data_ZRA
#

_chem_comp.id                                   ZRA
_chem_comp.name                                 "BENZOYL-ARGININE-ALANINE-FLUORO-METHYL KETONE"
_chem_comp.type                                 peptide-like
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C18 H28 F N5 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "benzyl [(2S)-5-[(diaminomethyl)amino]-1-{[(2S)-4-fluoro-3-oxobutan-2-yl]amino}-1-oxopentan-2-yl]carbamate"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    1999-07-08
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       397.444
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    ZRA
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       2AIM
_chem_comp.pdbx_subcomponent_list               "PHQ ARG ALA CF0"
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
ZRA  C1    C1    C  0  1  N  N  N   1.367  12.451   4.961   1.714  -0.591   0.575  C1    PHQ   1  
ZRA  O1    O1    O  0  1  N  N  N   0.582  13.174   5.576   1.458  -1.117   1.640  O1    PHQ   2  
ZRA  O2    O2    O  0  1  N  N  N   1.489  12.390   3.561   2.978  -0.585   0.113  O2    PHQ   3  
ZRA  C2    C2    C  0  1  N  N  N   0.785  13.115   2.577   3.986  -1.221   0.942  C2    PHQ   4  
ZRA  C3    C3    C  0  1  Y  N  N   0.678  13.120   1.062   5.330  -1.118   0.268  C3    PHQ   5  
ZRA  C4    C4    C  0  1  Y  N  N   1.841  13.387   0.330   6.145  -0.029   0.516  C4    PHQ   6  
ZRA  C5    C5    C  0  1  Y  N  N   1.842  13.229  -1.055   7.378   0.066  -0.102  C5    PHQ   7  
ZRA  C6    C6    C  0  1  Y  N  N   0.678  12.814  -1.699   7.795  -0.928  -0.968  C6    PHQ   8  
ZRA  C7    C7    C  0  1  Y  N  N  -0.486  12.560  -0.966   6.981  -2.017  -1.215  C7    PHQ   9  
ZRA  C8    C8    C  0  1  Y  N  N  -0.491  12.712   0.423   5.750  -2.114  -0.593  C8    PHQ  10  
ZRA  CA1   CA1   C  0  1  N  N  S   2.350  11.299   6.902  -0.647  -0.028   0.354  CA1   ARG  11  
ZRA  CB1   CB1   C  0  1  N  N  N   2.183   9.839   7.360  -1.419   1.145  -0.252  CB1   ARG  12  
ZRA  CG    CG    C  0  1  N  N  N   0.843   9.248   7.030  -0.819   2.462   0.245  CG    ARG  13  
ZRA  CD    CD    C  0  1  N  N  N  -0.196  10.020   7.807  -1.591   3.636  -0.361  CD    ARG  14  
ZRA  NE    NE    N  0  1  N  N  N  -1.553   9.651   7.470  -1.014   4.900   0.116  NE    ARG  15  
ZRA  CZ    CZ    C  0  1  N  N  N  -2.422  10.553   7.008  -1.732   6.051  -0.446  CZ    ARG  16  
ZRA  NH1   NH1   N  0  1  N  N  N  -2.089  11.839   6.805  -3.026   6.201   0.232  NH1   ARG  17  
ZRA  NH2   NH2   N  0  1  N  N  N  -3.645  10.136   6.750  -0.934   7.269  -0.251  NH2   ARG  18  
ZRA  C     C     C  0  1  N  N  N   3.829  11.668   6.927  -1.313  -1.323  -0.037  C     ARG  19  
ZRA  N1    N1    N  0  1  N  N  N   2.068  11.460   5.504   0.730  -0.017  -0.147  N1    ARG  20  
ZRA  O     O     O  0  1  N  N  N   4.684  10.913   6.431  -0.697  -2.154  -0.671  O     ARG  21  
ZRA  N2    N2    N  0  1  N  N  N   4.109  12.645   7.793  -2.592  -1.556   0.318  N     ALA  22  
ZRA  CA2   CA2   C  0  1  N  N  S   5.449  12.890   8.294  -3.239  -2.815  -0.062  CA    ALA  23  
ZRA  CT    CT    C  0  1  N  N  N   6.256  11.778   8.954  -4.731  -2.614  -0.120  C     ALA  24  
ZRA  OT    OT    O  0  1  N  N  N   7.498  11.770   8.827  -5.229  -1.635   0.382  O     ALA  25  
ZRA  CB2   CB2   C  0  1  N  N  N   6.004  14.290   8.223  -2.909  -3.891   0.974  CB    ALA  26  
