data_YMG
#

_chem_comp.id                                   YMG
_chem_comp.name                                 "(1S,2S)-2-((S)-2-((((4,4-dimethylcyclohexyl)oxy)carbonyl)amino)-4-methylpentanamido)-1-hydroxy-3-((S)-2-oxopyrrolidin-3-yl)propane-1-sulfonic acid"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C22 H39 N3 O8 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-03-12
_chem_comp.pdbx_modified_date                   2021-03-19
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       505.625
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    YMG
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  Y
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7LZX
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
YMG  C11  C1   C  0  1  N  N  S   9.097  19.892  27.414  -3.038  -0.163   0.219  C11  YMG   1  
YMG  C12  C2   C  0  1  N  N  N   7.999  19.884  26.319  -3.883   0.860  -0.544  C12  YMG   2  
YMG  C13  C3   C  0  1  N  N  S   7.742  21.175  25.695  -3.113   2.178  -0.652  C13  YMG   3  
YMG  C14  C4   C  0  1  N  N  N   6.694  21.021  24.501  -3.954   3.226  -1.347  C14  YMG   4  
YMG  C16  C5   C  0  1  N  N  N   6.028  22.708  26.032  -3.004   4.285   0.488  C16  YMG   5  
YMG  C02  C6   C  0  1  N  N  N  11.283  24.037  25.681   2.932  -0.187   0.036  C02  YMG   6  
YMG  C04  C7   C  0  1  N  N  S  12.270  22.069  26.914   0.652  -0.822  -0.544  C04  YMG   7  
YMG  C05  C8   C  0  1  N  N  N  13.382  21.810  27.921   0.749  -2.174  -1.254  C05  YMG   8  
YMG  C06  C9   C  0  1  N  N  N  14.731  22.282  27.398  -0.333  -2.262  -2.332  C06  YMG   9  
YMG  C07  C10  C  0  1  N  N  N  15.119  21.518  26.139  -0.063  -1.214  -3.413  C07  YMG  10  
YMG  C08  C11  C  0  1  N  N  N  15.807  22.162  28.472  -0.315  -3.658  -2.959  C08  YMG  11  
YMG  C09  C12  C  0  1  N  N  N  10.955  21.576  27.492  -0.668  -0.727   0.177  C09  YMG  12  
YMG  C17  C13  C  0  1  N  N  N   7.046  22.064  26.696  -2.855   2.770   0.753  C17  YMG  13  
YMG  C19  C14  C  0  1  N  N  S   9.340  18.526  28.051  -3.812  -1.478   0.335  C19  YMG  14  
YMG  C23  C15  C  0  1  N  N  N  10.287  25.925  24.698   5.215   0.399   0.411  C23  YMG  15  
YMG  C24  C16  C  0  1  N  N  N   8.882  26.064  25.279   5.980   1.023   1.580  C24  YMG  16  
YMG  C25  C17  C  0  1  N  N  N   7.946  26.801  24.329   7.293   1.618   1.069  C25  YMG  17  
YMG  C26  C18  C  0  1  N  N  N   8.505  28.154  23.899   8.142   0.514   0.436  C26  YMG  18  
YMG  C27  C19  C  0  1  N  N  N   7.593  28.721  22.822   9.456   1.109  -0.074  C27  YMG  19  
YMG  C28  C20  C  0  1  N  N  N   8.494  29.123  25.082   8.442  -0.562   1.482  C28  YMG  20  
YMG  C29  C21  C  0  1  N  N  N   9.918  28.042  23.338   7.377  -0.111  -0.732  C29  YMG  21  
YMG  C30  C22  C  0  1  N  N  N  10.855  27.276  24.266   6.063  -0.706  -0.222  C30  YMG  22  
YMG  N03  N1   N  0  1  N  N  N  12.187  23.487  26.660   1.746  -0.698   0.422  N03  YMG  23  
