data_YX7
# 
_chem_comp.id                                    YX7 
_chem_comp.name                                  "[(1S)-3-amino-1-(hexanoylamino)-3-oxopropyl]boronic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C9 H19 B N2 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2021-04-05 
_chem_comp.pdbx_modified_date                    2022-09-23 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        230.069 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YX7 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7MDC 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YX7 C01 C1  C 0 1 N N N 1.546 33.962 62.613 7.022  0.266  0.092  C01 YX7 1  
YX7 C02 C2  C 0 1 N N N 1.355 33.025 61.429 5.663  -0.429 -0.012 C02 YX7 2  
YX7 C03 C3  C 0 1 N N N 1.765 33.656 60.098 4.551  0.621  0.001  C03 YX7 3  
YX7 C04 C4  C 0 1 N N N 1.419 32.747 58.916 3.192  -0.074 -0.103 C04 YX7 4  
YX7 C05 C5  C 0 1 N N N 2.381 32.935 57.754 2.079  0.976  -0.091 C05 YX7 5  
YX7 C06 C6  C 0 1 N N N 1.866 32.246 56.497 0.741  0.291  -0.193 C06 YX7 6  
YX7 N07 N1  N 0 1 N N N 2.700 31.308 55.774 -0.391 1.022  -0.201 N07 YX7 7  
YX7 C08 C7  C 0 1 N N S 2.220 30.666 54.567 -1.685 0.367  -0.412 C08 YX7 8  
YX7 C09 C8  C 0 1 N N N 2.783 29.251 54.514 -2.795 1.216  0.211  C09 YX7 9  
YX7 C10 C9  C 0 1 N N N 2.468 28.378 55.726 -4.134 0.605  -0.109 C10 YX7 10 
YX7 N11 N2  N 0 1 N N N 3.519 27.988 56.643 -5.265 1.194  0.327  N11 YX7 11 
YX7 O12 O1  O 0 1 N N N 1.350 28.019 55.929 -4.195 -0.416 -0.761 O12 YX7 12 
YX7 O14 O2  O 0 1 N N N 1.862 32.657 53.208 -1.423 -1.172 1.655  O14 YX7 13 
YX7 O22 O3  O 0 1 N N N 4.100 31.888 53.467 -1.903 -2.212 -0.521 O22 YX7 14 
YX7 O23 O4  O 0 1 N N N 0.777 32.469 56.102 0.683  -0.918 -0.268 O23 YX7 15 
YX7 B13 B1  B 0 1 N N N 2.708 31.489 53.313 -1.670 -1.051 0.262  B13 YX7 16 
YX7 H1  H1  H 0 1 N N N 1.235 33.453 63.538 7.069  0.835  1.021  H1  YX7 17 
YX7 H2  H2  H 0 1 N N N 2.606 34.245 62.689 7.815  -0.482 0.083  H2  YX7 18 
YX7 H3  H3  H 0 1 N N N 0.935 34.865 62.468 7.150  0.942  -0.754 H3  YX7 19 
YX7 H4  H4  H 0 1 N N N 0.293 32.744 61.372 5.616  -0.998 -0.940 H4  YX7 20 
YX7 H5  H5  H 0 1 N N N 1.964 32.124 61.593 5.535  -1.104 0.835  H5  YX7 21 
YX7 H6  H6  H 0 1 N N N 2.850 33.834 60.106 4.598  1.190  0.929  H6  YX7 22 
YX7 H7  H7  H 0 1 N N N 1.237 34.614 59.979 4.679  1.296  -0.846 H7  YX7 23 
YX7 H8  H8  H 0 1 N N N 0.400 32.980 58.575 3.145  -0.643 -1.032 H8  YX7 24 
YX7 H9  H9  H 0 1 N N N 1.464 31.699 59.248 3.064  -0.749 0.743  H9  YX7 25 
YX7 H10 H10 H 0 1 N N N 3.358 32.507 58.024 2.126  1.544  0.838  H10 YX7 26 
YX7 H11 H11 H 0 1 N N N 2.495 34.010 57.553 2.207  1.651  -0.937 H11 YX7 27 
YX7 H12 H12 H 0 1 N N N 3.618 31.101 56.112 -0.350 1.981  -0.067 H12 YX7 28 
YX7 H13 H13 H 0 1 N N N 1.121 30.626 54.560 -1.867 0.258  -1.481 H13 YX7 29 
YX7 H14 H14 H 0 1 N N N 2.373 28.755 53.622 -2.661 1.252  1.292  H14 YX7 30 
