data_09F # _chem_comp.id 09F _chem_comp.name ;1-cyanocyclohexyl (3S,5'R)-2-oxo-1,2-dihydrospiro[indole-3,3'-pyrrolidine]-5'-carboxylate ; _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H21 N3 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2011-11-01 _chem_comp.pdbx_modified_date 2012-04-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 339.388 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 09F _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3UDR _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 09F C24 C24 C 0 1 N N N 18.954 35.704 44.043 3.515 -0.831 -1.045 C24 09F 1 09F C5 C5 C 0 1 Y N N 26.431 37.349 40.264 -4.361 2.700 0.319 C5 09F 2 09F C8 C8 C 0 1 Y N N 27.002 37.479 41.518 -5.441 2.261 -0.427 C8 09F 3 09F C3 C3 C 0 1 Y N N 25.108 36.990 40.116 -3.317 1.834 0.594 C3 09F 4 09F C6 C6 C 0 1 Y N N 26.273 37.239 42.658 -5.484 0.964 -0.893 C6 09F 5 09F C1 C1 C 0 1 Y N N 24.385 36.748 41.257 -3.354 0.539 0.126 C1 09F 6 09F C17 C17 C 0 1 Y N N 24.961 36.884 42.485 -4.440 0.084 -0.616 C17 09F 7 09F C14 C14 C 0 1 N N N 22.834 36.268 42.913 -3.085 -1.743 -0.517 C14 09F 8 09F C9 C9 C 0 1 N N N 19.817 36.518 41.567 1.273 -0.216 0.630 C9 09F 9 09F C21 C21 C 0 1 N N N 16.669 32.987 43.832 6.229 1.067 0.088 C21 09F 10 09F C20 C20 C 0 1 N N N 18.096 32.878 44.313 5.579 -0.089 0.852 C20 09F 11 09F C22 C22 C 0 1 N N N 16.338 34.416 43.477 5.525 1.249 -1.257 C22 09F 12 09F C19 C19 C 0 1 N N N 19.031 33.413 43.247 4.100 0.225 1.089 C19 09F 13 09F C23 C23 C 0 1 N N N 17.283 34.947 42.422 4.046 1.562 -1.021 C23 09F 14 09F C4 C4 C 0 1 N N N 22.002 37.419 40.913 -1.039 -0.299 -0.358 C4 09F 15 09F C13 C13 C 0 1 N N N 22.608 35.091 40.672 -2.164 -1.011 1.700 C13 09F 16 09F C7 C7 C 0 1 N N R 20.805 36.683 40.444 -0.190 0.024 0.900 C7 09F 17 09F C18 C18 C 0 1 N N N 18.722 34.851 42.882 3.396 0.407 -0.257 C18 09F 18 09F C2 C2 C 0 1 N N S 22.961 36.367 41.407 -2.416 -0.628 0.239 C2 09F 19 09F N25 N25 N 0 1 N N N 19.142 36.369 44.975 3.607 -1.786 -1.653 N25 09F 20 09F N16 N16 N 0 1 N N N 24.048 36.597 43.476 -4.252 -1.252 -0.978 N16 09F 21 09F N10 N10 N 0 1 N N N 21.338 35.387 39.951 -0.700 -0.937 1.913 N10 09F 22 09F O15 O15 O 0 1 N N N 21.813 35.968 43.520 -2.659 -2.867 -0.679 O15 09F 23 09F O12 O12 O 0 1 N N N 19.221 37.442 42.103 1.799 -1.235 1.009 O12 09F 24 09F O11 O11 O 0 1 N N N 19.613 35.196 41.789 1.992 0.704 -0.032 O11 09F 25 09F H1 H1 H 0 1 N N N 27.032 37.532 39.386 -4.331 3.716 0.681 H1 09F 26 09F H2 H2 H 0 1 N N N 28.038 37.774 41.602 -6.254 2.938 -0.644 H2 09F 27 09F H3 H3 H 0 1 N N N 24.657 36.903 39.138 -2.473 2.174 1.175 H3 09F 28 09F H4 H4 H 0 1 N N N 26.712 37.326 43.641 -6.331 0.629 -1.474 H4 09F 29 09F H5 H5 H 0 1 N N N 15.993 32.648 44.631 6.141 1.983 0.672 H5 09F 30 09F H6 H6 H 0 1 N N N 16.540 32.355 42.941 7.283 0.843 -0.080 H6 09F 31 09F H7 H7 H 0 1 N N N 18.335 31.823 44.515 5.668 -1.005 0.269 H7 09F 32 09F H8 H8 H 0 1 N N N 18.218 33.465 45.235 6.081 -0.219 1.811 H8 09F 33 09F H9 H9 H 0 1 N N N 16.425 35.038 44.380 5.988 2.072 -1.801 H9 09F 34 09F H10 H10 H 0 1 N N N 15.310 34.459 43.089 5.613 0.333 -1.841 H10 09F 35 09F H11 H11 H 0 1 N N N 18.925 32.792 42.345 3.637 -0.599 1.633 H11 09F 36 09F H12 H12 H 0 1 N N N 20.062 33.362 43.628 4.012 1.141 1.672 H12 09F 37 09F H13 H13 H 0 1 N N N 17.041 36.002 42.224 3.958 2.479 -0.437 H13 09F 38 09F H14 H14 H 0 1 N N N 17.162 34.354 41.503 3.544 1.692 -1.979 H14 09F 39 09F H15 H15 H 0 1 N N N 22.449 37.999 40.092 -1.100 0.569 -1.015 H15 09F 40 09F H16 H16 H 0 1 N N N 21.738 38.116 41.722 -0.633 -1.158 -0.892 H16 09F 41 09F H17 H17 H 0 1 N N N 22.473 34.258 41.377 -2.673 -0.311 2.362 H17 09F 42 09F H18 H18 H 0 1 N N N 23.404 34.814 39.965 -2.518 -2.025 1.886 H18 09F 43 09F H19 H19 H 0 1 N N N 20.252 37.209 39.652 -0.357 1.051 1.223 H19 09F 44 09F H20 H20 H 0 1 N N N 24.238 36.623 44.457 -4.888 -1.766 -1.499 H20 09F 45 09F H21 H21 H 0 1 N N N 20.673 34.660 40.124 -0.271 -1.843 1.799 H21 09F 46 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 09F N10 C7 SING N N 1 09F N10 C13 SING N N 2 09F C3 C5 DOUB Y N 3 09F C3 C1 SING Y N 4 09F C5 C8 SING Y N 5 09F C7 C4 SING N N 6 09F C7 C9 SING N N 7 09F C13 C2 SING N N 8 09F C4 C2 SING N N 9 09F C1 C2 SING N N 10 09F C1 C17 DOUB Y N 11 09F C2 C14 SING N N 12 09F C8 C6 DOUB Y N 13 09F C9 O11 SING N N 14 09F C9 O12 DOUB N N 15 09F O11 C18 SING N N 16 09F C23 C18 SING N N 17 09F C23 C22 SING N N 18 09F C17 C6 SING Y N 19 09F C17 N16 SING N N 20 09F C18 C19 SING N N 21 09F C18 C24 SING N N 22 09F C14 N16 SING N N 23 09F C14 O15 DOUB N N 24 09F C19 C20 SING N N 25 09F C22 C21 SING N N 26 09F C21 C20 SING N N 27 09F C24 N25 TRIP N N 28 09F C5 H1 SING N N 29 09F C8 H2 SING N N 30 09F C3 H3 SING N N 31 09F C6 H4 SING N N 32 09F C21 H5 SING N N 33 09F C21 H6 SING N N 34 09F C20 H7 SING N N 35 09F C20 H8 SING N N 36 09F C22 H9 SING N N 37 09F C22 H10 SING N N 38 09F C19 H11 SING N N 39 09F C19 H12 SING N N 40 09F C23 H13 SING N N 41 09F C23 H14 SING N N 42 09F C4 H15 SING N N 43 09F C4 H16 SING N N 44 09F C13 H17 SING N N 45 09F C13 H18 SING N N 46 09F C7 H19 SING N N 47 09F N16 H20 SING N N 48 09F N10 H21 SING N N 49 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 09F SMILES ACDLabs 12.01 "N#CC4(OC(=O)C3NCC1(c2c(NC1=O)cccc2)C3)CCCCC4" 09F InChI InChI 1.03 "InChI=1S/C19H21N3O3/c20-11-18(8-4-1-5-9-18)25-16(23)15-10-19(12-21-15)13-6-2-3-7-14(13)22-17(19)24/h2-3,6-7,15,21H,1,4-5,8-10,12H2,(H,22,24)/t15-,19-/m1/s1" 09F InChIKey InChI 1.03 VRCMTLQTPNLTIN-DNVCBOLYSA-N 09F SMILES_CANONICAL CACTVS 3.370 "O=C1Nc2ccccc2[C@@]13CN[C@H](C3)C(=O)OC4(CCCCC4)C#N" 09F SMILES CACTVS 3.370 "O=C1Nc2ccccc2[C]13CN[CH](C3)C(=O)OC4(CCCCC4)C#N" 09F SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 "c1ccc2c(c1)[C@]3(C[C@@H](NC3)C(=O)OC4(CCCCC4)C#N)C(=O)N2" 09F SMILES "OpenEye OEToolkits" 1.7.2 "c1ccc2c(c1)C3(CC(NC3)C(=O)OC4(CCCCC4)C#N)C(=O)N2" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 09F "SYSTEMATIC NAME" ACDLabs 12.01 ;1-cyanocyclohexyl (3S,5'R)-2-oxo-1,2-dihydrospiro[indole-3,3'-pyrrolidine]-5'-carboxylate ; 09F "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 ;(1-cyanocyclohexyl) (2'R,3S)-2-oxidanylidenespiro[1H-indole-3,4'-pyrrolidine]-2'-carboxylate ; # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 09F "Create component" 2011-11-01 RCSB #