YMG  N10  N2   N  0  1  N  N  N  10.350  20.411  26.899  -1.784  -0.396  -0.502  N10  YMG  24  
YMG  N15  N3   N  0  1  N  N  N   5.713  21.909  24.709  -3.878   4.393  -0.685  N15  YMG  25  
YMG  O01  O1   O  0  1  N  N  N  10.695  23.348  24.925   3.066   0.254  -1.088  O01  YMG  26  
YMG  O18  O2   O  0  1  N  N  N   6.767  20.284  23.597  -4.601   3.040  -2.356  O18  YMG  27  
YMG  O20  O3   O  0  1  N  N  N   8.147  17.970  28.536  -2.978  -2.469   0.940  O20  YMG  28  
YMG  O21  O4   O  0  1  N  N  N  10.427  22.145  28.383  -0.726  -0.948   1.368  O21  YMG  29  
YMG  O22  O5   O  0  1  N  N  N  11.136  25.420  25.670   3.968  -0.166   0.895  O22  YMG  30  
YMG  H1   H1   H  0  1  N  N  N   8.749  20.565  28.211  -2.819   0.219   1.216  H1   YMG  31  
YMG  H2   H2   H  0  1  N  N  N   7.062  19.534  26.778  -4.097   0.481  -1.543  H2   YMG  32  
YMG  H3   H3   H  0  1  N  N  N   8.307  19.180  25.532  -4.819   1.028  -0.011  H3   YMG  33  
YMG  H4   H4   H  0  1  N  N  N   8.666  21.643  25.324  -2.173   2.027  -1.181  H4   YMG  34  
YMG  H5   H5   H  0  1  N  N  N   6.338  23.733  25.782  -3.463   4.774   1.347  H5   YMG  35  
YMG  H6   H6   H  0  1  N  N  N   5.132  22.741  26.669  -2.030   4.728   0.278  H6   YMG  36  
YMG  H7   H7   H  0  1  N  N  N  12.487  21.524  25.983   0.723  -0.020  -1.278  H7   YMG  37  
YMG  H8   H8   H  0  1  N  N  N  13.152  22.347  28.853   1.731  -2.271  -1.717  H8   YMG  38  
YMG  H9   H9   H  0  1  N  N  N  13.436  20.730  28.124   0.607  -2.976  -0.530  H9   YMG  39  
YMG  H10  H10  H  0  1  N  N  N  14.637  23.345  27.132  -1.309  -2.078  -1.883  H10  YMG  40  
YMG  H11  H11  H  0  1  N  N  N  16.095  21.875  25.779   0.880  -1.440  -3.911  H11  YMG  41  
YMG  H12  H12  H  0  1  N  N  N  15.183  20.444  26.367  -0.872  -1.229  -4.144  H12  YMG  42  
YMG  H13  H13  H  0  1  N  N  N  14.359  21.683  25.361  -0.005  -0.227  -2.956  H13  YMG  43  
YMG  H14  H14  H  0  1  N  N  N  15.498  22.723  29.366  -0.508  -4.405  -2.189  H14  YMG  44  
YMG  H15  H15  H  0  1  N  N  N  15.947  21.103  28.734  -1.087  -3.721  -3.727  H15  YMG  45  
YMG  H16  H16  H  0  1  N  N  N  16.753  22.573  28.090   0.660  -3.842  -3.408  H16  YMG  46  
YMG  H17  H17  H  0  1  N  N  N   6.636  21.458  27.517  -3.603   2.424   1.466  H17  YMG  47  
YMG  H18  H18  H  0  1  N  N  N   7.755  22.800  27.103  -1.849   2.531   1.098  H18  YMG  48  
YMG  H19  H19  H  0  1  N  N  N  10.017  18.688  28.902  -4.111  -1.812  -0.658  H19  YMG  49  
YMG  S1   S1   S  0  1  N  Y  N   9.728  17.873  27.297  -5.288  -1.223   1.358  S1   YMG  50  
YMG  H21  H21  H  0  1  N  N  N  10.248  25.258  23.824   5.001   1.165  -0.334  H21  YMG  51  
YMG  H22  H22  H  0  1  N  N  N   8.942  26.623  26.225   5.375   1.810   2.031  H22  YMG  52  
YMG  H23  H23  H  0  1  N  N  N   8.476  25.060  25.471   6.193   0.257   2.325  H23  YMG  53  
YMG  H24  H24  H  0  1  N  N  N   6.983  26.961  24.835   7.080   2.385   0.324  H24  YMG  54  
