data_05J # _chem_comp.id 05J _chem_comp.name "1-[(7R)-7-ethyl-7-hydroxy-6,7-dihydro-5H-cyclopenta[b]pyridin-2-yl]-6-[4-(4-methylpiperazin-1-yl)anilino]-2-(prop-2-en-1-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C29 H34 N8 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-06-02 _chem_comp.pdbx_modified_date 2022-04-07 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 526.633 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 05J _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7N3U _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 05J N1 N1 N 0 1 N N N 6.143 -13.218 -23.990 10.036 0.535 -0.451 N1 05J 1 05J C5 C1 C 0 1 N N N 7.419 -11.727 -22.477 8.045 1.023 0.887 C5 05J 2 05J C6 C2 C 0 1 N N N 6.797 -11.892 -23.875 9.527 0.642 0.924 C6 05J 3 05J C7 C3 C 0 1 N N N 5.412 -13.367 -25.261 11.476 0.244 -0.457 C7 05J 4 05J C8 C4 C 0 1 Y N N 9.168 -12.639 -21.047 5.927 0.284 0.136 C8 05J 5 05J C10 C5 C 0 1 Y N N 10.728 -11.309 -19.739 3.692 -0.289 -0.516 C10 05J 6 05J C13 C6 C 0 1 Y N N 9.185 -13.590 -20.024 5.447 1.400 0.810 C13 05J 7 05J C15 C7 C 0 1 Y N N 12.622 -11.405 -17.322 0.928 0.066 0.261 C15 05J 8 05J C17 C8 C 0 1 Y N N 14.315 -10.117 -18.198 -1.265 -0.629 0.225 C17 05J 9 05J C26 C9 C 0 1 N N N 18.195 -9.228 -19.496 -4.882 -2.727 -1.157 C26 05J 10 05J C28 C10 C 0 1 Y N N 14.653 -9.048 -20.342 -3.461 0.440 -0.056 C28 05J 11 05J C2 C11 C 0 1 N N N 7.125 -14.292 -23.802 9.290 -0.481 -1.208 C2 05J 12 05J C3 C12 C 0 1 N N N 7.799 -14.144 -22.428 7.808 -0.100 -1.244 C3 05J 13 05J N4 N2 N 0 1 N N N 8.404 -12.803 -22.232 7.299 0.008 0.130 N4 05J 14 05J C9 C13 C 0 1 Y N N 9.961 -11.500 -20.879 5.046 -0.559 -0.526 C9 05J 15 05J C11 C14 C 0 1 Y N N 10.746 -12.270 -18.726 3.211 0.826 0.158 C11 05J 16 05J C12 C15 C 0 1 Y N N 9.956 -13.405 -18.889 4.093 1.670 0.821 C12 05J 17 05J N14 N3 N 0 1 N N N 11.481 -12.161 -17.519 1.838 1.100 0.169 N14 05J 18 05J N16 N4 N 0 1 Y N N 13.211 -10.824 -18.352 -0.365 0.339 0.147 N16 05J 19 05J C18 C16 C 0 1 Y N N 14.842 -9.928 -16.896 -0.820 -1.954 0.430 C18 05J 20 05J C19 C17 C 0 1 Y N N 14.218 -10.582 -15.827 0.546 -2.192 0.548 C19 05J 21 05J N20 N5 N 0 1 Y N N 13.114 -11.288 -16.079 1.379 -1.168 0.453 N20 05J 22 05J N21 N6 N 0 1 N N N 15.076 -9.392 -19.070 -2.639 -0.666 0.144 N21 05J 23 05J N22 N7 N 0 1 N N N 16.176 -8.876 -18.396 -3.083 -1.984 0.292 N22 05J 24 05J