data_02I # _chem_comp.id 02I _chem_comp.name "(6S,7S,8S,10R)-4-amino-8-hydroxy-7,8,9,10-tetrahydro-6H-7,10-epoxyazepino[1,2-e]purin-6-yl dihydrogen phosphate" _chem_comp.type "DNA LINKING" _chem_comp.pdbx_type ATOMN _chem_comp.formula "C10 H12 N5 O6 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2011-07-27 _chem_comp.pdbx_modified_date 2012-06-22 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 329.206 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 02I _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2LG0 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 02I P P P 0 1 N N N 1.192 8.762 10.192 3.019 -1.432 0.033 P 02I 1 02I N1 N1 N 0 1 Y N N -2.978 1.829 8.808 -4.532 -1.245 0.327 N1 02I 2 02I C2 C2 C 0 1 Y N N -4.010 2.560 8.419 -4.706 0.058 0.248 C2 02I 3 02I N3 N3 N 0 1 Y N N -4.071 3.875 8.299 -3.734 0.928 0.030 N3 02I 4 02I C4 C4 C 0 1 Y N N -2.903 4.453 8.659 -2.498 0.454 -0.119 C4 02I 5 02I C5 C5 C 0 1 Y N N -1.754 3.856 9.096 -2.260 -0.943 -0.043 C5 02I 6 02I C6 C6 C 0 1 Y N N -1.846 2.447 9.137 -3.334 -1.821 0.192 C6 02I 7 02I N6 N6 N 0 1 N N N -0.873 1.629 9.483 -3.160 -3.191 0.279 N6 02I 8 02I N7 N7 N 0 1 Y N N -0.764 4.824 9.371 -0.943 -1.140 -0.232 N7 02I 9 02I C8 C8 C 0 1 Y N N -1.385 5.949 9.113 -0.363 0.006 -0.415 C8 02I 10 02I N9 N9 N 0 1 Y N N -2.647 5.788 8.646 -1.294 1.017 -0.342 N9 02I 11 02I "C1'" "C1'" C 0 1 N N R -3.557 6.883 8.321 -0.905 2.431 -0.491 "C1'" 02I 12 02I OP3 OP3 O 0 1 N Y N 1.969 8.763 11.449 3.806 -1.793 1.390 OP3 02I 13 02I "C2'" "C2'" C 0 1 N N N -4.119 7.436 9.613 -0.287 2.842 0.873 "C2'" 02I 14 02I OP2 OP2 O 0 1 N N N 0.660 10.030 9.650 2.313 -2.757 -0.547 OP2 02I 15 02I "C3'" "C3'" C 0 1 N N S -3.053 8.418 10.123 1.174 2.345 0.777 "C3'" 02I 16 02I "O3'" "O3'" O 0 1 N N N -3.704 9.666 10.262 2.083 3.427 0.990 "O3'" 02I 17 02I "C4'" "C4'" C 0 1 N N S -2.011 8.399 8.979 1.305 1.808 -0.660 "C4'" 02I 18 02I "O4'" "O4'" O 0 1 N N N -2.758 7.954 7.842 0.230 2.431 -1.395 "O4'" 02I 19 02I "C5'" "C5'" C 0 1 N N S -0.837 7.382 9.150 1.100 0.287 -0.677 "C5'" 02I 20 02I "O5'" "O5'" O 0 1 N N N -0.015 7.680 10.284 1.898 -0.319 0.342 "O5'" 02I 21 02I H2 H2 H 0 1 N N N -4.910 2.018 8.170 -5.709 0.441 0.368 H2 02I 22 02I H1N6 H1N6 H 0 0 N N N -0.097 1.755 8.865 -2.276 -3.576 0.176 H1N6 02I 23 02I H2N6 H2N6 H 0 0 N N N -1.195 0.684 9.425 -3.923 -3.768 0.442 H2N6 02I 24 02I "H1'" "H1'" H 0 1 N N N -4.352 6.583 7.622 -1.727 3.074 -0.805 "H1'" 02I 25 02I "H12'" "H12'" H 0 0 N N N -5.069 7.959 9.429 -0.316 3.924 0.996 "H12'" 02I 26 02I "H22'" "H22'" H 0 0 N N N -4.280 6.628 10.342 -0.806 2.347 1.693 "H22'" 02I 27 02I "H3'" "H3'" H 0 1 N N N -2.607 8.061 11.063 1.353 1.550 1.500 "H3'" 02I 28 02I "H4'" "H4'" H 0 1 N N N -1.606 9.410 8.826 2.277 2.067 -1.079 "H4'" 02I 29 02I "H5'" "H5'" H 0 1 N N N -0.210 7.493 8.253 1.382 -0.112 -1.651 "H5'" 02I 30 02I HOP3 HO3P H 0 0 N N N 2.623 9.451 11.417 4.498 -2.459 1.278 HOP3 02I 31 02I HOP2 HOP2 H 0 0 N N N 1.227 10.747 9.907 1.673 -3.158 0.056 HOP2 02I 32 02I "HO3'" "HO3'" H 0 0 N Y N -3.084 10.314 10.577 2.007 3.839 1.861 "HO3'" 02I 33 02I OP1 OP1 O 0 1 N N N 2.302 9.515 10.795 3.975 -0.904 -0.966 OP1 02I 34 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 02I P "O5'" SING N N 1 02I P OP3 SING N N 2 02I N1 C6 SING Y N 3 02I C2 N1 DOUB Y N 4 02I N3 C2 SING Y N 5 02I N3 C4 DOUB Y N 6 02I C4 C5 SING Y N 7 02I C5 C6 DOUB Y N 8 02I C5 N7 SING Y N 9 02I C6 N6 SING N N 10 02I N6 H2N6 SING N N 11 02I C8 N7 DOUB Y N 12 02I C8 "C5'" SING N N 13 02I N9 C4 SING Y N 14 02I N9 C8 SING Y N 15 02I "C1'" N9 SING N N 16 02I "C1'" "C2'" SING N N 17 02I OP3 HOP3 SING N N 18 02I "C2'" "C3'" SING N N 19 02I "C2'" "H12'" SING N N 20 02I OP2 P SING N N 21 02I OP2 HOP2 SING N N 22 02I "C3'" "O3'" SING N N 23 02I "C3'" "H3'" SING N N 24 02I "O3'" "HO3'" SING N N 25 02I "C4'" "C3'" SING N N 26 02I "C4'" "C5'" SING N N 27 02I "O4'" "C1'" SING N N 28 02I "O4'" "C4'" SING N N 29 02I "C5'" "O5'" SING N N 30 02I H2 C2 SING N N 31 02I H1N6 N6 SING N N 32 02I "H1'" "C1'" SING N N 33 02I "H22'" "C2'" SING N N 34 02I "H4'" "C4'" SING N N 35 02I "H5'" "C5'" SING N N 36 02I P OP1 DOUB N N 37 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 02I SMILES ACDLabs 12.01 "O=P(O)(O)OC3c2nc1c(ncnc1N)n2C4OC3C(O)C4" 02I InChI InChI 1.03 "InChI=1S/C10H12N5O6P/c11-8-5-9(13-2-12-8)15-4-1-3(16)6(20-4)7(10(15)14-5)21-22(17,18)19/h2-4,6-7,16H,1H2,(H2,11,12,13)(H2,17,18,19)/t3-,4+,6-,7+/m0/s1" 02I InChIKey InChI 1.03 CFRPMSDTAMOMAA-VYFZPWGTSA-N 02I SMILES_CANONICAL CACTVS 3.370 "Nc1ncnc2n3[C@H]4C[C@H](O)[C@H](O4)[C@@H](O[P](O)(O)=O)c3nc12" 02I SMILES CACTVS 3.370 "Nc1ncnc2n3[CH]4C[CH](O)[CH](O4)[CH](O[P](O)(O)=O)c3nc12" 02I SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1nc(c2c(n1)n3c(n2)[C@@H]([C@@H]4[C@H](C[C@H]3O4)O)OP(=O)(O)O)N" 02I SMILES "OpenEye OEToolkits" 1.7.6 "c1nc(c2c(n1)n3c(n2)C(C4C(CC3O4)O)OP(=O)(O)O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 02I "SYSTEMATIC NAME" ACDLabs 12.01 "(6S,7S,8S,10R)-4-amino-8-hydroxy-7,8,9,10-tetrahydro-6H-7,10-epoxyazepino[1,2-e]purin-6-yl dihydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 02I "Create component" 2011-07-27 RCSB 02I "Modify parent residue" 2011-07-27 RCSB 02I "Modify linking type" 2012-05-02 RCSB #