data_06E # _chem_comp.id 06E _chem_comp.name "6-[(11-bromanyl-6-oxidanylidene-8-thia-3,5,13-triazatricyclo[7.4.0.0^{2,7}]trideca-1(9),2(7),3,10,12-pentaen-4-yl)methylamino]hexanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H17 Br N4 O3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-05-28 _chem_comp.pdbx_modified_date 2023-11-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 425.300 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 06E _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7OOX _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 06E C27 C1 C 0 1 N N N Y N Y 62.682 54.137 7.560 8.757 2.172 0.001 C27 06E 1 06E O1 O1 O 0 1 N N N Y N Y 63.580 53.396 7.131 8.033 3.139 0.001 O1 06E 2 06E C28 C2 C 0 1 N N N N N N 62.713 54.683 8.970 8.165 0.786 -0.004 C28 06E 3 06E C29 C3 C 0 1 N N N N N N 63.204 53.685 10.003 6.638 0.884 -0.001 C29 06E 4 06E C30 C4 C 0 1 N N N N N N 62.156 52.654 10.388 6.037 -0.523 -0.005 C30 06E 5 06E C31 C5 C 0 1 N N N N N N 62.739 51.363 10.889 4.510 -0.425 -0.002 C31 06E 6 06E C32 C6 C 0 1 N N N N N N 63.200 51.429 12.315 3.909 -1.832 -0.007 C32 06E 7 06E N17 N1 N 0 1 N N N N N N 63.834 50.173 12.748 2.443 -1.738 -0.004 N17 06E 8 06E C33 C7 C 0 1 N N N N N N 65.011 50.391 13.510 1.830 -3.073 -0.008 C33 06E 9 06E C34 C8 C 0 1 N N N N N N 65.212 49.307 14.545 0.329 -2.936 -0.005 C34 06E 10 06E N19 N2 N 0 1 N N N N N N 66.076 48.355 14.259 -0.195 -1.749 -0.005 N19 06E 11 06E C36 C9 C 0 1 Y N N N N N 66.502 47.643 15.325 -1.543 -1.560 -0.002 C36 06E 12 06E C42 C10 C 0 1 Y N N N N N 67.414 46.605 15.155 -2.281 -0.290 -0.002 C42 06E 13 06E N20 N3 N 0 1 Y N N N N N 67.943 46.223 13.980 -1.778 0.957 -0.004 N20 06E 14 06E C41 C11 C 0 1 Y N N N N N 68.812 45.203 13.998 -2.543 2.018 -0.004 C41 06E 15 06E C40 C12 C 0 1 Y N N N N N 69.180 44.561 15.172 -3.928 1.906 -0.001 C40 06E 16 06E BR BR1 BR 0 0 N N N N N N 70.401 43.118 15.127 -5.015 3.454 -0.000 BR 06E 17 06E C39 C13 C 0 1 Y N N N N N 68.642 44.945 16.379 -4.501 0.651 0.001 C39 06E 18 06E C38 C14 C 0 1 Y N N N N N 67.732 45.980 16.367 -3.659 -0.473 0.000 C38 06E 19 06E S S1 S 0 1 Y N N N N N 66.890 46.674 17.693 -4.057 -2.183 0.002 S 06E 20 06E C37 C15 C 0 1 Y N N N N N 66.118 47.799 16.638 -2.369 -2.663 -0.000 C37 06E 21 06E C35 C16 C 0 1 N N N N N N 65.133 48.815 16.893 -1.779 -3.959 0.000 C35 06E 22 06E O O2 O 0 1 N N N N N N 64.698 49.091 17.993 -2.477 -4.959 0.002 O 06E 23 06E N18 N4 N 0 1 N N N N N N 64.710 49.516 15.787 -0.435 -4.059 -0.008 N18 06E 24 06E H2 H2 H 0 1 N N N N N N 63.380 55.558 8.989 8.493 0.254 -0.896 H2 06E 25 06E H3 H3 H 0 1 N N N N N N 61.694 54.993 9.244 8.496 0.247 0.883 H3 06E 26 06E H4 H4 H 0 1 N N N N N N 64.078 53.158 9.592 6.310 1.417 0.892 H4 06E 27 06E H5 H5 H 0 1 N N N N N N 63.501 54.236 10.908 6.307 1.424 -0.888 H5 06E 28 06E H6 H6 H 0 1 N N N N N N 61.523 53.080 11.180 6.365 -1.055 -0.898 H6 06E 29 06E H7 H7 H 0 1 N N N N N N 61.540 52.437 9.503 6.368 -1.062 0.882 H7 06E 30 06E H8 H8 H 0 1 N N N N N N 61.972 50.579 