data_04Q # _chem_comp.id 04Q _chem_comp.name N-benzylglycine _chem_comp.type "PEPTIDE LINKING" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C9 H11 N O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2012-06-22 _chem_comp.pdbx_modified_date 2023-11-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 165.189 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 04Q _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4AYV _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 04Q N N5 N 0 1 N N N Y Y N 31.868 13.041 23.707 0.932 0.036 0.182 N5 04Q 1 04Q C9 C9 C 0 1 N N N N N N 31.181 11.955 22.933 -0.122 0.209 1.190 C9 04Q 2 04Q C10 C10 C 0 1 N N N Y N N 33.098 13.590 23.112 2.265 0.141 0.789 C10 04Q 3 04Q C16 C16 C 0 1 Y N N N N N 32.127 10.819 22.731 -1.472 0.095 0.531 C16 04Q 4 04Q C C17 C 0 1 N N N Y N Y 32.677 14.542 21.998 3.318 -0.040 -0.274 C17 04Q 5 04Q C21 C21 C 0 1 Y N N N N N 32.740 10.195 23.855 -2.091 -1.137 0.431 C21 04Q 6 04Q C22 C22 C 0 1 Y N N N N N 32.415 10.404 21.439 -2.095 1.224 0.031 C22 04Q 7 04Q OXT O23 O 0 1 N Y N Y N Y 33.612 14.684 21.068 4.619 0.017 0.053 O23 04Q 8 04Q O O24 O 0 1 N N N Y N Y 31.623 15.137 21.867 2.991 -0.237 -1.420 O24 04Q 9 04Q C28 C28 C 0 1 Y N N N N N 33.656 9.149 23.674 -3.329 -1.242 -0.174 C28 04Q 10 04Q C29 C29 C 0 1 Y N N N N N 33.335 9.350 21.252 -3.333 1.119 -0.574 C29 04Q 11 04Q C34 C34 C 0 1 Y N N N N N 33.959 8.722 22.353 -3.949 -0.114 -0.678 C34 04Q 12 04Q H91C H91C H 0 0 N N N N N N 30.301 11.605 23.493 -0.024 -0.563 1.954 H91C 04Q 13 04Q H92C H92C H 0 0 N N N N N N 30.862 12.346 21.955 -0.025 1.191 1.653 H92C 04Q 14 04Q H101 H101 H 0 0 N N N Y N N 33.675 14.134 23.874 2.379 1.123 1.249 H101 04Q 15 04Q H102 H102 H 0 0 N N N Y N N 33.712 12.776 22.699 2.380 -0.631 1.550 H102 04Q 16 04Q H21 H21 H 0 1 N N N N N N 32.498 10.530 24.853 -1.606 -2.018 0.825 H21 04Q 17 04Q H22 H22 H 0 1 N N N N N N 31.944 10.879 20.591 -1.613 2.187 0.114 H22 04Q 18 04Q HXT H23 H 0 1 N Y N Y N Y 33.298 15.270 20.390 5.257 -0.106 -0.663 H23 04Q 19 04Q H28 H28 H 0 1 N N N N N N 34.124 8.676 24.525 -3.812 -2.204 -0.253 H28 04Q 20 04Q H29 H29 H 0 1 N N N N N N 33.566 9.018 20.251 -3.820 2.001 -0.964 H29 04Q 21 04Q H34 H34 H 0 1 N N N N N N 34.664 7.920 22.191 -4.917 -0.196 -1.151 H34 04Q 22 04Q H H2 H 0 1 N Y N Y Y N 31.220 13.795 23.815 0.825 -0.840 -0.307 H2 04Q 23 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 04Q N C9 SING N N 1 04Q N C10 SING N N 2 04Q C9 C16 SING N N 3 04Q C10 C SING N N 4 04Q C16 C21 SING Y N 5 04Q C16 C22 DOUB Y N 6 04Q C OXT SING N N 7 04Q C O DOUB N N 8 04Q C21 C28 DOUB Y N 9 04Q C22 C29 SING Y N 10 04Q C28 C34 SING Y N 11 04Q C29 C34 DOUB Y N 12 04Q C9 H91C SING N N 13 04Q C9 H92C SING N N 14 04Q C10 H101 SING N N 15 04Q C10 H102 SING N N 16 04Q C21 H21 SING N N 17 04Q C22 H22 SING N N 18 04Q OXT HXT SING N N 19 04Q C28 H28 SING N N 20 04Q C29 H29 SING N N 21 04Q C34 H34 SING N N 22 04Q N H SING N N 23 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 04Q SMILES ACDLabs 12.01 "O=C(O)CNCc1ccccc1" 04Q InChI InChI 1.03 "InChI=1S/C9H11NO2/c11-9(12)7-10-6-8-4-2-1-3-5-8/h1-5,10H,6-7H2,(H,11,12)" 04Q InChIKey InChI 1.03 KGSVNOLLROCJQM-UHFFFAOYSA-N 04Q SMILES_CANONICAL CACTVS 3.385 "OC(=O)CNCc1ccccc1" 04Q SMILES CACTVS 3.385 "OC(=O)CNCc1ccccc1" 04Q SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "c1ccc(cc1)CNCC(=O)O" 04Q SMILES "OpenEye OEToolkits" 1.9.2 "c1ccc(cc1)CNCC(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 04Q "SYSTEMATIC NAME" ACDLabs 12.01 N-benzylglycine 04Q "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "2-[(phenylmethyl)amino]ethanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 04Q "Create component" 2012-06-22 EBI 04Q "Modify descriptor" 2014-09-05 RCSB 04Q "Modify linking type" 2022-06-23 RCSB 04Q "Modify backbone" 2023-11-03 PDBE #