data_04V # _chem_comp.id 04V _chem_comp.name "(2S)-pyrrolidine-2-carboximidic acid" _chem_comp.type "L-PEPTIDE LINKING" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C5 H10 N2 O" _chem_comp.mon_nstd_parent_comp_id PRO _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2012-10-02 _chem_comp.pdbx_modified_date 2019-04-14 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 114.146 _chem_comp.one_letter_code P _chem_comp.three_letter_code 04V _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4BCB _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 04V N7 N N 0 1 N N N 38.549 37.303 81.908 -0.795 -1.137 -0.167 N7 04V 1 04V C6 CD C 0 1 N N N 38.365 35.896 81.480 -2.208 -0.702 -0.109 C6 04V 2 04V C5 CG C 0 1 N N N 37.854 35.995 80.049 -2.205 0.802 0.221 C5 04V 3 04V C4 CB C 0 1 N N N 38.210 37.416 79.611 -0.712 1.192 0.315 C4 04V 4 04V C3 CA C 0 1 N N S 38.129 38.237 80.884 -0.011 0.079 -0.505 C3 04V 5 04V C1 C C 0 1 N N N 36.693 38.686 81.092 1.424 -0.076 -0.072 C1 04V 6 04V N2 N2 N 0 1 N N N 35.843 37.960 81.663 1.839 -1.207 0.391 N2 04V 7 04V OXT OXT O 0 1 N Y N 36.301 39.711 80.318 2.274 0.966 -0.169 OXT 04V 8 04V H61C HD2 H 0 0 N N N 39.320 35.351 81.515 -2.687 -0.869 -1.074 H61C 04V 9 04V H62C HD3 H 0 0 N N N 37.629 35.388 82.121 -2.734 -1.253 0.670 H62C 04V 10 04V H3 HA H 0 1 N N N 38.801 39.106 80.828 -0.072 0.291 -1.572 H3 04V 11 04V H51C HG2 H 0 0 N N N 38.352 35.254 79.406 -2.694 1.365 -0.574 H51C 04V 12 04V H52C HG3 H 0 0 N N N 36.766 35.839 80.013 -2.703 0.980 1.174 H52C 04V 13 04V H41C HB2 H 0 0 N N N 39.226 37.450 79.190 -0.540 2.169 -0.136 H41C 04V 14 04V H42C HB3 H 0 0 N N N 37.491 37.784 78.864 -0.374 1.179 1.351 H42C 04V 15 04V H21N HN2 H 0 0 N N N 34.907 38.249 81.461 2.763 -1.307 0.670 H21N 04V 16 04V HXT HXT H 0 1 N Y N 35.396 39.926 80.511 3.172 0.771 0.132 HXT 04V 17 04V H2 H H 0 1 N Y N 38.008 37.463 82.734 -0.500 -1.523 0.717 H2 04V 18 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 04V N7 C6 SING N N 1 04V N7 C3 SING N N 2 04V C6 C5 SING N N 3 04V C5 C4 SING N N 4 04V C4 C3 SING N N 5 04V C3 C1 SING N N 6 04V C1 N2 DOUB N N 7 04V C1 OXT SING N N 8 04V C6 H61C SING N N 9 04V C6 H62C SING N N 10 04V C3 H3 SING N N 11 04V C5 H51C SING N N 12 04V C5 H52C SING N N 13 04V C4 H41C SING N N 14 04V C4 H42C SING N N 15 04V N2 H21N SING N N 16 04V OXT HXT SING N N 17 04V N7 H2 SING N N 18 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 04V SMILES ACDLabs 12.01 "[N@H]=C(O)C1NCCC1" 04V InChI InChI 1.03 "InChI=1S/C5H10N2O/c6-5(8)4-2-1-3-7-4/h4,7H,1-3H2,(H2,6,8)/t4-/m0/s1" 04V InChIKey InChI 1.03 VLJNHYLEOZPXFW-BYPYZUCNSA-N 04V SMILES_CANONICAL CACTVS 3.385 "OC(=N)[C@@H]1CCCN1" 04V SMILES CACTVS 3.385 "OC(=N)[CH]1CCCN1" 04V SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "[H]/N=C(/[C@@H]1CCCN1)\O" 04V SMILES "OpenEye OEToolkits" 1.9.2 "C1CC(NC1)C(=N)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 04V "SYSTEMATIC NAME" ACDLabs 12.01 "(2S)-pyrrolidine-2-carboximidic acid" 04V "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "(2S)-pyrrolidine-2-carboximidic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 04V "Create component" 2012-10-02 EBI 04V "Initial release" 2013-03-13 RCSB 04V "Modify descriptor" 2014-09-05 RCSB 04V "Other modification" 2019-04-14 PDBE ##