10.807 4.182 0.108 0.890 H8 06E 31 06E H9 H9 H 0 1 N N N N N N 63.600 51.101 10.256 4.179 0.115 -0.890 H9 06E 32 06E H10 H10 H 0 1 N N N N N N 63.928 52.247 12.415 4.237 -2.364 -0.900 H10 06E 33 06E H11 H11 H 0 1 N N N N N N 62.332 51.629 12.960 4.240 -2.371 0.880 H11 06E 34 06E H12 H12 H 0 1 N N N N N N 63.181 49.660 13.306 2.117 -1.193 0.780 H12 06E 35 06E H14 H14 H 0 1 N N N N N N 65.878 50.403 12.833 2.143 -3.614 -0.901 H14 06E 36 06E H15 H15 H 0 1 N N N N N N 64.931 51.362 14.021 2.146 -3.621 0.879 H15 06E 37 06E H16 H16 H 0 1 N N N N N N 69.241 44.869 13.065 -2.091 2.999 -0.005 H16 06E 38 06E H17 H17 H 0 1 N N N N N N 68.922 44.455 17.300 -5.575 0.535 0.004 H17 06E 39 06E H18 H18 H 0 1 N N N N N N 64.000 50.211 15.905 -0.013 -4.932 -0.012 H18 06E 40 06E OXT OXY O 0 1 N Y N Y N Y 61.621 54.512 6.822 10.090 2.332 -0.001 OXT 06E 41 06E H1 H1 H 0 1 N Y N Y N Y 61.684 54.125 5.957 10.423 3.240 0.002 H1 06E 42 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 06E O1 C27 DOUB N N 1 06E C27 C28 SING N N 2 06E C28 C29 SING N N 3 06E C29 C30 SING N N 4 06E C30 C31 SING N N 5 06E C31 C32 SING N N 6 06E C32 N17 SING N N 7 06E N17 C33 SING N N 8 06E C33 C34 SING N N 9 06E N20 C41 DOUB Y N 10 06E N20 C42 SING Y N 11 06E C41 C40 SING Y N 12 06E N19 C34 DOUB N N 13 06E N19 C36 SING N N 14 06E C34 N18 SING N N 15 06E BR C40 SING N N 16 06E C42 C36 SING Y N 17 06E C42 C38 DOUB Y N 18 06E C40 C39 DOUB Y N 19 06E C36 C37 DOUB Y N 20 06E N18 C35 SING N N 21 06E C38 C39 SING Y N 22 06E C38 S SING Y N 23 06E C37 C35 SING N N 24 06E C37 S SING Y N 25 06E C35 O DOUB N N 26 06E C28 H2 SING N N 27 06E C28 H3 SING N N 28 06E C29 H4 SING N N 29 06E C29 H5 SING N N 30 06E C30 H6 SING N N 31 06E C30 H7 SING N N 32 06E C31 H8 SING N N 33 06E C31 H9 SING N N 34 06E C32 H10 SING N N 35 06E C32 H11 SING N N 36 06E N17 H12 SING N N 37 06E C33 H14 SING N N 38 06E C33 H15 SING N N 39 06E C41 H16 SING N N 40 06E C39 H17 SING N N 41 06E N18 H18 SING N N 42 06E C27 OXT SING N N 43 06E OXT H1 SING N N 44 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 06E InChI InChI 1.03 "InChI=1S/C16H17BrN4O3S/c17-9-6-10-13(19-7-9)14-15(25-10)16(24)21-11(20-14)8-18-5-3-1-2-4-12(22)23/h6-7,18H,1-5,8H2,(H,22,23)(H,20,21,24)" 06E InChIKey InChI 1.03 SJECIJXSSTYSID-UHFFFAOYSA-N 06E SMILES_CANONICAL CACTVS 3.385 "OC(=O)CCCCCNCC1=Nc2c(sc3cc(Br)cnc23)C(=O)N1" 06E SMILES CACTVS 3.385 "OC(=O)CCCCCNCC1=Nc2c(sc3cc(Br)cnc23)C(=O)N1" 06E SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1c(cnc2c1sc3c2N=C(NC3=O)CNCCCCCC(=O)O)Br" 06E SMILES "OpenEye OEToolkits" 2.0.7 "c1c(cnc2c1sc3c2N=C(NC3=O)CNCCCCCC(=O)O)Br" # _pdbx_chem_comp_identifier.comp_id 06E _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "6-[(11-bromanyl-6-oxidanylidene-8-thia-3,5,13-triazatricyclo[7.4.0.0^{2,7}]trideca-1(9),2(7),3,10,12-pentaen-4-yl)methylamino]hexanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 06E "Create component" 2021-05-28 PDBE 06E "Initial release" 2021-08-04 RCSB 06E "Modify backbone" 2023-11-03 PDBE #