data_YTF
# 
_chem_comp.id                                    YTF 
_chem_comp.name                                  "ethyl (4~{S})-4,7-bis(azanyl)-7-oxidanylidene-heptanoate" 
_chem_comp.type                                  "L-peptide COOH carboxy terminus" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C9 H18 N2 O3" 
_chem_comp.mon_nstd_parent_comp_id               GLN 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-02-21 
_chem_comp.pdbx_modified_date                    2023-02-24 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        202.251 
_chem_comp.one_letter_code                       Q 
_chem_comp.three_letter_code                     YTF 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        2B0F 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YTF N    N1  N 0 1 N N N 302.708 -0.340 9.491  -1.008 1.723  -0.833 N    YTF 1  
YTF CA   C1  C 0 1 N N S 302.680 0.936  10.164 -0.979 0.626  0.143  CA   YTF 2  
YTF CB   C2  C 0 1 N N N 303.479 1.977  9.371  -2.220 -0.251 -0.038 CB   YTF 3  
YTF CG   C3  C 0 1 N N N 304.994 1.741  9.453  -3.471 0.561  0.303  CG   YTF 4  
YTF CD   C4  C 0 1 N N N 305.815 2.730  8.638  -4.694 -0.303 0.125  CD   YTF 5  
YTF OE1  O1  O 0 1 N N N 305.313 3.353  7.708  -4.575 -1.454 -0.239 OE1  YTF 6  
YTF NE2  N2  N 0 1 N N N 307.098 2.865  8.975  -5.918 0.204  0.370  NE2  YTF 7  
YTF CX5  C5  C 0 1 N N N 301.248 1.416  10.547 0.278  -0.219 -0.077 CX5  YTF 8  
YTF CX6  C6  C 0 1 N N N 301.037 1.020  12.010 1.518  0.625  0.226  CX6  YTF 9  
YTF CX7  C7  C 0 1 N N N 299.841 1.675  12.657 2.757  -0.207 0.009  CX7  YTF 10 
YTF OX8  O2  O 0 1 N N N 299.133 2.444  12.011 2.657  -1.356 -0.349 OX8  YTF 11 
YTF OX9  O3  O 0 1 N N N 299.622 1.398  13.861 3.970  0.330  0.216  OX9  YTF 12 
YTF CJ1  C8  C 0 1 N N N 298.460 1.980  14.686 5.118  -0.530 -0.012 CJ1  YTF 13 
YTF CJ2  C9  C 0 1 N N N 298.283 1.600  16.145 6.403  0.250  0.272  CJ2  YTF 14 
YTF H9   H1  H 0 1 N N N 302.183 -1.008 10.019 -0.232 2.353  -0.693 H9   YTF 15 
YTF H    H2  H 0 1 N N N 302.306 -0.245 8.580  -1.018 1.367  -1.778 H    YTF 16 
YTF HA   H4  H 0 1 N N N 303.215 0.807  11.117 -0.968 1.037  1.152  HA   YTF 17 
YTF HB2  H5  H 0 1 N N N 303.255 2.976  9.774  -2.277 -0.590 -1.072 HB2  YTF 18 
YTF HB3  H6  H 0 1 N N N 303.171 1.930  8.316  -2.155 -1.114 0.625  HB3  YTF 19 
YTF HG2  H7  H 0 1 N N N 305.207 0.727  9.085  -3.414 0.900  1.337  HG2  YTF 20 
YTF HG3  H8  H 0 1 N N N 305.301 1.821  10.506 -3.536 1.423  -0.360 HG3  YTF 21 
YTF HE22 H9  H 0 0 N N N 307.686 3.491  8.463  -6.013 1.125  0.660  HE22 YTF 22 
YTF HE21 H10 H 0 0 N N N 307.472 2.340  9.740  -6.705 -0.351 0.255  HE21 YTF 23 
YTF H11  H11 H 0 1 N N N 301.169 2.507  10.433 0.256  -1.083 0.587  H11  YTF 24 
YTF H1   H12 H 0 1 N N N 300.499 0.926  9.908  0.312  -0.557 -1.112 H1   YTF 25 
YTF H2   H13 H 0 1 N N N 300.902 -0.071 12.057 1.541  1.489  -0.438 H2   YTF 26 
YTF H3   H14 H 0 1 N N N 301.936 1.303  12.578 1.484  0.963  1.261  H3   YTF 27 
YTF H4   H15 H 0 1 N N N 298.570 3.074  14.657 5.062  -1.393 0.651  H4   YTF 28 
YTF H5   H16 H 0 1 N N N 297.532 1.691  14.171 5.119  -0.867 -1.048 H5   YTF 29 
YTF H7   H17 H 0 1 N N N 297.403 2.117  16.555 6.402  0.588  1.309  H7   YTF 30 
YTF H8   H18 H 0 1 N N N 298.140 0.512  16.226 7.265  -0.395 0.101  H8   YTF 31 
YTF H6   H19 H 0 1 N N N 299.178 1.895  16.712 6.458  1.113  -0.391 H6   YTF 32 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YTF OE1 CD   DOUB N N 1  
YTF CD  NE2  SING N N 2  
YTF CD  CG   SING N N 3  
YTF CB  CG   SING N N 4  
YTF CB  CA   SING N N 5  
YTF N   CA   SING N N 6  
YTF CA  CX5  SING N N 7  
YTF CX5 CX6  SING N N 8  
YTF CX6 CX7  SING N N 9  
YTF OX8 CX7  DOUB N N 10 
YTF CX7 OX9  SING N N 11 
YTF OX9 CJ1  SING N N 12 
YTF CJ1 CJ2  SING N N 13 
YTF N   H9   SING N N 14 
YTF N   H    SING N N 15 
YTF CA  HA   SING N N 16 
YTF CB  HB2  SING N N 17 
YTF CB  HB3  SING N N 18 
YTF CG  HG2  SING N N 19 
YTF CG  HG3  SING N N 20 
YTF NE2 HE22 SING N N 21 
YTF NE2 HE21 SING N N 22 
YTF CX5 H11  SING N N 23 
YTF CX5 H1   SING N N 24 
YTF CX6 H2   SING N N 25 
YTF CX6 H3   SING N N 26 
YTF CJ1 H4   SING N N 27 
YTF CJ1 H5   SING N N 28 
YTF CJ2 H7   SING N N 29 
YTF CJ2 H8   SING N N 30 
YTF CJ2 H6   SING N N 31 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YTF InChI            InChI                1.06  "InChI=1S/C9H18N2O3/c1-2-14-9(13)6-4-7(10)3-5-8(11)12/h7H,2-6,10H2,1H3,(H2,11,12)/t7-/m0/s1" 
YTF InChIKey         InChI                1.06  ZEVHIIRETBYBHR-ZETCQYMHSA-N                                                                  
YTF SMILES_CANONICAL CACTVS               3.385 "CCOC(=O)CC[C@@H](N)CCC(N)=O"                                                                
YTF SMILES           CACTVS               3.385 "CCOC(=O)CC[CH](N)CCC(N)=O"                                                                  
YTF SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCOC(=O)CC[C@H](CCC(=O)N)N"                                                                 
YTF SMILES           "OpenEye OEToolkits" 2.0.7 "CCOC(=O)CCC(CCC(=O)N)N"                                                                     
# 
_pdbx_chem_comp_identifier.comp_id           YTF 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "ethyl (4~{S})-4,7-bis(azanyl)-7-oxidanylidene-heptanoate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YTF "Create component" 2023-02-21 RCSB 
YTF "Initial release"  2023-03-01 RCSB 
# 
