data_02P # _chem_comp.id 02P _chem_comp.name "D-phenylalanyl-N-[(4-chloro-1-methylpyridinium-2-yl)methyl]-L-prolinamide" _chem_comp.type peptide-like _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H26 Cl N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 2011-03-18 _chem_comp.pdbx_modified_date 2012-03-02 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 401.910 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 02P _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3QX5 _chem_comp.pdbx_subcomponent_list "DPN PRO NNX" _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 02P N10 N10 N 0 1 N N N 16.424 -15.512 23.306 -3.866 -1.681 1.275 N DPN 1 02P C8 C8 C 0 1 N N R 17.685 -14.788 23.308 -3.593 -0.536 0.396 CA DPN 2 02P C9 C9 C 0 1 N N N 17.408 -13.437 22.714 -2.147 -0.562 -0.027 C DPN 3 02P O12 O12 O 0 1 N N N 16.478 -12.761 23.134 -1.512 -1.592 0.045 O DPN 4 02P C7 C7 C 0 1 N N N 18.172 -14.691 24.749 -4.488 -0.620 -0.843 CB DPN 5 02P C4 C4 C 0 1 Y N N 19.574 -14.140 24.831 -5.930 -0.471 -0.431 CG DPN 6 02P C3 C3 C 0 1 Y N N 19.781 -12.981 25.568 -6.509 0.783 -0.382 CD1 DPN 7 02P C5 C5 C 0 1 Y N N 20.646 -14.766 24.194 -6.675 -1.589 -0.105 CD2 DPN 8 02P C26 C26 C 0 1 Y N N 21.055 -12.441 25.669 -7.832 0.919 -0.005 CE1 DPN 9 02P C6 C6 C 0 1 Y N N 21.924 -14.222 24.299 -7.998 -1.453 0.272 CE2 DPN 10 02P C1 C1 C 0 1 Y N N 22.130 -13.062 25.039 -8.576 -0.199 0.322 CZ DPN 11 02P N11 N11 N 0 1 N N N 18.176 -13.017 21.707 -1.559 0.561 -0.486 N PRO 12 02P C13 C13 C 0 1 N N S 17.885 -11.711 21.112 -0.162 0.678 -0.929 CA PRO 13 02P C17 C17 C 0 1 N N N 16.451 -11.641 20.642 0.766 0.311 0.199 C PRO 14 02P O28 O28 O 0 1 N N N 15.957 -12.568 20.006 0.313 -0.018 1.275 O PRO 15 02P C15 C15 C 0 1 N N N 18.857 -11.613 19.943 0.067 2.147 -1.341 CB PRO 16 02P C16 C16 C 0 1 N N N 19.960 -12.605 20.252 -1.054 2.902 -0.576 CG PRO 17 02P C14 C14 C 0 1 N N N 19.316 -13.698 21.090 -2.213 1.875 -0.631 CD PRO 18 02P CL2 CL2 CL 0 0 N N N 12.270 -7.534 24.542 7.285 -2.257 -0.843 CL2 NNX 19 02P N18 N18 N 0 1 N N N 15.748 -10.550 20.945 2.101 0.348 0.013 N18 NNX 20 02P C19 C19 C 0 1 N N N 14.355 -10.336 20.567 3.003 -0.009 1.111 C19 NNX 21 02P C20 C20 C 0 1 Y N N 13.428 -10.279 21.769 4.432 0.113 0.646 C20 NNX 22 02P N21 N21 N 1 1 Y N N 12.720 -11.362 22.146 5.035 1.285 0.696 N21 NNX 23 02P C22 C22 C 0 1 Y N N 13.300 -9.087 22.473 5.095 -1.004 0.178 C22 NNX 24 02P C23 C23 C 0 1 Y N N 12.447 -9.034 23.576 6.411 -0.881 -0.247 C23 NNX 25 02P C24 C24 C 0 1 Y N N 11.723 -10.161 23.942 7.010 0.370 -0.184 C24 NNX 26 02P C25 C25 C 0 1 Y N N 11.889 -11.320 23.201 6.284 1.440 0.301 C25 NNX 27 02P C27 C27 C 0 1 N N N 12.848 -12.626 21.409 4.299 2.445 1.204 C27 NNX 28 02P HN10 HN10 H 0 0 N N N 16.084 -15.588 22.369 -3.683 -2.553 0.801 H DPN 29 02P HN1A HN1A H 0 0 N N N 16.564 -16.427 23.685 -3.335 -1.615 2.130 H2 DPN 30 02P H8 H8 H 0 1 N N N 18.470 -15.287 22.720 -3.799 0.390 0.931 HA DPN 31 02P H7 H7 H 0 1 N N N 18.162 -15.697 25.193 -4.346 -1.585 -1.329 HB2 DPN 32 02P H7A H7A H 0 1 N N N 17.498 -14.023 25.305 -4.224 0.179 -1.536 HB3 DPN 33 02P H3 H3 H 0 1 N N N 18.950 -12.500 26.063 -5.927 1.657 -0.636 HD1 DPN 34 02P H5 H5 H 0 1 N N N 20.486 -15.668 23.622 -6.222 -2.569 -0.144 HD2 DPN 35 02P H26 H26 H 0 1 N N N 21.213 -11.537 26.238 -8.284 1.899 0.034 HE1 DPN 36 02P H6 H6 H 0 1 N N N 22.756 -14.701 23.805 -8.579 -2.327 0.527 HE2 DPN 37 02P H1 H1 H 0 1 N N N 23.122 -12.644 25.125 -9.611 -0.093 0.612 HZ DPN 38 02P H13 H13 H 0 1 N N N 18.004 -10.882 21.825 0.011 0.022 -1.783 HA PRO 39 02P H15 H15 H 0 1 N N N 18.357 -11.866 18.996 1.051 2.488 -1.022 HB2 PRO 40 02P H15A H15A H 0 0 N N N 19.261 -10.594 19.854 -0.055 2.269 -2.417 HB3 PRO 41 02P H16 H16 H 0 1 N N N 20.775 -12.119 20.808 -1.325 3.824 -1.091 HG2 PRO 42 02P H16A H16A H 0 0 N N N 20.378 -13.023 19.324 -0.760 3.104 0.454 HG3 PRO 43 02P H14 H14 H 0 1 N N N 20.011 -14.092 21.846 -2.730 1.937 -1.589 HD2 PRO 44 02P H14A H14A H 0 0 N N N 18.994 -14.548 20.470 -2.910 2.045 0.189 HD3 PRO 45 02P HN18 HN18 H 0 0 N N N 16.206 -9.830 21.466 2.463 0.610 -0.847 HN18 NNX 46 02P H19 H19 H 0 1 N N N 14.284 -9.381 20.026 2.836 0.664 1.952 H19 NNX 47 02P H19A H19A H 0 0 N N N 14.037 -11.168 19.921 2.809 -1.035 1.422 H19A NNX 48 02P H22 H22 H 0 1 N N N 13.855 -8.212 22.169 4.597 -1.962 0.144 H22 NNX 49 02P H24 H24 H 0 1 N N N 11.047 -10.135 24.784 8.032 0.503 -0.507 H24 NNX 50 02P H25 H25 H 0 1 N N N 11.339 -12.208 23.477 6.744 2.415 0.357 H25 NNX 51 02P H27 H27 H 0 1 N N N 12.196 -13.385 21.866 4.361 2.467 2.292 H27 NNX 52 02P H27A H27A H 0 0 N N N 12.552 -12.471 20.361 4.733 3.358 0.796 H27A NNX 53 02P H27B H27B H 0 0 N N N 13.892 -12.969 21.448 3.254 2.374 0.901 H27B NNX 54 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 02P C1 C6 DOUB Y N 1 02P C1 C26 SING Y N 2 02P CL2 C23 SING N N 3 02P C3 C4 SING Y N 4 02P C3 C26 DOUB Y N 5 02P C4 C5 DOUB Y N 6 02P C4 C7 SING N N 7 02P C5 C6 SING Y N 