885  -1.665   0.553  C29  YLV  20  
YLV  C31  C21  C  0  1  Y  N  N  10.348  28.253  23.859  -5.695  -1.533  -0.147  C31  YLV  21  
YLV  F24  F1   F  0  1  N  N  N  13.195  27.567  26.020  -5.523   2.075  -0.517  F24  YLV  22  
YLV  F26  F2   F  0  1  N  N  N  13.162  30.346  26.067  -7.877   1.817   0.855  F26  YLV  23  
YLV  F28  F3   F  0  1  N  N  N  11.246  31.717  24.638  -8.781  -0.667   1.566  F28  YLV  24  
YLV  F30  F4   F  0  1  N  N  N   9.379  30.334  23.166  -7.330  -2.891   0.903  F30  YLV  25  
YLV  F32  F5   F  0  1  N  N  N   9.422  27.583  23.127  -4.979  -2.630  -0.475  F32  YLV  26  
YLV  N07  N1   N  0  1  N  N  N   5.374  21.818  24.797   6.210  -4.137  -0.668  N07  YLV  27  
YLV  N11  N2   N  0  1  N  N  N  10.115  20.371  27.255   3.131  -0.005   0.126  N11  YLV  28  
YLV  N18  N3   N  0  1  N  N  N  11.898  23.593  26.831  -0.546   0.275  -0.013  N18  YLV  29  
YLV  O02  O1   O  0  1  N  N  N   9.937  18.634  29.374   3.473   1.183   2.743  O02  YLV  30  
YLV  O10  O2   O  0  1  N  N  N   6.692  20.329  23.710   6.751  -2.365  -2.021  O10  YLV  31  
YLV  O20  O3   O  0  1  N  N  N  10.714  25.469  25.736  -2.844   0.005  -0.315  O20  YLV  32  
YLV  O33  O4   O  0  1  N  N  N  10.344  23.299  25.163  -1.451   0.149  -2.036  O33  YLV  33  
YLV  O34  O5   O  0  1  N  N  N   9.839  22.487  28.259   1.457  -0.473   1.506  O34  YLV  34  
YLV  S1   S1   S  0  1  N  Y  N   9.539  17.823  27.537   5.179   2.048   0.898  S1   YLV  35  
YLV  H2   H2   H  0  1  N  N  N   8.117  18.098  28.636   5.376   0.387   2.630  H2   YLV  36  
YLV  H3   H3   H  0  1  N  N  N   8.418  20.499  28.469   3.678  -1.234   1.735  H3   YLV  37  
YLV  H4   H4   H  0  1  N  N  N   6.865  19.354  26.908   5.733  -0.305  -0.320  H4   YLV  38  
YLV  H5   H5   H  0  1  N  N  N   8.198  19.184  25.716   6.094  -1.335   1.086  H5   YLV  39  
YLV  H6   H6   H  0  1  N  N  N   8.373  21.690  25.601   4.094  -2.030  -1.126  H6   YLV  40  
YLV  H7   H7   H  0  1  N  N  N   4.880  23.344  26.563   5.191  -5.348   0.826  H7   YLV  41  
YLV  H8   H8   H  0  1  N  N  N   7.098  22.103  27.886   3.629  -3.352   1.209  H8   YLV  42  
YLV  H9   H9   H  0  1  N  N  N  12.193  21.599  26.253   0.880  -0.168  -1.485  H9   YLV  43  
YLV  H10  H10  H  0  1  N  N  N  12.684  22.501  29.148   0.884   2.503  -0.010  H10  YLV  44  
YLV  H11  H11  H  0  1  N  N  N  12.919  20.836  28.516   2.082   2.024  -1.236  H11  YLV  45  
YLV  H12  H12  H  0  1  N  N  N  14.357  23.287  27.350  -0.930   2.140  -1.710  H12  YLV  46  
YLV  H13  H13  H  0  1  N  N  N  15.914  21.551  26.388   1.292   4.057  -2.549  H13  YLV  47  