YX7 H15 H15 H 0 1 N N N 3.877 29.324 54.422 -2.750 2.227  -0.195 H15 YX7 31 
YX7 H16 H16 H 0 1 N N N 3.304 27.422 57.439 -5.217 2.011  0.848  H16 YX7 32 
YX7 H17 H17 H 0 1 N N N 4.460 28.285 56.480 -6.128 0.801  0.121  H17 YX7 33 
YX7 H18 H18 H 0 1 N N N 0.957 32.385 53.108 -1.340 -0.325 2.115  H18 YX7 34 
YX7 H19 H19 H 0 1 N N N 4.646 31.114 53.535 -1.986 -2.038 -1.468 H19 YX7 35 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YX7 O14 B13 SING N N 1  
YX7 B13 O22 SING N N 2  
YX7 B13 C08 SING N N 3  
YX7 C09 C08 SING N N 4  
YX7 C09 C10 SING N N 5  
YX7 C08 N07 SING N N 6  
YX7 C10 O12 DOUB N N 7  
YX7 C10 N11 SING N N 8  
YX7 N07 C06 SING N N 9  
YX7 O23 C06 DOUB N N 10 
YX7 C06 C05 SING N N 11 
YX7 C05 C04 SING N N 12 
YX7 C04 C03 SING N N 13 
YX7 C03 C02 SING N N 14 
YX7 C02 C01 SING N N 15 
YX7 C01 H1  SING N N 16 
YX7 C01 H2  SING N N 17 
YX7 C01 H3  SING N N 18 
YX7 C02 H4  SING N N 19 
YX7 C02 H5  SING N N 20 
YX7 C03 H6  SING N N 21 
YX7 C03 H7  SING N N 22 
YX7 C04 H8  SING N N 23 
YX7 C04 H9  SING N N 24 
YX7 C05 H10 SING N N 25 
YX7 C05 H11 SING N N 26 
YX7 N07 H12 SING N N 27 
YX7 C08 H13 SING N N 28 
YX7 C09 H14 SING N N 29 
YX7 C09 H15 SING N N 30 
YX7 N11 H16 SING N N 31 
YX7 N11 H17 SING N N 32 
YX7 O14 H18 SING N N 33 
YX7 O22 H19 SING N N 34 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YX7 SMILES           ACDLabs              12.01 "O=C(NC(CC(N)=O)B(O)O)CCCCC"                                                                                    
YX7 InChI            InChI                1.03  "InChI=1S/C9H19BN2O4/c1-2-3-4-5-9(14)12-7(10(15)16)6-8(11)13/h7,15-16H,2-6H2,1H3,(H2,11,13)(H,12,14)/t7-/m1/s1" 
YX7 InChIKey         InChI                1.03  JFQHYAGISMLDGO-SSDOTTSWSA-N                                                                                     
YX7 SMILES_CANONICAL CACTVS               3.385 "CCCCCC(=O)N[C@H](CC(N)=O)B(O)O"                                                                                
YX7 SMILES           CACTVS               3.385 "CCCCCC(=O)N[CH](CC(N)=O)B(O)O"                                                                                 
YX7 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "B([C@@H](CC(=O)N)NC(=O)CCCCC)(O)O"                                                                             
YX7 SMILES           "OpenEye OEToolkits" 2.0.7 "B(C(CC(=O)N)NC(=O)CCCCC)(O)O"                                                                                  
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
YX7 "SYSTEMATIC NAME" ACDLabs              12.01 "[(1S)-3-amino-1-(hexanoylamino)-3-oxopropyl]boronic acid"                
YX7 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[(1~{S})-3-azanyl-1-(hexanoylamino)-3-oxidanylidene-propyl]boronic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YX7 "Create component" 2021-04-05 RCSB 
YX7 "Initial release"  2022-09-28 RCSB 
# 