C23 C18 C 0 1 N N N 16.058 -9.122 -17.070 -2.022 -2.797 0.472 C23 05J 25 05J O24 O1 O 0 1 N N N 16.868 -8.811 -16.209 -2.053 -4.003 0.632 O24 05J 26 05J C25 C19 C 0 1 N N N 17.287 -8.148 -18.982 -4.483 -2.414 0.262 C25 05J 27 05J C27 C20 C 0 1 N N N 18.944 -9.932 -18.680 -5.386 -3.900 -1.452 C27 05J 28 05J C29 C21 C 0 1 Y N N 13.909 -9.897 -21.169 -2.893 1.686 -0.297 C29 05J 29 05J C30 C22 C 0 1 Y N N 13.504 -9.416 -22.403 -3.724 2.774 -0.493 C30 05J 30 05J C31 C23 C 0 1 Y N N 13.826 -8.110 -22.758 -5.099 2.580 -0.441 C31 05J 31 05J C32 C24 C 0 1 Y N N 14.544 -7.332 -21.879 -5.598 1.316 -0.197 C32 05J 32 05J N33 N8 N 0 1 Y N N 14.915 -7.817 -20.718 -4.775 0.295 -0.019 N33 05J 33 05J C34 C25 C 0 1 N N N 13.526 -7.328 -24.012 -6.238 3.560 -0.614 C34 05J 34 05J C35 C26 C 0 1 N N N 14.067 -5.895 -23.794 -7.482 2.688 -0.883 C35 05J 35 05J C36 C27 C 0 1 N N R 14.806 -5.955 -22.438 -7.112 1.361 -0.188 C36 05J 36 05J C37 C28 C 0 1 N N N 16.314 -5.764 -22.610 -7.635 1.351 1.250 C37 05J 37 05J C38 C29 C 0 1 N N N 16.644 -4.293 -22.893 -7.152 0.084 1.959 C38 05J 38 05J O39 O2 O 0 1 N N N 14.298 -4.984 -21.528 -7.645 0.254 -0.918 O39 05J 39 05J H2 H2 H 0 1 N N N 7.923 -10.751 -22.415 7.657 1.075 1.905 H2 05J 40 05J H3 H3 H 0 1 N N N 6.626 -11.779 -21.717 7.930 1.993 0.405 H3 05J 41 05J H4 H4 H 0 1 N N N 7.587 -11.809 -24.636 9.644 -0.316 1.431 H4 05J 42 05J H5 H5 H 0 1 N N N 6.048 -11.102 -24.035 10.086 1.408 1.460 H5 05J 43 05J H6 H6 H 0 1 N N N 4.945 -14.362 -25.302 11.659 -0.699 0.058 H6 05J 44 05J H7 H7 H 0 1 N N N 4.633 -12.594 -25.329 11.827 0.170 -1.486 H7 05J 45 05J H8 H8 H 0 1 N N N 6.112 -13.256 -26.102 12.011 1.046 0.052 H8 05J 46 05J H9 H9 H 0 1 N N N 11.316 -10.409 -19.634 3.006 -0.945 -1.031 H9 05J 47 05J H10 H10 H 0 1 N N N 8.587 -14.484 -20.120 6.133 2.056 1.326 H10 05J 48 05J H11 H11 H 0 1 N N N 18.232 -9.429 -20.556 -4.753 -1.985 -1.931 H11 05J 49 05J H12 H12 H 0 1 N N N 6.617 -15.266 -23.857 9.678 -0.533 -2.225 H12 05J 50 05J H13 H13 H 0 1 N N N 7.888 -14.232 -24.592 9.405 -1.451 -0.725 H13 05J 51 05J H14 H14 H 0 1 N N N 7.044 -14.308 -21.645 7.692 0.858 -1.751 H14 05J 52 05J H15 H15 H 0 1 N N N 8.590 -14.904 -22.339 7.249 -0.866 -1.781 H15 05J 53 05J H16 H16 H 0 1 N N N 9.977 -10.750 -21.656 5.419 -1.427 -1.051 H16 05J 54 05J H17 H17 H 0 1 N N N 9.944 -14.157 -18.114 3.720 2.537 1.345 H17 05J 55 05J H18 H18 H 0 1 