data_08O # _chem_comp.id 08O _chem_comp.name "(Z)-docos-13-enoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H42 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-01-19 _chem_comp.pdbx_modified_date 2023-01-20 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 338.568 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 08O _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7WKG _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 08O O1 O1 O 0 1 N N N 4.974 -16.381 -0.944 -11.796 -2.229 -0.013 O1 08O 1 08O C1 C1 C 0 1 N N N 5.987 -16.644 -1.680 -10.788 -1.372 0.210 C1 08O 2 08O O2 O2 O 0 1 N N N 7.020 -15.977 -1.655 -11.001 -0.320 0.765 O2 08O 3 08O C2 C2 C 0 1 N N N 5.850 -17.737 -2.716 -9.390 -1.722 -0.231 C2 08O 4 08O C3 C3 C 0 1 N N N 7.016 -18.146 -3.512 -8.438 -0.583 0.141 C3 08O 5 08O C4 C4 C 0 1 N N N 6.847 -19.279 -4.439 -7.019 -0.938 -0.307 C4 08O 6 08O C5 C5 C 0 1 N N N 8.201 -19.907 -4.991 -6.067 0.201 0.065 C5 08O 7 08O C6 C6 C 0 1 N N N 7.959 -20.867 -6.058 -4.648 -0.154 -0.383 C6 08O 8 08O C7 C7 C 0 1 N N N 7.101 -22.047 -5.722 -3.696 0.984 -0.011 C7 08O 9 08O C8 C8 C 0 1 N N N 7.677 -22.946 -4.567 -2.277 0.630 -0.458 C8 08O 10 08O C9 C9 C 0 1 N N N 6.584 -23.854 -4.126 -1.325 1.768 -0.086 C9 08O 11 08O C10 C10 C 0 1 N N N 7.073 -24.918 -3.173 0.095 1.413 -0.534 C10 08O 12 08O C11 C11 C 0 1 N N N 8.491 -25.100 -2.680 1.046 2.552 -0.162 C11 08O 13 08O C12 C12 C 0 1 N N N 8.443 -26.322 -1.766 2.466 2.197 -0.610 C12 08O 14 08O C13 C13 C 0 1 N N N 9.232 -26.513 -0.489 3.403 3.319 -0.244 C13 08O 15 08O C14 C14 C 0 1 N N N 8.715 -26.335 0.901 4.494 3.065 0.437 C14 08O 16 08O C15 C15 C 0 1 N N N 7.227 -26.249 0.987 4.899 1.639 0.706 C15 08O 17 08O C16 C16 C 0 1 N N N 6.976 -24.892 1.577 6.338 1.420 0.235 C16 08O 18 08O C17 C17 C 0 1 N N N 7.229 -23.855 0.479 6.749 -0.028 0.508 C17 08O 19 08O C18 C18 C 0 1 N N N 6.730 -22.619 1.197 8.188 -0.248 0.037 C18 08O 20 08O C19 C19 C 0 1 N N N 6.858 -21.373 0.254 8.599 -1.696 0.310 C19 08O 21 08O C20 C20 C 0 1 N N N 8.352 -20.990 -0.117 10.038 -1.915 -0.161 C20 08O 22 08O C21 C21 C 0 1 N N N 9.296 -20.706 1.035 10.450 -3.363 0.113 C21 08O 23 08O C22 C22 C 0 1 N N N 10.696 -20.426 0.628 11.889 -3.582 -0.359 C22 08O 24 08O H1 H1 H 0 1 N N N 5.161 -15.619 -0.408 -12.675 -1.961 0.287 H1 08O 25 08O H2 H2 H 0 1 N N N 5.080 -17.405 -3.428 -9.071 -2.638 0.265 H2 08O 26 08O H3 H3 H 0 1 N N N 7.817 -18.414 -2.808 -8.757 0.334 -0.355 H3 08O 27 08O H4 H4 H 0 1 N N N 6.257 -18.930 -5.300 -6.700 -1.855 0.189 H4 08O 28 08O H5 H5 H 0 1 N N N 6.294 -20.071 -3.912 -7.005 -1.085 -1.387 H5 08O 29 08O H6 H6 H 0 1 N N N 8.719 -20.416 -4.165 -6.386 1.118 -0.431 H6 08O 30 08O H7 H7 H 0 1 N N N 8.836 -19.097 -5.379 -6.081 0.348 1.145 H7 08O 31 08O H8 H8 H 0 1 N N N 8.936 -21.249 -6.390 -4.329 -1.071 0.113 H8 08O 32 08O H9 H9 H 0 1 N N N 7.475 -20.329 -6.887 -4.634 -0.301 -1.462 H9 08O 33 08O H10 H10 H 0 1 N N N 6.111 -21.679 -5.414 -4.015 1.901 -0.507 H10 08O 34 08O H11 H11 H 0 1 N N N 6.997 -22.667 -6.624 -3.710 1.132 1.069 H11 08O 35 08O H12 H12 H 0 1 N N N 8.529 -23.535 -4.938 -1.958 -0.287 0.037 H12 08O 36 08O H13 H13 H 0 1 N N N 8.005 -22.316 -3.727 -2.263 0.482 -1.538 H13 08O 37 08O H14 H14 H 0 1 N N N 5.809 -23.257 -3.622 -1.644 2.685 -0.582 H14 08O 38 08O H15 H15 H 0 1 N N N 6.152 -24.343 -5.011 -1.339 1.916 0.993 H15 08O 39 08O H16 H16 H 0 1 N N N 6.469 -24.787 -2.263 0.414 0.497 -0.038 H16 08O 40 08O H17 H17 H 0 1 N N N 6.812 -25.873 -3.652 0.109 1.266 -1.614 H17 08O 41 08O H18 H18 H 0 1 N N N 9.173 -25.276 -3.525 0.728 3.469 -0.658 H18 08O 42 08O H19 H19 H 0 1 N N N 8.822 -24.213 -2.121 1.032 2.699 0.918 H19 08O 43 08O H20 H20 H 0 1 N N N 7.388 -26.418 -1.469 2.785 1.280 -0.114 H20 08O 44 08O H21 H21 H 0 1 N N N 8.723 -27.171 -2.407 2.480 2.050 -1.690 H21 08O 45 08O H22 H22 H 0 1 N N N 10.266 -26.806 -0.592 3.176 4.332 -0.542 H22 08O 46 08O H24 H24 H 0 1 N N N 9.359 -26.274 1.766 5.102 3.878 0.804 H24 08O 47 08O H26 H26 H 0 1 N N N 6.772 -26.332 -0.011 4.833 1.438 1.776 H26 08O 48 08O H27 H27 H 0 1 N N N 6.827 -27.039 1.639 4.233 0.964 0.168 H27 08O 49 08O H28 H28 H 0 1 N N N 7.659 -24.718 2.422 6.404 1.620 -0.835 H28 08O 50 08O H29 H29 H 0 1 N N N 5.935 -24.822 1.927 7.003 2.094 0.773 H29 08O 51 08O H30 H30 H 0 1 N N N 6.647 -24.067 -0.430 6.683 -0.229 1.578 H30 08O 52 08O H31 H31 H 0 1 N N N 8.296 -23.779 0.222 6.084 -0.703 -0.030 H31 08O 53 08O H32 H32 H 0 1 N N N 7.331 -22.455 2.104 8.255 -0.047 -1.033 H32 08O 54 08O H33 H33 H 0 1 N N N 5.675 -22.759 1.477 8.854 0.427 0.575 H33 08O 55 08O H34 H34 H 0 1 N N N 6.395 -20.511 0.757 8.533 -1.896 1.380 H34 08O 56 08O H35 H35 H 0 1 N N N 6.315 -21.589 -0.678 7.934 -2.371 -0.228 H35 08O 57 08O H36 H36 H 0 1 N N N 8.775 -21.825 -0.695 10.105 -1.714 -1.230 H36 08O 58 08O H37 H37 H 0 1 N N N 8.317 -20.089 -0.747 10.704 -1.240 0.377 H37 08O 59 08O H38 H38 H 0 1 N N N 8.916 -19.831 1.583 10.384 -3.563 1.182 H38 08O 60 08O H39 H39 H 0 1 N N N 9.300 -21.582 1.700 9.784 -4.038 -0.426 H39 08O 61 08O H40 H40 H 0 1 N N N 11.307 -20.232 1.522 11.955 -3.382 -1.428 H40 08O 62 08O H41 H41 H 0 1 N N N 11.101 -21.295 0.088 12.554 -2.907 0.179 H41 08O 63 08O