YMG  H25  H25  H  0  1  N  N  N   7.791  26.181  23.433   7.839   2.063   1.902  H25  YMG  55  
YMG  H26  H26  H  0  1  N  N  N   6.569  28.807  23.215  10.001   1.554   0.759  H26  YMG  56  
YMG  H27  H27  H  0  1  N  N  N   7.955  29.716  22.522  10.060   0.322  -0.525  H27  YMG  57  
YMG  H28  H28  H  0  1  N  N  N   7.596  28.051  21.950   9.242   1.875  -0.819  H28  YMG  58  
YMG  H29  H29  H  0  1  N  N  N   9.147  28.737  25.879   7.506  -0.986   1.846  H29  YMG  59  
YMG  H30  H30  H  0  1  N  N  N   8.859  30.107  24.753   9.046  -1.349   1.031  H30  YMG  60  
YMG  H31  H31  H  0  1  N  N  N   7.468  29.222  25.465   8.987  -0.117   2.315  H31  YMG  61  
YMG  H32  H32  H  0  1  N  N  N   9.873  27.519  22.371   7.163   0.656  -1.477  H32  YMG  62  
YMG  H33  H33  H  0  1  N  N  N  10.320  29.055  23.189   7.982  -0.897  -1.183  H33  YMG  63  
YMG  H34  H34  H  0  1  N  N  N  11.807  27.106  23.742   6.277  -1.472   0.523  H34  YMG  64  
YMG  H35  H35  H  0  1  N  N  N  11.035  27.885  25.164   5.518  -1.151  -1.055  H35  YMG  65  
YMG  H36  H36  H  0  1  N  N  N  12.775  24.107  27.179   1.617  -0.984   1.340  H36  YMG  66  
YMG  H37  H37  H  0  1  N  N  N  10.796  19.957  26.128  -1.758  -0.311  -1.468  H37  YMG  67  
YMG  H38  H38  H  0  1  N  N  N   4.914  22.043  24.123  -4.342   5.203  -0.949  H38  YMG  68  
YMG  H39  H39  H  0  1  N  N  N   8.328  17.123  28.926  -2.168  -2.657   0.446  H39  YMG  69  
YMG  O1   O6   O  0  1  N  Y  N       ?       ?       ?  -6.038  -2.426   1.459  O1   YMG  70  
YMG  O2   O7   O  0  1  N  Y  N       ?       ?       ?  -4.969  -0.459   2.513  O2   YMG  71  
YMG  O3   O8   O  0  1  N  Y  N       ?       ?       ?  -6.169  -0.300   0.529  O3   YMG  72  
YMG  H20  H20  H  0  1  N  Y  N       ?       ?       ?  -7.008  -0.071   0.953  H20  YMG  73  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
YMG  C27  C26  SING  N  N   1  
YMG  C29  C26  SING  N  N   2  
YMG  C29  C30  SING  N  N   3  
YMG  O18  C14  DOUB  N  N   4  
YMG  C26  C25  SING  N  N   5  
YMG  C26  C28  SING  N  N   6  
YMG  C30  C23  SING  N  N   7  
YMG  C25  C24  SING  N  N   8  
YMG  C14  N15  SING  N  N   9  
YMG  C14  C13  SING  N  N  10  
YMG  C23  C24  SING  N  N  11  
YMG  C23  O22  SING  N  N  12  
YMG  N15  C16  SING  N  N  13  
YMG  O01  C02  DOUB  N  N  14  
YMG  O22  C02  SING  N  N  15  
YMG  C02  N03  SING  N  N  16  
YMG  C13  C12  SING  N  N  17  
YMG  C13  C17  SING  N  N  18  
YMG  C16  C17  SING  N  N  19  
YMG  C07  C06  SING  N  N  20  
YMG  C12  C11  SING  N  N  21  
YMG  N03  C04  SING  N  N  22  
YMG  N10  C11  SING  N  N  23  
YMG  N10  C09  SING  N  N  24  
YMG  C04  C09  SING  N  N  25  
YMG  C04  C05  SING  N  N  26  
YMG  C06  C05  SING  N  N  27  
YMG  C06  C08  SING  N  N  28  
YMG  C11  C19  SING  N  N  29  
YMG  C09  O21  DOUB  N  N  30  
YMG  C19  O20  SING  N  N  31  
YMG  C11  H1   SING  N  N  32  
YMG  C12  H2   SING  N  N  33  