ZRA  CM    CM    C  0  1  N  N  N   5.787  10.569   9.759  -5.603  -3.636  -0.804  C1    CF0  27  
ZRA  F1    F1    F  0  1  N  Y  N   4.859   9.750   8.929  -6.940  -3.234  -0.729  F1    CF0  28  
ZRA  H21   H21   H  0  1  N  N  N   1.146  14.136   2.767   3.730  -2.271   1.084  H21   PHQ  29  
ZRA  H22   H22   H  0  1  N  N  N  -0.256  12.904   2.862   4.026  -0.724   1.911  H22   PHQ  30  
ZRA  H4    H4    H  0  1  N  N  N   2.736  13.715   0.838   5.819   0.747   1.192  H41   PHQ  31  
ZRA  H5    H5    H  0  1  N  N  N   2.738  13.427  -1.625   8.014   0.916   0.090  H51   PHQ  32  
ZRA  H6    H6    H  0  1  N  N  N   0.675  12.688  -2.772   8.758  -0.853  -1.451  H61   PHQ  33  
ZRA  H7    H7    H  0  1  N  N  N  -1.385  12.245  -1.476   7.307  -2.793  -1.891  H71   PHQ  34  
ZRA  H8    H8    H  0  1  N  N  N  -1.387  12.516   0.993   5.115  -2.967  -0.783  H81   PHQ  35  
ZRA  HA1   HA1   H  0  1  N  N  N   1.691  11.888   7.556  -0.640   0.063   1.440  HA1   ARG  36  
ZRA  HB11  HB11  H  0  0  N  N  N   2.954   9.235   6.859  -1.351   1.103  -1.339  HB11  ARG  37  
ZRA  HB12  HB12  H  0  0  N  N  N   2.309   9.808   8.452  -2.465   1.087   0.049  HB12  ARG  38  
ZRA  HG1   HG1   H  0  1  N  N  N   0.648   9.331   5.951  -0.887   2.505   1.332  HG1   ARG  39  
ZRA  HG2   HG2   H  0  1  N  N  N   0.817   8.186   7.314   0.227   2.521  -0.056  HG2   ARG  40  
ZRA  HD1   HD1   H  0  1  N  N  N  -0.042   9.822   8.878  -1.523   3.593  -1.448  HD1   ARG  41  
ZRA  HD2   HD2   H  0  1  N  N  N  -0.066  11.090   7.587  -2.637   3.577  -0.060  HD2   ARG  42  
ZRA  HE    HE    H  0  1  N  N  N  -1.475   8.958   6.753  -1.007   4.936   1.125  HE    ARG  43  
ZRA  HZ    HZ    H  0  1  N  N  N  -1.716  11.396   7.027  -1.897   5.892  -1.512  HZ    ARG  44  
ZRA  HH11  HH11  H  0  0  N  N  N  -2.883  12.339   6.458  -2.901   6.350   1.222  HH11  ARG  45  
ZRA  HH12  HH12  H  0  0  N  N  N  -1.790  12.246   7.668  -3.567   6.946  -0.180  HH12  ARG  46  
ZRA  HH21  HH21  H  0  0  N  N  N  -4.194  10.901   6.413  -0.014   7.167  -0.653  HH21  ARG  47  
ZRA  HH22  HH22  H  0  0  N  N  N  -3.612   9.417   6.055  -1.406   8.076  -0.630  HH22  ARG  48  
ZRA  HN1   HN1   H  0  1  N  N  N   2.431  10.765   4.883   0.934   0.403  -0.997  HN1   ARG  49  
ZRA  HN2   HN2   H  0  1  N  N  N   3.364  13.232   8.110  -3.084  -0.892   0.825  H     ALA  50  
ZRA  HA2   HA2   H  0  1  N  N  N   5.946  12.305   7.506  -2.876  -3.129  -1.041  HA    ALA  51  
ZRA  HB21  HB21  H  0  0  N  N  N   5.282  14.946   7.715  -3.271  -3.577   1.953  HB1   ALA  52  
ZRA  HB22  HB22  H  0  0  N  N  N   6.186  14.664   9.241  -3.390  -4.827   0.692  HB2   ALA  53  
ZRA  HB23  HB23  H  0  0  N  N  N   6.950  14.281   7.661  -1.829  -4.036   1.016  HB3   ALA  54  
ZRA  HM1   HM1   H  0  1  N  N  N   6.657   9.960  10.046  -5.308  -3.723  -1.850  H1    CF0  55  
ZRA  HM2   HM2   H  0  1  N  N  N   5.264  10.911  10.664  -5.485  -4.602  -0.312  H2    CF0  56  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ZRA  C1   N1    SING  N  N   1  
ZRA  C1   O1    DOUB  N  N   2  
ZRA  C1   O2    SING  N  N   3  
ZRA  C2   C3    SING  N  N   4  
ZRA  C2   O2    SING  N  N   5  
ZRA  C2   H21   SING  N  N   6  
ZRA  C2   H22   SING  N  N   7  
ZRA  C3   C4    DOUB  Y  N   8  
ZRA  C3   C8    SING  Y  N   9  
