data_07I # _chem_comp.id 07I _chem_comp.name "Spliceostatin E (form I)" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H37 N O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "[(Z,2S)-5-[[(2R,3R,5S,6S)-2,5-dimethyl-6-[(2E,4E)-3-methyl-5-[(2S)-4-methyl-6-oxidanylidene-2,3-dihydropyran-2-yl]penta-2,4-dienyl]oxan-3-yl]amino]-5-oxidanylidene-pent-3-en-2-yl] ethanoate; [(Z,2S)-5-[[(2R,3R,5S,6S)-2,5-dimethyl-6-[(2E,4E)-3-methyl-5-[(2S)-4-methyl-6-oxo-2,3-dihydropyran-2-yl]penta-2,4-dienyl]oxan-3-yl]amino]-5-oxopent-3-en-2-yl] acetate; 90123658" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-06-01 _chem_comp.pdbx_modified_date 2021-07-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 459.575 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 07I _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7OPI _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 07I C1 C1 C 0 1 N N S -16.563 42.949 -35.764 1.509 0.767 -0.838 C1 07I 1 07I O1 O1 O 0 1 N N N -12.071 49.793 -41.661 -8.136 -2.513 -0.384 O1 07I 2 07I C2 C2 C 0 1 N N N -16.914 42.117 -34.533 2.397 -0.162 -1.671 C2 07I 3 07I O2 O2 O 0 1 N N N -13.994 48.928 -41.070 -6.870 -0.697 -0.019 O2 07I 4 07I C3 C3 C 0 1 N N R -17.120 42.929 -33.247 2.489 -1.523 -0.973 C3 07I 5 07I C5 C4 C 0 1 N N S -17.412 44.212 -35.736 0.136 0.116 -0.652 C5 07I 6 07I C6 C5 C 0 1 N N N -17.617 44.857 -37.108 -0.738 1.011 0.230 C6 07I 7 07I C7 C6 C 0 1 N N N -16.718 46.017 -37.418 -2.127 0.432 0.312 C7 07I 8 07I C8 C7 C 0 1 N N N -16.712 46.443 -38.684 -3.175 1.168 -0.040 C8 07I 9 07I C9 C8 C 0 1 N N N -17.518 45.754 -39.750 -2.993 2.624 -0.383 C9 07I 10 07I C10 C9 C 0 1 N N N -15.978 47.633 -39.073 -4.515 0.562 -0.095 C10 07I 11 07I N N1 N 0 1 N N N -16.079 42.624 -32.272 3.133 -1.361 0.333 N 07I 12 07I C C10 C 0 1 N N N -15.066 43.244 -35.829 2.154 1.001 0.530 C 07I 13 07I O O3 O 0 1 N N N -17.008 45.057 -34.651 0.296 -1.159 -0.026 O 07I 14 07I C11 C11 C 0 1 N N N -16.080 48.040 -40.326 -5.563 1.298 -0.448 C11 07I 15 07I C12 C12 C 0 1 N N S -15.420 49.245 -40.918 -6.935 0.677 -0.504 C12 07I 16 07I C13 C13 C 0 1 N N N -16.084 49.429 -42.284 -7.894 1.469 0.386 C13 07I 17 07I C14 C14 C 0 1 N N N -15.216 50.210 -43.230 -9.182 0.714 0.570 C14 07I 18 07I C15 C15 C 0 1 N N N -13.908 50.320 -43.010 -9.257 -0.597 0.377 C15 07I 19 07I C16 C16 C 0 1 N N N -13.248 49.688 -41.902 -8.060 -1.350 -0.038 C16 07I 20 07I C17 C17 C 0 1 N N N -15.904 50.860 -44.395 -10.419 1.467 0.986 C17 07I 21 07I C18 C18 C 0 1 N N N -16.613 45.252 -32.320 1.157 -3.417 -0.032 C18 07I 22 07I C19 C19 C 0 1 N N N -15.949 41.413 -31.707 4.468 -1.195 0.409 C19 07I 23 07I C20 C20 C 0 1 N N N -14.766 41.260 -30.829 5.115 -1.033 1.721 C20 07I 24 07I C21 C21 C 0 1 N N N -14.395 40.173 -30.169 6.408 -0.729 1.792 C21 07I 25 07I C22 C22 C 0 1 N N S -15.088 38.845 -30.203 7.144 -0.275 0.558 C22 07I 26 07I C23 C23 C 0 1 N N N -15.794 38.470 -28.920 8.158 -1.344 0.146 C23 07I 27 07I C24 C24 C 0 1 N N N -13.588 37.671 -31.685 8.009 1.817 -0.187 C24 07I 28 07I C25 C25 C 0 1 N N N -12.591 36.566 -31.754 8.721 3.128 0.029 C25 07I 29 07I C4 C26 C 0 1 N N R -17.319 44.442 -33.383 1.078 -2.085 -0.782 C4 07I 30 07I O3 O4 O 0 1 N N N -16.771 40.506 -31.906 5.138 -1.178 -0.605 O3 07I 31 07I O4 O5 O 0 1 N N N -14.057 37.821 -30.429 7.838 0.969 0.839 O4 07I 32 07I O5 O6 O 0 1 N N N -13.946 38.349 -32.604 7.593 1.530 -1.284 O5 07I 33 07I H1 H1 H 0 1 N N N -16.837 42.370 -36.658 1.393 1.720 -1.355 H1 07I 34 07I H5 H5 H 0 1 N N N -18.414 43.854 -35.458 -0.340 -0.013 -1.624 H5 07I 35 07I H6 H6 H 0 1 N N N -18.657 45.210 -37.164 -0.308 1.068 1.230 H6 07I 36 07I H7 H7 H 0 1 N N N -17.450 44.085 -37.874 -0.786 2.011 -0.202 H7 07I 37 07I H8 H8 H 0 1 N N N -16.108 46.483 -36.658 -2.270 -0.581 0.658 H8 07I 38 07I H9 H9 H 0 1 N N N -18.019 44.874 -39.320 -2.788 2.724 -1.449 H9 07I 39 07I H10 H10 H 0 1 N N N -18.273 46.449 -40.145 -3.902 3.173 -0.135 H10 07I 40 07I H11 H11 H 0 1 N N N -16.851 45.435 -40.565 -2.157 3.030 0.187 H11 07I 41 07I H12 H12 H 0 1 N N N -15.368 48.169 -38.361 -4.646 -0.482 0.150 H12 07I 42 07I H13 H13 H 0 1 N N N -15.437 43.346 -32.014 2.598 -1.374 1.142 H13 07I 43 07I H14 H14 H 0 1 N N N -14.506 42.298 -35.847 2.002 0.123 1.158 H14 07I 44 07I H15 H15 H 0 1 N N N -14.845 43.818 -36.741 3.222 1.177 0.403 H15 07I 45 07I H16 H16 H 0 1 N N N -14.769 43.829 -34.946 1.696 1.870 1.003 H16 07I 46 07I H17 H17 H 0 1 N N N -16.698 47.447 -40.984 -5.432 2.341 -0.694 H17 07I 47 07I H18 H18 H 0 1 N N N -15.573 50.133 -40.288 -7.297 0.684 -1.533 H18 07I 48 07I H19 H19 H 0 1 N N N -17.034 49.966 -42.148 -7.430 1.634 1.359 H19 07I 49 07I H20 H20 H 0 1 N N N -16.282 48.438 -42.719 -8.107 2.431 -0.079 H20 07I 50 07I H21 H21 H 0 1 N N N -13.317 50.910 -43.695 -10.196 -1.111 0.524 H21 07I 51 07I H22 H22 H 0 1 N N N -16.979 50.627 -44.364 -11.255 0.772 1.073 H22 07I 52 07I H23 H23 H 0 1 N N N -15.764 51.950 -44.342 -10.246 1.949 1.948 H23 07I 53 07I H24 H24 H 0 1 N N N -15.474 50.480 -45.333 -10.653 2.224 0.237 H24 07I 54 07I H25 H25 H 0 1 N N N -16.821 44.820 -31.330 0.152 -3.817 0.105 H25 07I 55 07I H26 H26 H 0 1 N N N -15.529 45.236 -32.507 1.754 -4.123 -0.609 H26 07I 56 07I H27 H27 H 0 1 N N N -16.975 46.290 -32.350 1.621 -3.259 0.941 H27 07I 57 07I H28 H28 H 0 1 N N N -14.137 42.130 -30.714 4.540 -1.160 2.626 H28 07I 58 07I H29 H29 H 0 1 N N N -13.513 40.251 -29.550 6.930 -0.808 2.734 H29 07I 59 07I H30 H30 H 0 1 N N N -15.812 38.832 -31.031 6.432 -0.118 -0.253 H30 07I 60 07I H31 H31 H 0 1 N N N -16.580 39.209 -28.704 7.637 -2.277 -0.065 H31 07I 61 07I H32 H32 H 0 1 N N N -16.247 37.474 -29.029 8.690 -1.015 -0.746 H32 07I 62 07I H33 H33 H 0 1 N N N -15.068 38.454 -28.093 8.870 -1.500 0.957 H33 07I 63 07I H34 H34 H 0 1 N N N -12.227 36.463 -32.787 9.022 3.210 1.073 H34 07I 64 07I H35 H35 H 0 1 N N N -11.745 36.793 -31.089 9.605 3.170 -0.608 H35 07I 65 07I H36 H36 H 0 1 N N N -13.064 35.625 -31.437 8.052 3.951 -0.222 H36 07I 66 07I H2 H2 H 0 1 N N N -17.844 41.568 -34.744 1.963 -0.289 -2.662 H2 07I 67 07I H3 H3 H 0 1 N N N -16.097 41.401 -34.359 3.394 0.270 -1.760 H3 07I 68 07I H4 H4 H 0 1 N N N -18.059 42.552 -32.816 3.075 -2.207 -1.587 H4 07I 69 07I H37 H37 H 0 1 N N N -18.393 44.609 -33.215 0.614 -2.243 -1.756 H37 07I 70 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 07I C17 C14 SING N N 1 07I C14 C15 DOUB N N 2 07I C14 C13 SING N N 3 07I C15 C16 SING N N 4 07I C13 C12 SING N N 5 07I C16 O1 DOUB N N 6 07I C16 O2 SING N N 7 07I O2 C12 SING N N 8 07I C12 C11 SING N N 9 07I C11 C10 DOUB N E 10 07I C9 C8 SING N N 11 07I C10 C8 SING N N 12 07I C8 C7 DOUB N E 13 07I C7 C6 SING N N 14 07I C6 C5 SING N N 15 07I C C1 SING N N 16 07I C1 C5 SING N N 17 07I C1 C2 SING N N 18 07I C5 O SING N N 19 07I O C4 SING N N 20 07I C2 C3 SING N N 21 07I C4 C3 SING N N 22 07I C4 C18 SING N N 23 07I C3 N SING N N 24 07I O5 C24 DOUB N N 25 07I N C19 SING N N 26 07I O3 C19 DOUB N N 27 07I C25 C24 SING N N 28 07I C19 C20 SING N N 29 07I C24 O4 SING N N 30 07I C20 C21 DOUB N Z 31 07I O4 C22 SING N N 32 07I C22 C21 SING N N 33 07I C22 C23 SING N N 34 07I C1 H1 SING N N 35 07I C5 H5 SING N N 36 07I C6 H6 SING N N 37 07I C6 H7 SING N N 38 07I C7 H8 SING N N 39 07I C9 H9 SING N N 40 07I C9 H10 SING N N 41 07I C9 H11 SING N N 42 07I C10 H12 