YMG  C12  H3   SING  N  N  34  
YMG  C13  H4   SING  N  N  35  
YMG  C16  H5   SING  N  N  36  
YMG  C16  H6   SING  N  N  37  
YMG  C04  H7   SING  N  N  38  
YMG  C05  H8   SING  N  N  39  
YMG  C05  H9   SING  N  N  40  
YMG  C06  H10  SING  N  N  41  
YMG  C07  H11  SING  N  N  42  
YMG  C07  H12  SING  N  N  43  
YMG  C07  H13  SING  N  N  44  
YMG  C08  H14  SING  N  N  45  
YMG  C08  H15  SING  N  N  46  
YMG  C08  H16  SING  N  N  47  
YMG  C17  H17  SING  N  N  48  
YMG  C17  H18  SING  N  N  49  
YMG  C19  H19  SING  N  N  50  
YMG  C19  S1   SING  N  N  51  
YMG  C23  H21  SING  N  N  52  
YMG  C24  H22  SING  N  N  53  
YMG  C24  H23  SING  N  N  54  
YMG  C25  H24  SING  N  N  55  
YMG  C25  H25  SING  N  N  56  
YMG  C27  H26  SING  N  N  57  
YMG  C27  H27  SING  N  N  58  
YMG  C27  H28  SING  N  N  59  
YMG  C28  H29  SING  N  N  60  
YMG  C28  H30  SING  N  N  61  
YMG  C28  H31  SING  N  N  62  
YMG  C29  H32  SING  N  N  63  
YMG  C29  H33  SING  N  N  64  
YMG  C30  H34  SING  N  N  65  
YMG  C30  H35  SING  N  N  66  
YMG  N03  H36  SING  N  N  67  
YMG  N10  H37  SING  N  N  68  
YMG  N15  H38  SING  N  N  69  
YMG  O20  H39  SING  N  N  70  
YMG  S1   O1   DOUB  N  N  71  
YMG  S1   O2   DOUB  N  N  72  
YMG  S1   O3   SING  N  N  73  
YMG  O3   H20  SING  N  N  74  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
YMG  SMILES            ACDLabs               12.01  "CC(C)CC(NC(=O)OC1CCC(C)(C)CC1)C(=O)NC(CC1CCNC1=O)C(O)S(=O)(=O)O"  
YMG  InChI             InChI                 1.03   "InChI=1S/C22H39N3O8S/c1-13(2)11-16(25-21(29)33-15-5-8-22(3,4)9-6-15)19(27)24-17(20(28)34(30,31)32)12-14-7-10-23-18(14)26/h13-17,20,28H,5-12H2,1-4H3,(H,23,26)(H,24,27)(H,25,29)(H,30,31,32)/t14-,16-,17-,20-/m0/s1"  
YMG  InChIKey          InChI                 1.03   LGCFVMZACNBZBJ-VERUCKTNSA-N  
YMG  SMILES_CANONICAL  CACTVS                3.385  "CC(C)C[C@H](NC(=O)OC1CCC(C)(C)CC1)C(=O)N[C@@H](C[C@@H]2CCNC2=O)[C@@H](O)[S](O)(=O)=O"  
YMG  SMILES            CACTVS                3.385  "CC(C)C[CH](NC(=O)OC1CCC(C)(C)CC1)C(=O)N[CH](C[CH]2CCNC2=O)[CH](O)[S](O)(=O)=O"  
YMG  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CC(C)C[C@@H](C(=O)N[C@@H](C[C@@H]1CCNC1=O)C(O)S(=O)(=O)O)NC(=O)OC2CCC(CC2)(C)C"  
YMG  SMILES            "OpenEye OEToolkits"  2.0.7  "CC(C)CC(C(=O)NC(CC1CCNC1=O)C(O)S(=O)(=O)O)NC(=O)OC2CCC(CC2)(C)C"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
YMG  "SYSTEMATIC NAME"  ACDLabs               12.01  "(1S,2S)-2-[(N-{[(4,4-dimethylcyclohexyl)oxy]carbonyl}-L-leucyl)amino]-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid"  
YMG  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "(2~{S})-2-[[(2~{S})-2-[(4,4-dimethylcyclohexyl)oxycarbonylamino]-4-methyl-pentanoyl]amino]-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propane-1-sulfonic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
YMG  "Create component"  2021-03-12  RCSB  
YMG  "Initial release"   2021-03-24  RCSB  
##