N N N 11.142 -12.681 -16.735 1.526 2.017 0.112 H18 05J 56 05J H19 H19 H 0 1 N N N 14.619 -10.517 -14.826 0.920 -3.193 0.705 H19 05J 57 05J H20 H20 H 0 1 N N N 17.797 -7.536 -18.224 -5.116 -1.616 0.650 H20 05J 58 05J H21 H21 H 0 1 N N N 16.942 -7.503 -19.803 -4.603 -3.305 0.878 H21 05J 59 05J H22 H22 H 0 1 N N N 19.590 -10.704 -19.071 -5.672 -4.124 -2.469 H22 05J 60 05J H23 H23 H 0 1 N N N 18.914 -9.739 -17.618 -5.516 -4.642 -0.679 H23 05J 61 05J H24 H24 H 0 1 N N N 13.658 -10.899 -20.854 -1.819 1.803 -0.330 H24 05J 62 05J H25 H25 H 0 1 N N N 12.946 -10.046 -23.080 -3.313 3.755 -0.682 H25 05J 63 05J H26 H26 H 0 1 N N N 12.441 -7.299 -24.188 -6.375 4.145 0.295 H26 05J 64 05J H27 H27 H 0 1 N N N 14.760 -5.615 -24.601 -8.370 3.129 -0.429 H27 05J 65 05J H28 H28 H 0 1 N N N 16.663 -6.381 -23.451 -7.261 2.228 1.778 H28 05J 66 05J H29 H29 H 0 1 N N N 16.825 -6.078 -21.688 -8.725 1.369 1.241 H29 05J 67 05J H30 H30 H 0 1 N N N 17.731 -4.177 -23.013 -7.524 0.077 2.984 H30 05J 68 05J H31 H31 H 0 1 N N N 16.137 -3.975 -23.816 -7.525 -0.793 1.431 H31 05J 69 05J H32 H32 H 0 1 N N N 16.300 -3.672 -22.053 -6.062 0.066 1.969 H32 05J 70 05J H33 H33 H 0 1 N N N 14.769 -5.043 -20.705 -7.444 -0.608 -0.528 H33 05J 71 05J H1 H1 H 0 1 N N N 14.025 -7.793 -24.875 -6.046 4.218 -1.462 H1 05J 72 05J H34 H34 H 0 1 N N N 13.240 -5.171 -23.753 -7.627 2.538 -1.953 H34 05J 73 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 05J C7 N1 SING N N 1 05J C34 C35 SING N N 2 05J C34 C31 SING N N 3 05J N1 C6 SING N N 4 05J N1 C2 SING N N 5 05J C6 C5 SING N N 6 05J C2 C3 SING N N 7 05J C35 C36 SING N N 8 05J C38 C37 SING N N 9 05J C31 C30 DOUB Y N 10 05J C31 C32 SING Y N 11 05J C37 C36 SING N N 12 05J C5 N4 SING N N 13 05J C36 C32 SING N N 14 05J C36 O39 SING N N 15 05J C3 N4 SING N N 16 05J C30 C29 SING Y N 17 05J N4 C8 SING N N 18 05J C32 N33 DOUB Y N 19 05J C29 C28 DOUB Y N 20 05J C8 C9 DOUB Y N 21 05J C8 C13 SING Y N 22 05J C9 C10 SING Y N 23 05J N33 C28 SING Y N 24 05J C28 N21 SING N N 25 05J C13 C12 DOUB Y N 26 05J C10 C11 DOUB Y N 27 05J C26 C25 SING N N 28 05J C26 C27 DOUB N N 29 05J N21 N22 SING N N 30 05J N21 C17 SING N N 31 05J C25 N22 SING N N 32 05J C12 C11 SING Y N 33 05J C11 N14 SING N N 34 05J N22 C23 SING N N 35 05J N16 C17 DOUB Y N 36 05J N16 C15 SING Y N 37 05J C17 C18 SING Y N 38 05J N14 C15 SING N N 39 05J C15 N20 DOUB Y N 40 05J C23 C18 