YLV  H14  H14  H  0  1  N  N  N  14.903  20.257  27.116  -0.415   4.169  -3.039  H14  YLV  48  
YLV  H15  H15  H  0  1  N  N  N  14.221  21.315  25.835   0.037   4.392  -1.332  H15  YLV  49  
YLV  H16  H16  H  0  1  N  N  N  14.962  23.048  29.746   0.299   0.517  -3.126  H16  YLV  50  
YLV  H17  H17  H  0  1  N  N  N  15.415  21.334  29.456  -0.262   1.906  -4.087  H17  YLV  51  
YLV  H18  H18  H  0  1  N  N  N  16.343  22.655  28.667   1.445   1.794  -3.597  H18  YLV  52  
YLV  H19  H19  H  0  1  N  N  N  10.889  25.619  23.682  -3.780  -1.016  -1.874  H19  YLV  53  
YLV  H20  H20  H  0  1  N  N  N  12.430  25.677  24.603  -3.986   0.751  -1.893  H20  YLV  54  
YLV  H21  H21  H  0  1  N  N  N   4.616  21.904  24.151   6.891  -4.765  -0.954  H21  YLV  55  
YLV  H22  H22  H  0  1  N  N  N  10.725  19.795  26.711   3.420   0.334  -0.736  H22  YLV  56  
YLV  H23  H23  H  0  1  N  N  N  12.533  24.225  27.275  -0.672   0.270   0.949  H23  YLV  57  
YLV  H24  H24  H  0  1  N  N  N  10.121  17.788  29.766   2.722   1.488   2.216  H24  YLV  58  
YLV  O1   O6   O  0  1  N  Y  N       ?       ?       ?   6.390   1.667   0.259  O1   YLV  59  
YLV  O2   O7   O  0  1  N  Y  N       ?       ?       ?   4.108   2.618   0.159  O2   YLV  60  
YLV  O3   O8   O  0  1  N  Y  N       ?       ?       ?   5.595   3.147   1.865  O3   YLV  61  
YLV  H1   H1   H  0  1  N  Y  N       ?       ?       ?   5.944   3.939   1.434  H1   YLV  62  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
YLV  F32  C31  SING  N  N   1  
YLV  F30  C29  SING  N  N   2  
YLV  O10  C06  DOUB  N  N   3  
YLV  C31  C29  DOUB  Y  N   4  
YLV  C31  C22  SING  Y  N   5  
YLV  C29  C27  SING  Y  N   6  
YLV  C22  C21  SING  N  N   7  
YLV  C22  C23  DOUB  Y  N   8  
YLV  C21  O20  SING  N  N   9  
YLV  C27  F28  SING  N  N  10  
YLV  C27  C25  DOUB  Y  N  11  
YLV  C06  N07  SING  N  N  12  
YLV  C06  C05  SING  N  N  13  
YLV  N07  C08  SING  N  N  14  
YLV  O33  C19  DOUB  N  N  15  
YLV  C23  C25  SING  Y  N  16  
YLV  C23  F24  SING  N  N  17  
YLV  C25  F26  SING  N  N  18  
YLV  O20  C19  SING  N  N  19  
YLV  C19  N18  SING  N  N  20  
YLV  C05  C04  SING  N  N  21  
YLV  C05  C09  SING  N  N  22  
YLV  C08  C09  DOUB  N  N  23  
YLV  C04  C03  SING  N  N  24  
YLV  C16  C15  SING  N  N  25  
YLV  N18  C13  SING  N  N  26  
YLV  C13  C12  SING  N  N  27  
YLV  C13  C14  SING  N  N  28  
YLV  N11  C12  SING  N  N  29  
YLV  N11  C03  SING  N  N  30  
YLV  C12  O34  DOUB  N  N  31  
YLV  C03  C01  SING  N  N  32  
YLV  C15  C14  SING  N  N  33  
YLV  C15  C17  SING  N  N  34  
YLV  C01  O02  SING  N  N  35  
YLV  C01  S1   SING  N  N  36  
