data_05E # _chem_comp.id 05E _chem_comp.name "2-azanylethyl [(2~{S},3~{S},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-2,4,5-tris(oxidanyl)oxan-3-yl] hydrogen phosphate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C8 H18 N O9 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-01-19 _chem_comp.pdbx_modified_date 2022-04-22 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 303.204 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 05E _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7WLD _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 05E C80 C1 C 0 1 N N S 106.154 106.316 105.851 -1.632 0.870 1.399 C80 05E 1 05E C81 C2 C 0 1 N N S 105.954 107.726 105.453 -0.745 1.198 0.195 C81 05E 2 05E C85 C3 C 0 1 N N N 110.589 107.240 104.895 4.271 -0.422 0.473 C85 05E 3 05E C86 C4 C 0 1 N N N 111.886 107.964 105.278 4.879 -1.826 0.481 C86 05E 4 05E C90 C5 C 0 1 N N S 104.700 107.949 104.751 -1.569 1.062 -1.089 C90 05E 5 05E C92 C6 C 0 1 N N S 104.422 106.978 103.688 -2.149 -0.354 -1.163 C92 05E 6 05E C94 C7 C 0 1 N N R 104.582 105.502 104.098 -2.982 -0.622 0.093 C94 05E 7 05E C95 C8 C 0 1 N N N 104.574 104.715 102.920 -3.516 -2.055 0.056 C95 05E 8 05E N87 N1 N 0 1 N N N 112.384 107.404 106.547 4.696 -2.447 -0.837 N87 05E 9 05E O82 O1 O 0 1 N N N 107.113 108.403 104.815 0.359 0.291 0.154 O82 05E 10 05E O84 O2 O 0 1 N N N 109.772 108.158 104.218 2.857 -0.516 0.293 O84 05E 11 05E O88 O3 O 0 1 N N N 108.259 106.132 104.067 2.249 1.650 -1.067 O88 05E 12 05E O89 O4 O 0 1 N N N 107.994 107.958 102.408 2.090 1.591 1.451 O89 05E 13 05E O91 O5 O 0 1 N N N 104.721 109.316 104.185 -0.730 1.296 -2.222 O91 05E 14 05E O93 O6 O 0 1 N N N 103.047 107.110 103.338 -2.979 -0.471 -2.320 O93 05E 15 05E O96 O7 O 0 1 N N N 103.511 103.773 102.963 -4.387 -2.268 1.168 O96 05E 16 05E O97 O8 O 0 1 N N N 105.944 105.346 104.800 -2.164 -0.448 1.252 O97 05E 17 05E P83 P1 P 0 1 N N N 108.266 107.634 103.858 1.893 0.772 0.235 P83 05E 18 05E O1 O9 O 0 1 N Y N 105.350 106.025 107.009 -2.705 1.811 1.470 O1 05E 19 05E H1 H1 H 0 1 N N N 107.206 106.226 106.161 -1.040 0.924 2.312 H1 05E 20 05E H2 H2 H 0 1 N N N 105.829 108.258 106.408 -0.374 2.219 0.283 H2 05E 21 05E H3 H3 H 0 1 N N N 110.079 106.881 105.801 4.485 0.072 1.421 H3 05E 22 05E H4 H4 H 0 1 N N N 110.816 106.386 104.240 4.704 0.156 -0.343 H4 05E 23 05E H5 H5 H 0 1 N N N 112.638 107.818 104.489 5.943 -1.760 0.707 H5 05E 24 05E H6 H6 H 0 1 N N N 111.687 109.039 105.401 4.384 -2.432 1.240 H6 05E 25 05E H7 H7 H 0 1 N N N 103.881 107.898 105.484 -2.381 1.788 -1.080 H7 05E 26 05E H8 H8 H 0 1 N N N 105.064 107.179 102.818 -1.336 -1.078 -1.222 H8 05E 27 05E H9 H9 H 0 1 N N N 103.772 105.215 104.785 -3.818 0.077 