SING N N 41 05J C23 O24 DOUB N N 42 05J C18 C19 DOUB Y N 43 05J N20 C19 SING Y N 44 05J C5 H2 SING N N 45 05J C5 H3 SING N N 46 05J C6 H4 SING N N 47 05J C6 H5 SING N N 48 05J C7 H6 SING N N 49 05J C7 H7 SING N N 50 05J C7 H8 SING N N 51 05J C10 H9 SING N N 52 05J C13 H10 SING N N 53 05J C26 H11 SING N N 54 05J C2 H12 SING N N 55 05J C2 H13 SING N N 56 05J C3 H14 SING N N 57 05J C3 H15 SING N N 58 05J C9 H16 SING N N 59 05J C12 H17 SING N N 60 05J N14 H18 SING N N 61 05J C19 H19 SING N N 62 05J C25 H20 SING N N 63 05J C25 H21 SING N N 64 05J C27 H22 SING N N 65 05J C27 H23 SING N N 66 05J C29 H24 SING N N 67 05J C30 H25 SING N N 68 05J C34 H26 SING N N 69 05J C35 H27 SING N N 70 05J C37 H28 SING N N 71 05J C37 H29 SING N N 72 05J C38 H30 SING N N 73 05J C38 H31 SING N N 74 05J C38 H32 SING N N 75 05J O39 H33 SING N N 76 05J C34 H1 SING N N 77 05J C35 H34 SING N N 78 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 05J SMILES ACDLabs 12.01 "CN1CCN(CC1)c1ccc(cc1)Nc1ncc2C(=O)N(CC=C)N(c2n1)c1ccc2CCC(O)(CC)c2n1" 05J InChI InChI 1.03 "InChI=1S/C29H34N8O2/c1-4-14-36-27(38)23-19-30-28(31-21-7-9-22(10-8-21)35-17-15-34(3)16-18-35)33-26(23)37(36)24-11-6-20-12-13-29(39,5-2)25(20)32-24/h4,6-11,19,39H,1,5,12-18H2,2-3H3,(H,30,31,33)/t29-/m1/s1" 05J InChIKey InChI 1.03 OXTSYWDBUVRXFF-GDLZYMKVSA-N 05J SMILES_CANONICAL CACTVS 3.385 "CC[C@@]1(O)CCc2ccc(nc12)N3N(CC=C)C(=O)c4cnc(Nc5ccc(cc5)N6CCN(C)CC6)nc34" 05J SMILES CACTVS 3.385 "CC[C]1(O)CCc2ccc(nc12)N3N(CC=C)C(=O)c4cnc(Nc5ccc(cc5)N6CCN(C)CC6)nc34" 05J SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC[C@]1(CCc2c1nc(cc2)N3c4c(cnc(n4)Nc5ccc(cc5)N6CCN(CC6)C)C(=O)N3CC=C)O" 05J SMILES "OpenEye OEToolkits" 2.0.7 "CCC1(CCc2c1nc(cc2)N3c4c(cnc(n4)Nc5ccc(cc5)N6CCN(CC6)C)C(=O)N3CC=C)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 05J "SYSTEMATIC NAME" ACDLabs 12.01 "1-[(7R)-7-ethyl-7-hydroxy-6,7-dihydro-5H-cyclopenta[b]pyridin-2-yl]-6-[4-(4-methylpiperazin-1-yl)anilino]-2-(prop-2-en-1-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one" 05J "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "1-[(7~{R})-7-ethyl-7-oxidanyl-5,6-dihydrocyclopenta[b]pyridin-2-yl]-6-[[4-(4-methylpiperazin-1-yl)phenyl]amino]-2-prop-2-enyl-pyrazolo[3,4-d]pyrimidin-3-one" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 05J "Create component" 2021-06-02 RCSB 05J "Initial release" 2021-09-01 RCSB ##