YLV  C01  H2   SING  N  N  37  
YLV  C03  H3   SING  N  N  38  
YLV  C04  H4   SING  N  N  39  
YLV  C04  H5   SING  N  N  40  
YLV  C05  H6   SING  N  N  41  
YLV  C08  H7   SING  N  N  42  
YLV  C09  H8   SING  N  N  43  
YLV  C13  H9   SING  N  N  44  
YLV  C14  H10  SING  N  N  45  
YLV  C14  H11  SING  N  N  46  
YLV  C15  H12  SING  N  N  47  
YLV  C16  H13  SING  N  N  48  
YLV  C16  H14  SING  N  N  49  
YLV  C16  H15  SING  N  N  50  
YLV  C17  H16  SING  N  N  51  
YLV  C17  H17  SING  N  N  52  
YLV  C17  H18  SING  N  N  53  
YLV  C21  H19  SING  N  N  54  
YLV  C21  H20  SING  N  N  55  
YLV  N07  H21  SING  N  N  56  
YLV  N11  H22  SING  N  N  57  
YLV  N18  H23  SING  N  N  58  
YLV  O02  H24  SING  N  N  59  
YLV  S1   O1   DOUB  N  N  60  
YLV  S1   O2   DOUB  N  N  61  
YLV  S1   O3   SING  N  N  62  
YLV  O3   H1   SING  N  N  63  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
YLV  SMILES            ACDLabs               12.01  "O=C1NC=CC1CC(NC(=O)C(CC(C)C)NC(=O)OCc1c(F)c(F)c(F)c(F)c1F)C(O)S(=O)(=O)O"  
YLV  InChI             InChI                 1.03   "InChI=1S/C21H24F5N3O8S/c1-8(2)5-11(29-21(33)37-7-10-13(22)15(24)17(26)16(25)14(10)23)19(31)28-12(20(32)38(34,35)36)6-9-3-4-27-18(9)30/h3-4,8-9,11-12,20,32H,5-7H2,1-2H3,(H,27,30)(H,28,31)(H,29,33)(H,34,35,36)/t9-,11-,12-,20+/m0/s1"  
YLV  InChIKey          InChI                 1.03   VNVWDEQECYLCMA-AYUSFXAWSA-N  
YLV  SMILES_CANONICAL  CACTVS                3.385  "CC(C)C[C@H](NC(=O)OCc1c(F)c(F)c(F)c(F)c1F)C(=O)N[C@@H](C[C@@H]2C=CNC2=O)[C@H](O)[S](O)(=O)=O"  
YLV  SMILES            CACTVS                3.385  "CC(C)C[CH](NC(=O)OCc1c(F)c(F)c(F)c(F)c1F)C(=O)N[CH](C[CH]2C=CNC2=O)[CH](O)[S](O)(=O)=O"  
YLV  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CC(C)C[C@@H](C(=O)N[C@@H](C[C@@H]1C=CNC1=O)C(O)S(=O)(=O)O)NC(=O)OCc2c(c(c(c(c2F)F)F)F)F"  
YLV  SMILES            "OpenEye OEToolkits"  2.0.7  "CC(C)CC(C(=O)NC(CC1C=CNC1=O)C(O)S(=O)(=O)O)NC(=O)OCc2c(c(c(c(c2F)F)F)F)F"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
YLV  "SYSTEMATIC NAME"  ACDLabs               12.01  "(1R,2S)-1-hydroxy-3-[(3R)-2-oxo-2,3-dihydro-1H-pyrrol-3-yl]-2-[(N-{[(pentafluorophenyl)methoxy]carbonyl}-L-leucyl)amino]propane-1-sulfonic acid"  
YLV  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "(2~{S})-2-[[(2~{S})-4-methyl-2-[[2,3,4,5,6-pentakis(fluoranyl)phenyl]methoxycarbonylamino]pentanoyl]amino]-1-oxidanyl-3-[(3~{R})-2-oxidanylidene-1,3-dihydropyrrol-3-yl]propane-1-sulfonic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
YLV  "Create component"  2021-03-12  RCSB  
YLV  "Initial release"   2021-03-24  RCSB  
##