8 02P C7 C8 SING N N 9 02P C8 C9 SING N N 10 02P C8 N10 SING N N 11 02P C9 N11 SING N N 12 02P C9 O12 DOUB N N 13 02P N11 C13 SING N N 14 02P N11 C14 SING N N 15 02P C13 C15 SING N N 16 02P C13 C17 SING N N 17 02P C14 C16 SING N N 18 02P C15 C16 SING N N 19 02P C17 N18 SING N N 20 02P C17 O28 DOUB N N 21 02P N18 C19 SING N N 22 02P C19 C20 SING N N 23 02P C20 N21 DOUB Y N 24 02P C20 C22 SING Y N 25 02P N21 C25 SING Y N 26 02P N21 C27 SING N N 27 02P C22 C23 DOUB Y N 28 02P C23 C24 SING Y N 29 02P C24 C25 DOUB Y N 30 02P C1 H1 SING N N 31 02P C3 H3 SING N N 32 02P C5 H5 SING N N 33 02P C6 H6 SING N N 34 02P C7 H7 SING N N 35 02P C7 H7A SING N N 36 02P C8 H8 SING N N 37 02P N10 HN10 SING N N 38 02P N10 HN1A SING N N 39 02P C13 H13 SING N N 40 02P C14 H14 SING N N 41 02P C14 H14A SING N N 42 02P C15 H15 SING N N 43 02P C15 H15A SING N N 44 02P C16 H16 SING N N 45 02P C16 H16A SING N N 46 02P N18 HN18 SING N N 47 02P C19 H19 SING N N 48 02P C19 H19A SING N N 49 02P C22 H22 SING N N 50 02P C24 H24 SING N N 51 02P C25 H25 SING N N 52 02P C26 H26 SING N N 53 02P C27 H27 SING N N 54 02P C27 H27A SING N N 55 02P C27 H27B SING N N 56 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 02P SMILES ACDLabs 12.01 "O=C(NCc1[n+](ccc(Cl)c1)C)C3N(C(=O)C(N)Cc2ccccc2)CCC3" 02P SMILES_CANONICAL CACTVS 3.370 "C[n+]1ccc(Cl)cc1CNC(=O)[C@@H]2CCCN2C(=O)[C@H](N)Cc3ccccc3" 02P SMILES CACTVS 3.370 "C[n+]1ccc(Cl)cc1CNC(=O)[CH]2CCCN2C(=O)[CH](N)Cc3ccccc3" 02P SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "C[n+]1ccc(cc1CNC(=O)[C@@H]2CCCN2C(=O)[C@@H](Cc3ccccc3)N)Cl" 02P SMILES "OpenEye OEToolkits" 1.7.0 "C[n+]1ccc(cc1CNC(=O)C2CCCN2C(=O)C(Cc3ccccc3)N)Cl" 02P InChI InChI 1.03 "InChI=1S/C21H25ClN4O2/c1-25-11-9-16(22)13-17(25)14-24-20(27)19-8-5-10-26(19)21(28)18(23)12-15-6-3-2-4-7-15/h2-4,6-7,9,11,13,18-19H,5,8,10,12,14,23H2,1H3/p+1/t18-,19+/m1/s1" 02P InChIKey InChI 1.03 BNDOLKJAONQVEV-MOPGFXCFSA-O # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 02P "SYSTEMATIC NAME" ACDLabs 12.01 "D-phenylalanyl-N-[(4-chloro-1-methylpyridinium-2-yl)methyl]-L-prolinamide" 02P "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "(2S)-1-[(2R)-2-azanyl-3-phenyl-propanoyl]-N-[(4-chloro-1-methyl-pyridin-1-ium-2-yl)methyl]pyrrolidine-2-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 02P "Create component" 2011-03-18 PDBJ 02P "Other modification" 2011-03-21 PDBJ 02P "Modify aromatic_flag" 2011-06-04 RCSB 02P "Modify descriptor" 2011-06-04 RCSB #