ZRA  C4   C5    SING  Y  N  10  
ZRA  C4   H4    SING  N  N  11  
ZRA  C5   C6    DOUB  Y  N  12  
ZRA  C5   H5    SING  N  N  13  
ZRA  C6   C7    SING  Y  N  14  
ZRA  C6   H6    SING  N  N  15  
ZRA  C7   C8    DOUB  Y  N  16  
ZRA  C7   H7    SING  N  N  17  
ZRA  C8   H8    SING  N  N  18  
ZRA  CA1  CB1   SING  N  N  19  
ZRA  CA1  C     SING  N  N  20  
ZRA  CA1  N1    SING  N  N  21  
ZRA  CA1  HA1   SING  N  N  22  
ZRA  CB1  CG    SING  N  N  23  
ZRA  CB1  HB11  SING  N  N  24  
ZRA  CB1  HB12  SING  N  N  25  
ZRA  CG   CD    SING  N  N  26  
ZRA  CG   HG1   SING  N  N  27  
ZRA  CG   HG2   SING  N  N  28  
ZRA  CD   NE    SING  N  N  29  
ZRA  CD   HD1   SING  N  N  30  
ZRA  CD   HD2   SING  N  N  31  
ZRA  NE   CZ    SING  N  N  32  
ZRA  NE   HE    SING  N  N  33  
ZRA  CZ   NH1   SING  N  N  34  
ZRA  CZ   NH2   SING  N  N  35  
ZRA  CZ   HZ    SING  N  N  36  
ZRA  NH1  HH11  SING  N  N  37  
ZRA  NH1  HH12  SING  N  N  38  
ZRA  NH2  HH21  SING  N  N  39  
ZRA  NH2  HH22  SING  N  N  40  
ZRA  C    N2    SING  N  N  41  
ZRA  C    O     DOUB  N  N  42  
ZRA  CA2  CB2   SING  N  N  43  
ZRA  CA2  CT    SING  N  N  44  
ZRA  CA2  N2    SING  N  N  45  
ZRA  CA2  HA2   SING  N  N  46  
ZRA  CB2  HB21  SING  N  N  47  
ZRA  CB2  HB22  SING  N  N  48  
ZRA  CB2  HB23  SING  N  N  49  
ZRA  CT   CM    SING  N  N  50  
ZRA  CT   OT    DOUB  N  N  51  
ZRA  CM   HM1   SING  N  N  52  
ZRA  CM   HM2   SING  N  N  53  
ZRA  CM   F1    SING  N  N  54  
ZRA  N1   HN1   SING  N  N  55  
ZRA  N2   HN2   SING  N  N  56  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
ZRA  SMILES            ACDLabs               12.01  "FCC(=O)C(NC(=O)C(NC(=O)OCc1ccccc1)CCCNC(N)N)C"  
ZRA  SMILES_CANONICAL  CACTVS                3.370  "C[C@H](NC(=O)[C@H](CCCNC(N)N)NC(=O)OCc1ccccc1)C(=O)CF"  
ZRA  SMILES            CACTVS                3.370  "C[CH](NC(=O)[CH](CCCNC(N)N)NC(=O)OCc1ccccc1)C(=O)CF"  
ZRA  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.0  "CC(C(=O)CF)NC(=O)[C@H](CCCNC(N)N)NC(=O)OCc1ccccc1"  
ZRA  SMILES            "OpenEye OEToolkits"  1.7.0  "CC(C(=O)CF)NC(=O)C(CCCNC(N)N)NC(=O)OCc1ccccc1"  
ZRA  InChI             InChI                 1.03   "InChI=1S/C18H28FN5O4/c1-12(15(25)10-19)23-16(26)14(8-5-9-22-17(20)21)24-18(27)28-11-13-6-3-2-4-7-13/h2-4,6-7,12,14,17,22H,5,8-11,20-21H2,1H3,(H,23,26)(H,24,27)/t12-,14-/m0/s1"  
ZRA  InChIKey          InChI                 1.03   FAAPWXRBXXSQNJ-JSGCOSHPSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
ZRA  "SYSTEMATIC NAME"  ACDLabs               12.01  "benzyl [(2S)-5-[(diaminomethyl)amino]-1-{[(2S)-4-fluoro-3-oxobutan-2-yl]amino}-1-oxopentan-2-yl]carbamate"  
ZRA  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.0  "phenylmethyl N-[(2S)-5-[bis(azanyl)methylamino]-1-[(4-fluoro-3-oxo-butan-2-yl)amino]-1-oxo-pentan-2-yl]carbamate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
ZRA  "Create component"          1999-07-08  RCSB  
ZRA  "Modify subcomponent list"  2011-03-21  RCSB  
ZRA  "Modify descriptor"         2011-06-04  RCSB  
ZRA  "Modify synonyms"           2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     ZRA
_pdbx_chem_comp_synonyms.name        "benzyl [(2S)-5-[(diaminomethyl)amino]-1-{[(2S)-4-fluoro-3-oxobutan-2-yl]amino}-1-oxopentan-2-yl]carbamate"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