0.131 H9 05E 28 05E H10 H10 H 0 1 N N N 105.531 104.179 102.835 -4.065 -2.214 -0.872 H10 05E 29 05E H11 H11 H 0 1 N N N 104.443 105.371 102.047 -2.682 -2.755 0.109 H11 05E 30 05E H12 H12 H 0 1 N N N 113.230 107.869 106.808 5.091 -1.871 -1.566 H12 05E 31 05E H13 H13 H 0 1 N N N 111.697 107.537 107.262 5.089 -3.376 -0.858 H13 05E 32 05E H15 H15 H 0 1 N N N 108.084 105.698 103.240 2.142 1.176 -1.903 H15 05E 33 05E H16 H16 H 0 1 N N N 104.901 109.943 104.876 -1.188 1.226 -3.071 H16 05E 34 05E H17 H17 H 0 1 N N N 102.872 108.005 103.071 -3.384 -1.342 -2.427 H17 05E 35 05E H18 H18 H 0 1 N N N 103.517 103.252 102.169 -4.764 -3.158 1.208 H18 05E 36 05E H19 H19 H 0 1 N N N 105.511 106.679 107.679 -3.309 1.664 2.211 H19 05E 37 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 05E O89 P83 DOUB N N 1 05E C95 O96 SING N N 2 05E C95 C94 SING N N 3 05E O93 C92 SING N N 4 05E C92 C94 SING N N 5 05E C92 C90 SING N N 6 05E P83 O88 SING N N 7 05E P83 O84 SING N N 8 05E P83 O82 SING N N 9 05E C94 O97 SING N N 10 05E O91 C90 SING N N 11 05E O84 C85 SING N N 12 05E C90 C81 SING N N 13 05E O97 C80 SING N N 14 05E O82 C81 SING N N 15 05E C85 C86 SING N N 16 05E C86 N87 SING N N 17 05E C81 C80 SING N N 18 05E C80 O1 SING N N 19 05E C80 H1 SING N N 20 05E C81 H2 SING N N 21 05E C85 H3 SING N N 22 05E C85 H4 SING N N 23 05E C86 H5 SING N N 24 05E C86 H6 SING N N 25 05E C90 H7 SING N N 26 05E C92 H8 SING N N 27 05E C94 H9 SING N N 28 05E C95 H10 SING N N 29 05E C95 H11 SING N N 30 05E N87 H12 SING N N 31 05E N87 H13 SING N N 32 05E O88 H15 SING N N 33 05E O91 H16 SING N N 34 05E O93 H17 SING N N 35 05E O96 H18 SING N N 36 05E O1 H19 SING N N 37 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 05E InChI InChI 1.03 "InChI=1S/C8H18NO9P/c9-1-2-16-19(14,15)18-7-6(12)5(11)4(3-10)17-8(7)13/h4-8,10-13H,1-3,9H2,(H,14,15)/t4-,5-,6+,7+,8+/m1/s1" 05E InChIKey InChI 1.03 AMJFTSXJOORFJX-HEIBUPTGSA-N 05E SMILES_CANONICAL CACTVS 3.385 "NCCO[P](O)(=O)O[C@@H]1[C@@H](O)O[C@H](CO)[C@@H](O)[C@@H]1O" 05E SMILES CACTVS 3.385 "NCCO[P](O)(=O)O[CH]1[CH](O)O[CH](CO)[CH](O)[CH]1O" 05E SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C(COP(=O)(O)O[C@H]1[C@H]([C@@H]([C@H](O[C@@H]1O)CO)O)O)N" 05E SMILES "OpenEye OEToolkits" 2.0.7 "C(COP(=O)(O)OC1C(C(C(OC1O)CO)O)O)N" # _pdbx_chem_comp_identifier.comp_id 05E _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-azanylethyl [(2~{S},3~{S},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-2,4,5-tris(oxidanyl)oxan-3-yl] hydrogen phosphate" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 05E "Create component" 2022-01-19 PDBJ 05E "Modify coordinates" 2022-04-15 PDBJ 05E "Modify name" 2022-04-15 PDBJ 05E "Initial release" 2022-04-27 RCSB ##