SING N N 43 07I N H13 SING N N 44 07I C H14 SING N N 45 07I C H15 SING N N 46 07I C H16 SING N N 47 07I C11 H17 SING N N 48 07I C12 H18 SING N N 49 07I C13 H19 SING N N 50 07I C13 H20 SING N N 51 07I C15 H21 SING N N 52 07I C17 H22 SING N N 53 07I C17 H23 SING N N 54 07I C17 H24 SING N N 55 07I C18 H25 SING N N 56 07I C18 H26 SING N N 57 07I C18 H27 SING N N 58 07I C20 H28 SING N N 59 07I C21 H29 SING N N 60 07I C22 H30 SING N N 61 07I C23 H31 SING N N 62 07I C23 H32 SING N N 63 07I C23 H33 SING N N 64 07I C25 H34 SING N N 65 07I C25 H35 SING N N 66 07I C25 H36 SING N N 67 07I C2 H2 SING N N 68 07I C2 H3 SING N N 69 07I C3 H4 SING N N 70 07I C4 H37 SING N N 71 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 07I InChI InChI 1.03 "InChI=1S/C26H37NO6/c1-16(7-10-22-13-17(2)14-26(30)33-22)8-11-24-18(3)15-23(20(5)32-24)27-25(29)12-9-19(4)31-21(6)28/h7-10,12,14,18-20,22-24H,11,13,15H2,1-6H3,(H,27,29)/b10-7+,12-9-,16-8+/t18-,19-,20+,22+,23+,24-/m0/s1" 07I InChIKey InChI 1.03 CDYGVGCTHMNLJY-FLMQFJOVSA-N 07I SMILES_CANONICAL CACTVS 3.385 "C[C@H]1C[C@@H](NC(=O)\C=C/[C@H](C)OC(C)=O)[C@@H](C)O[C@H]1C/C=C(C)/C=C/[C@@H]2CC(=CC(=O)O2)C" 07I SMILES CACTVS 3.385 "C[CH]1C[CH](NC(=O)C=C[CH](C)OC(C)=O)[CH](C)O[CH]1CC=C(C)C=C[CH]2CC(=CC(=O)O2)C" 07I SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H]1C[C@H]([C@H](O[C@H]1C/C=C(\C)/C=C/[C@@H]2CC(=CC(=O)O2)C)C)NC(=O)/C=C\[C@H](C)OC(=O)C" 07I SMILES "OpenEye OEToolkits" 2.0.7 "CC1CC(C(OC1CC=C(C)C=CC2CC(=CC(=O)O2)C)C)NC(=O)C=CC(C)OC(=O)C" # _pdbx_chem_comp_identifier.comp_id 07I _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[(~{Z},2~{S})-5-[[(2~{R},3~{R},5~{S},6~{S})-2,5-dimethyl-6-[(2~{E},4~{E})-3-methyl-5-[(2~{S})-4-methyl-6-oxidanylidene-2,3-dihydropyran-2-yl]penta-2,4-dienyl]oxan-3-yl]amino]-5-oxidanylidene-pent-3-en-2-yl] ethanoate" # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 07I "[(Z,2S)-5-[[(2R,3R,5S,6S)-2,5-dimethyl-6-[(2E,4E)-3-methyl-5-[(2S)-4-methyl-6-oxidanylidene-2,3-dihydropyran-2-yl]penta-2,4-dienyl]oxan-3-yl]amino]-5-oxidanylidene-pent-3-en-2-yl] ethanoate" PDB ? 2 07I "[(Z,2S)-5-[[(2R,3R,5S,6S)-2,5-dimethyl-6-[(2E,4E)-3-methyl-5-[(2S)-4-methyl-6-oxo-2,3-dihydropyran-2-yl]penta-2,4-dienyl]oxan-3-yl]amino]-5-oxopent-3-en-2-yl] acetate" PUBCHEM ? 3 07I 90123658 PUBCHEM ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 07I "Create component" 2021-06-01 PDBE 07I "Initial release" 2021-08-04 RCSB ##