data_0E5 # _chem_comp.id 0E5 _chem_comp.name "(2S,3R)-2-azanyl-3-methyl-3-oxidanyl-pentanoic acid" _chem_comp.type "L-PEPTIDE LINKING" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C6 H13 N O3" _chem_comp.mon_nstd_parent_comp_id THR _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2011-12-22 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 147.172 _chem_comp.one_letter_code T _chem_comp.three_letter_code 0E5 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3UT5 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 0E5 C1 C1 C 0 1 N N N N N N 9.226 84.950 101.898 2.706 -1.255 0.201 C1 0E5 1 0E5 C2 C2 C 0 1 N N N N N N 9.369 86.460 102.066 1.333 -1.032 -0.437 C2 0E5 2 0E5 C3 C3 C 0 1 N N S N N N 8.748 87.024 103.371 0.793 0.337 -0.018 C3 0E5 3 0E5 C4 C4 C 0 1 N N N N N N 7.237 87.287 103.099 1.756 1.430 -0.484 C4 0E5 4 0E5 N N1 N 0 1 N N N Y Y N 8.739 89.271 104.442 -1.046 1.920 -0.352 N1 0E5 5 0E5 CA C19 C 0 1 N N S Y N N 9.561 88.311 103.701 -0.580 0.560 -0.656 C19 0E5 6 0E5 C C20 C 0 1 N N N Y N Y 10.553 88.952 102.668 -1.560 -0.442 -0.103 C20 0E5 7 0E5 O O6 O 0 1 N N N Y N Y 11.779 88.797 102.854 -2.328 -0.117 0.771 O6 0E5 8 0E5 H11 H1 H 0 1 N N N N N N 9.692 84.640 100.951 3.392 -0.476 -0.131 H1 0E5 9 0E5 H12 H2 H 0 1 N N N N N N 9.723 84.439 102.736 2.612 -1.219 1.287 H2 0E5 10 0E5 H13 H3 H 0 1 N N N N N N 8.159 84.682 101.886 3.091 -2.230 -0.097 H3 0E5 11 0E5 H4 H4 H 0 1 N N N N N N 10.441 86.706 102.061 1.427 -1.069 -1.522 H4 0E5 12 0E5 H5 H5 H 0 1 N N N N N N 8.877 86.949 101.212 0.647 -1.811 -0.105 H5 0E5 13 0E5 H6 H6 H 0 1 N N N N N N 6.765 87.689 104.008 1.850 1.393 -1.569 H6 0E5 14 0E5 H7 H7 H 0 1 N N N N N N 7.133 88.014 102.280 1.371 2.405 -0.185 H7 0E5 15 0E5 H8 H8 H 0 1 N N N N N N 6.746 86.344 102.817 2.734 1.271 -0.029 H8 0E5 16 0E5 H H30 H 0 1 N N N Y Y N 8.140 88.780 105.074 -1.125 2.060 0.645 H30 0E5 17 0E5 HA H31 H 0 1 N N N Y N N 10.253 87.945 104.474 -0.503 0.435 -1.736 H31 0E5 18 0E5 OXT OXT O 0 1 N Y N Y N Y ? ? ? -1.579 -1.696 -0.581 OXT 0E5 19 0E5 HXT HXT H 0 1 N Y N Y N Y ? ? ? -2.225 -2.303 -0.195 HXT 0E5 20 0E5 H2 H10 H 0 1 N Y N Y Y N 9.332 89.889 104.958 -0.439 2.611 -0.767 H10 0E5 21 0E5 O3 O3 O 0 1 N Y N N N N ? ? ? 0.670 0.385 1.405 O3 0E5 22 0E5 H9 H9 H 0 1 N Y N N N N ? ? ? 0.073 -0.282 1.771 H9 0E5 23 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 0E5 C1 C2 SING N N 1 0E5 C2 C3 SING N N 2 0E5 C O DOUB N N 3 0E5 C CA SING N N 4 0E5 C4 C3 SING N N 5 0E5 C3 CA SING N N 6 0E5 CA N SING N N 7 0E5 C1 H11 SING N N 8 0E5 C1 H12 SING N N 9 0E5 C1 H13 SING N N 10 0E5 C2 H4 SING N N 11 0E5 C2 H5 SING N N 12 0E5 C4 H6 SING N N 13 0E5 C4 H7 SING N N 14 0E5 C4 H8 SING N N 15 0E5 N H SING N N 16 0E5 CA HA SING N N 17 0E5 C OXT SING N N 18 0E5 OXT HXT SING N N 19 0E5 N H2 SING N N 20 0E5 C3 O3 SING N N 21 0E5 O3 H9 SING N N 22 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 0E5 SMILES ACDLabs 12.01 "O=C(O)C(N)C(O)(C)CC" 0E5 InChI InChI 1.03 "InChI=1S/C6H13NO3/c1-3-6(2,10)4(7)5(8)9/h4,10H,3,7H2,1-2H3,(H,8,9)/t4-,6?/m1/s1" 0E5 InChIKey InChI 1.03 XHNHHUFIUAJZNF-NJXYFUOMSA-N 0E5 SMILES_CANONICAL CACTVS 3.370 "CC[C@](C)(O)[C@H](N)C(O)=O" 0E5 SMILES CACTVS 3.370 "CC[C](C)(O)[CH](N)C(O)=O" 0E5 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CC[C@](C)([C@@H](C(=O)O)N)O" 0E5 SMILES "OpenEye OEToolkits" 1.7.6 "CCC(C)(C(C(=O)O)N)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 0E5 "SYSTEMATIC NAME" ACDLabs 12.01 "(2S,3S)-2-amino-3-hydroxy-3-methylpentanoic acid (non-preferred name)" 0E5 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2S,3R)-2-azanyl-3-methyl-3-oxidanyl-pentanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 0E5 "Create component" 2011-12-22 RCSB 0E5 "Modify name" 2012-01-12 RCSB 0E5 "Modify backbone" 2023-11-03 PDBE 0E5 "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id 0E5 _pdbx_chem_comp_pcm.modified_residue_id THR _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Non-standard residue" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom ? _pdbx_chem_comp_pcm.modified_residue_id_linking_atom ? _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #