data_0A # _chem_comp.id 0A _chem_comp.name "L-ADENOSINE-5'-MONOPHOSPHATE" _chem_comp.type "L-RNA LINKING" _chem_comp.pdbx_type ATOMN _chem_comp.formula "C10 H14 N5 O7 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2009-07-27 _chem_comp.pdbx_modified_date 2015-04-24 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 347.221 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 0A _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4R8I _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 0A P P P 0 1 N N N 15.499 -44.373 -33.911 4.773 -1.023 0.078 P 0A 1 0A N1 N1 N 0 1 Y N N 7.617 -42.364 -29.647 -5.772 -0.452 0.485 N1 0A 2 0A C2 C2 C 0 1 Y N N 8.361 -41.197 -29.144 -5.192 0.650 0.927 C2 0A 3 0A N3 N3 N 0 1 Y N N 9.745 -41.185 -29.656 -3.894 0.849 0.839 N3 0A 4 0A C4 C4 C 0 1 Y N N 10.214 -42.126 -30.488 -3.103 -0.069 0.292 C4 0A 5 0A C5 C5 C 0 1 Y N N 9.448 -43.148 -30.892 -3.672 -1.259 -0.193 C5 0A 6 0A C6 C6 C 0 1 Y N N 8.179 -43.256 -30.471 -5.062 -1.425 -0.076 C6 0A 7 0A N6 N6 N 0 1 N N N 7.478 -44.306 -30.899 -5.679 -2.576 -0.536 N6 0A 8 0A N7 N7 N 0 1 Y N N 10.190 -43.882 -31.703 -2.661 -2.010 -0.692 N7 0A 9 0A C8 C8 C 0 1 Y N N 11.400 -43.330 -31.813 -1.536 -1.372 -0.548 C8 0A 10 0A N9 N9 N 0 1 Y N N 11.407 -42.240 -31.059 -1.756 -0.169 0.054 N9 0A 11 0A "C1'" "C1'" C 0 1 N N S 12.465 -41.230 -30.798 -0.740 0.833 0.386 "C1'" 0A 12 0A "C2'" "C2'" C 0 1 N N S 12.528 -40.174 -31.930 -0.554 1.831 -0.785 "C2'" 0A 13 0A "O2'" "O2'" O 0 1 N N N 13.045 -38.999 -31.362 -1.497 2.901 -0.697 "O2'" 0A 14 0A "C3'" "C3'" C 0 1 N N R 13.558 -40.749 -32.832 0.887 2.343 -0.549 "C3'" 0A 15 0A "O3'" "O3'" O 0 1 N N N 14.129 -39.751 -33.706 0.867 3.595 0.140 "O3'" 0A 16 0A "C4'" "C4'" C 0 1 N N S 14.577 -41.202 -31.793 1.536 1.255 0.328 "C4'" 0A 17 0A "O4'" "O4'" O 0 1 N N N 13.766 -41.843 -30.764 0.560 0.216 0.513 "O4'" 0A 18 0A "C5'" "C5'" C 0 1 N N N 15.518 -42.245 -32.381 2.772 0.688 -0.375 "C5'" 0A 19 0A "O5'" "O5'" O 0 1 N N N 14.765 -43.159 -33.166 3.432 -0.235 0.493 "O5'" 0A 20 0A OP1 OP1 O 0 1 N N N 16.675 -43.941 -34.696 4.543 -1.755 -1.188 OP1 0A 21 0A OP2 OP2 O 0 1 N N N 14.419 -45.151 -34.585 5.975 0.030 -0.121 OP2 0A 22 0A OP3 OP3 O 0 1 N Y N 16.051 -45.252 -32.696 5.162 -2.068 1.239 OP3 0A 23 0A H2 H2 H 0 1 N N N 7.947 -40.447 -28.486 -5.806 1.416 1.376 H2 0A 24 0A HN6 HN6 H 0 1 N N N 6.557 -44.273 -30.511 -5.150 -3.279 -0.945 HN6 0A 25 0A HN6A HN6A H 0 0 N N N 7.420 -44.283 -31.897 -6.640 -2.679 -0.450 HN6A 0A 26 0A H8 H8 H 0 1 N N N 12.222 -43.703 -32.407 -0.570 -1.742 -0.859 H8 0A 27 0A "H1'" "H1'" H 0 1 N N N 12.260 -40.718 -29.847 -1.006 1.359 1.303 "H1'" 0A 28 0A "H2'" "H2'" H 0 1 N N N 11.553 -40.045 -32.423 -0.634 1.322 -1.746 "H2'" 0A 29 0A "HO2'" "HO2'" H 0 0 N N N 13.100 -38.323 -32.027 -1.420 3.552 -1.408 "HO2'" 0A 30 0A "H3'" "H3'" H 0 1 N N N 13.164 -41.610 -33.392 1.419 2.437 -1.496 "H3'" 0A 31 0A "HO3'" "HO3'" H 0 0 N Y N 14.781 -40.156 -34.266 0.417 4.302 -0.342 "HO3'" 0A 32 0A "H4'" "H4'" H 0 1 N N N 15.140 -40.345 -31.396 1.817 1.676 1.294 "H4'" 0A 33 0A "H5'" "H5'" H 0 1 N N N 16.270 -41.749 -33.013 2.467 0.175 -1.287 "H5'" 0A 34 0A "H5'A" "H5'A" H 0 0 N N N 16.023 -42.787 -31.567 3.452 1.502 -0.626 "H5'A" 0A 35 0A HOP2 HOP2 H 0 0 N N N 14.643 -45.278 -35.499 6.181 0.546 0.670 HOP2 0A 36 0A HOP3 HOP3 H 0 0 N Y N 16.998 -45.302 -32.746 5.962 -2.580 1.056 HOP3 0A 37 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 0A OP1 P DOUB N N 1 0A OP2 P SING N N 2 0A P "O5'" SING N N 3 0A P OP3 SING N N 4 0A C6 N1 DOUB Y N 5 0A N1 C2 SING Y N 6 0A N3 C2 DOUB Y N 7 0A C2 H2 SING N N 8 0A C4 N3 SING Y N 9 0A N9 C4 SING Y N 10 0A C5 C4 DOUB Y N 11 0A N7 C5 SING Y N 12 0A C5 C6 SING Y N 13 0A N6 C6 SING N N 14 0A N6 HN6 SING N N 15 0A N6 HN6A SING N N 16 0A C8 N7 DOUB Y N 17 0A C8 N9 SING Y N 18 0A C8 H8 SING N N 19 0A N9 "C1'" SING N N 20 0A "C2'" "C1'" SING N N 21 0A "C1'" "O4'" SING N N 22 0A "C1'" "H1'" SING N N 23 0A "C3'" "C2'" SING N N 24 0A "C2'" "O2'" SING N N 25 0A "C2'" "H2'" SING N N 26 0A "O2'" "HO2'" SING N N 27 0A "O3'" "C3'" SING N N 28 0A "C3'" "C4'" SING N N 29 0A "C3'" "H3'" SING N N 30 0A "O3'" "HO3'" SING N N 31 0A "C5'" "C4'" SING N N 32 0A "C4'" "O4'" SING N N 33 0A "C4'" "H4'" SING N N 34 0A "O5'" "C5'" SING N N 35 0A "C5'" "H5'" SING N N 36 0A "C5'" "H5'A" SING N N 37 0A OP2 HOP2 SING N N 38 0A OP3 HOP3 SING N N 39 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 0A SMILES ACDLabs 12.01 "O=P(O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O" 0A InChI InChI 1.03 "InChI=1S/C10H14N5O7P/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(22-10)1-21-23(18,19)20/h2-4,6-7,10,16-17H,1H2,(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m0/s1" 0A InChIKey InChI 1.03 UDMBCSSLTHHNCD-DEGSGYPDSA-N 0A SMILES_CANONICAL CACTVS 3.385 "Nc1ncnc2n(cnc12)[C@H]3O[C@@H](CO[P](O)(O)=O)[C@H](O)[C@@H]3O" 0A SMILES CACTVS 3.385 "Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(O)=O)[CH](O)[CH]3O" 0A SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1nc(c2c(n1)n(cn2)[C@@H]3[C@H]([C@H]([C@@H](O3)COP(=O)(O)O)O)O)N" 0A SMILES "OpenEye OEToolkits" 1.7.6 "c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)O)O)O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 0A "SYSTEMATIC NAME" ACDLabs 12.01 "9-(5-O-phosphono-beta-L-ribofuranosyl)-9H-purin-6-amine" 0A "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[(2S,3R,4S,5S)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl dihydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 0A "Create component" 2009-07-27 RCSB 0A "Modify aromatic_flag" 2011-06-04 RCSB 0A "Modify descriptor" 2011-06-04 RCSB 0A "Modify atom id" 2014-10-15 RCSB 0A "Initial release" 2015-04-29 RCSB #