H42 H42 H 0 1 N N N 10.717 -19.544 -0.029 12.182 -4.614 -0.164 H42 08O 64 08O H43 H43 H 0 1 N N N 5.497 -18.634 -2.186 -9.376 -1.869 -1.311 H43 08O 65 08O H44 H44 H 0 1 N N N 7.328 -17.276 -4.109 -8.452 -0.436 1.221 H44 08O 66 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 08O C6 C7 SING N N 1 08O C6 C5 SING N N 2 08O C7 C8 SING N N 3 08O C5 C4 SING N N 4 08O C8 C9 SING N N 5 08O C4 C3 SING N N 6 08O C9 C10 SING N N 7 08O C3 C2 SING N N 8 08O C10 C11 SING N N 9 08O C2 C1 SING N N 10 08O C11 C12 SING N N 11 08O C12 C13 SING N N 12 08O C1 O2 DOUB N N 13 08O C1 O1 SING N N 14 08O C13 C14 DOUB N Z 15 08O C20 C19 SING N N 16 08O C20 C21 SING N N 17 08O C19 C18 SING N N 18 08O C17 C18 SING N N 19 08O C17 C16 SING N N 20 08O C22 C21 SING N N 21 08O C14 C15 SING N N 22 08O C15 C16 SING N N 23 08O O1 H1 SING N N 24 08O C2 H2 SING N N 25 08O C3 H3 SING N N 26 08O C4 H4 SING N N 27 08O C4 H5 SING N N 28 08O C5 H6 SING N N 29 08O C5 H7 SING N N 30 08O C6 H8 SING N N 31 08O C6 H9 SING N N 32 08O C7 H10 SING N N 33 08O C7 H11 SING N N 34 08O C8 H12 SING N N 35 08O C8 H13 SING N N 36 08O C9 H14 SING N N 37 08O C9 H15 SING N N 38 08O C10 H16 SING N N 39 08O C10 H17 SING N N 40 08O C11 H18 SING N N 41 08O C11 H19 SING N N 42 08O C12 H20 SING N N 43 08O C12 H21 SING N N 44 08O C13 H22 SING N N 45 08O C14 H24 SING N N 46 08O C15 H26 SING N N 47 08O C15 H27 SING N N 48 08O C16 H28 SING N N 49 08O C16 H29 SING N N 50 08O C17 H30 SING N N 51 08O C17 H31 SING N N 52 08O C18 H32 SING N N 53 08O C18 H33 SING N N 54 08O C19 H34 SING N N 55 08O C19 H35 SING N N 56 08O C20 H36 SING N N 57 08O C20 H37 SING N N 58 08O C21 H38 SING N N 59 08O C21 H39 SING N N 60 08O C22 H40 SING N N 61 08O C22 H41 SING N N 62 08O C22 H42 SING N N 63 08O C2 H43 SING N N 64 08O C3 H44 SING N N 65 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 08O InChI InChI 1.03 "InChI=1S/C22H42O2/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18-19-20-21-22(23)24/h9-10H,2-8,11-21H2,1H3,(H,23,24)/b10-9-" 08O InChIKey InChI 1.03 DPUOLQHDNGRHBS-KTKRTIGZSA-N 08O SMILES_CANONICAL CACTVS 3.385 "CCCCCCCC\C=C/CCCCCCCCCCCC(O)=O" 08O SMILES CACTVS 3.385 "CCCCCCCCC=CCCCCCCCCCCCC(O)=O" 08O SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCCCCCC/C=C\CCCCCCCCCCCC(=O)O" 08O SMILES "OpenEye OEToolkits" 2.0.7 "CCCCCCCCC=CCCCCCCCCCCCC(=O)O" # _pdbx_chem_comp_identifier.comp_id 08O _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(~{Z})-docos-13-enoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 08O "Create component" 2022-01-19 PDBJ 08O "Initial release" 2023-01-25 RCSB #