data_0EI # _chem_comp.id 0EI _chem_comp.name "4-(dimethylamino)-N-[(5Z)-9-[[4-[5-(4-fluorophenyl)-3-methyl-2-methylsulfanyl-imidazol-4-yl]pyridin-2-yl]amino]-11,12-dihydrobenzo[c][1,2]benzodiazocin-2-yl]butanamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C36 H37 F N8 O S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-06-05 _chem_comp.pdbx_modified_date 2021-07-16 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 648.795 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 0EI _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7ORE _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 0EI N1 N1 N 0 1 N N N -1.893 29.713 29.444 3.725 -3.904 0.972 N1 0EI 1 0EI C2 C1 C 0 1 Y N N -3.189 28.519 26.182 6.647 -3.111 -1.074 C2 0EI 2 0EI N3 N2 N 0 1 N N N 4.158 29.641 32.343 -1.930 -0.763 -0.491 N3 0EI 3 0EI C4 C2 C 0 1 Y N N -2.008 28.893 28.249 4.735 -3.231 0.363 C4 0EI 4 0EI N4 N3 N 0 1 Y N N 5.149 22.548 32.447 -8.228 1.496 -0.472 N4 0EI 5 0EI C5 C3 C 0 1 Y N N 0.509 30.041 30.322 1.550 -2.813 0.662 C5 0EI 6 0EI C6 C4 C 0 1 Y N N 1.006 31.073 31.120 0.330 -3.500 0.415 C6 0EI 7 0EI F F1 F 0 1 N N N 9.361 23.392 37.202 -3.114 4.959 1.509 F 0EI 8 0EI C23 C5 C 0 1 Y N N 8.434 23.423 36.206 -4.041 4.057 1.118 C23 0EI 9 0EI C22 C6 C 0 1 Y N N 7.379 24.285 36.321 -4.076 2.803 1.706 C22 0EI 10 0EI C21 C7 C 0 1 Y N N 6.470 24.354 35.280 -5.020 1.879 1.310 C21 0EI 11 0EI C24 C8 C 0 1 Y N N 8.614 22.611 35.122 -4.959 4.392 0.135 C24 0EI 12 0EI C25 C9 C 0 1 Y N N 7.699 22.685 34.087 -5.910 3.477 -0.264 C25 0EI 13 0EI C20 C10 C 0 1 Y N N 6.626 23.566 34.145 -5.942 2.209 0.317 C20 0EI 14 0EI C19 C11 C 0 1 Y N N 5.696 23.690 33.004 -6.962 1.222 -0.108 C19 0EI 15 0EI C26 C12 C 0 1 Y N N 4.406 22.960 31.453 -8.848 0.382 -0.785 C26 0EI 16 0EI S S1 S 0 1 N N N 3.504 21.946 30.351 -10.523 0.261 -1.319 S 0EI 17 0EI C27 C13 C 0 1 N N N 1.878 22.018 31.108 -10.993 2.008 -1.275 C27 0EI 18 0EI N5 N4 N 0 1 Y N N 4.425 24.330 31.318 -7.992 -0.665 -0.633 N5 0EI 19 0EI C28 C14 C 0 1 N N N 3.401 25.097 30.602 -8.292 -2.078 -0.879 C28 0EI 20 0EI C18 C15 C 0 1 Y N N 5.263 24.811 32.320 -6.784 -0.145 -0.201 C18 0EI 21 0EI C17 C16 C 0 1 Y N N 5.606 26.244 32.480 -5.554 -0.899 0.100 C17 0EI 22 0EI C16 C17 C 0 1 Y N N 4.652 27.233 32.244 -4.308 -0.452 -0.354 C16 0EI 23 0EI C29 C18 C 0 1 Y N N 6.860 26.616 32.934 -5.599 -2.083 0.854 C29 0EI 24 0EI C30 C19 C 0 1 Y N N 7.114 27.949 33.161 -4.428 -2.757 1.114 C30 0EI 25 0EI N6 N5 N 0 1 Y N N 6.216 28.925 32.971 -3.270 -2.308 0.665 N6 0EI 26 0EI C15 C20 C 0 1 Y N N 5.007 28.568 32.520 -3.176 -1.194 -0.047 C15 0EI 27 0EI C8 C21 C 0 1 Y N N 2.942 29.756 31.643 -0.779 -1.453 -0.112 C8 0EI 28 0EI C7 C22 C 0 1 Y N N 2.217 30.930 31.769 -0.804 -2.837 0.038 C7 0EI 29 0EI C9 C23 C 0 1 Y N N 2.498 28.767 30.772 0.404 -0.770 0.119 C9 0EI 30 0EI C10 C24 C 0 1 Y N N 1.303 28.917 30.066 1.563 -1.435 0.495 C10 0EI 31 0EI N2 N6 N 0 1 N N N -0.937 30.159 30.180 2.545 -3.600 1.051 N2 0EI 32 0EI C11 C25 C 0 1 N N N 1.022 27.945 28.945 2.774 -0.550 0.670 C11 0EI 33 0EI C12 C26 C 0 1 N N N -0.315 27.188 29.090 3.831 -1.219 1.544 C12 0EI 34 0EI C13 C27 C 0 1 Y N N -1.316 27.690 28.079 4.843 -1.866 0.627 C13 0EI 35 0EI C3 C28 C 0 1 Y N N -2.946 29.297 27.297 5.640 -3.855 -0.495 C3 0EI 36 0EI C14 C29 C 0 1 Y N N -1.561 26.926 26.939 5.850 -1.128 0.053 C14 0EI 37 0EI C1 C30 C 0 1 Y N N -2.483 27.343 25.983 6.756 -1.751 -0.802 C1 0EI 38 0EI N N7 N 0 1 N N N -2.674 26.619 24.778 7.780 -1.006 -1.390 N 0EI 39 0EI C C31 C 0 1 N N N -2.068 25.472 24.391 8.361 -0.001 -0.705 C 0EI 40 0EI O O1 O 0 1 N N N -1.185 24.915 25.035 7.944 0.306 0.391 O 0EI 41 0EI C31 C32 C 0 1 N N N -2.567 24.913 23.079 9.530 0.741 -1.302 C31 0EI 42 0EI C32 C33 C 0 1 N N N -1.456 24.335 22.196 9.997 1.824 -0.327 C32 0EI 43 0EI C33 C34 C 0 1 N N N -1.983 23.244 21.271 11.184 2.577 -0.933 C33 0EI 44 0EI N7 N8 N 0 1 N N N -2.589 22.105 21.978 11.633 3.617 0.002 N7 0EI 45 0EI C35 C35 C 0 1 N N N -2.468 20.883 21.190 12.908 4.201 -0.433 C35 0EI 46 0EI C34 C36 C 0 1 N N N -3.993 22.365 22.280 10.607 4.655 0.167 C34 0EI 47 0EI H1 H1 H 0 1 N N N -3.932 28.828 25.462 7.352 -3.585 -1.741 H1 0EI 48 0EI H2 H2 H 0 1 N N N 4.459 30.484 32.790 -1.862 0.017 -1.063 H2 0EI 49 0EI H3 H3 H 0 1 N N N 0.441 31.987 31.230 0.299 -4.573 0.529 H3 0EI 50 0EI H4 H4 H 0 1 N N N 7.258 24.897 37.203 -3.361 2.549 2.475 H4 0EI 51 0EI H5 H5 H 0 1 N N N 5.629 25.028 35.350 -5.045 0.901 1.769 H5 0EI 52 0EI H6 H6 H 0 1 N N N 9.450 21.928 35.074 -4.928 5.371 -0.320 H6 0EI 53 0EI H7 H7 H 0 1 N N N 7.820 22.049 33.222 -6.622 3.737 -1.034 H7 0EI 54 0EI H8 H8 H 0 1 N N N 1.172 21.414 30.519 -12.033 2.112 -1.586 H8 0EI 55 0EI H9 H9 H 0 1 N N N 1.933 21.622 32.133 -10.878 2.390 -0.260 H9 0EI 56 0EI H10 H10 H 0 1 N N N 1.533 23.062 31.136 -10.353 2.574 -1.951 H10 0EI 57 0EI H11 H11 H 0 1 N N N 3.650 26.168 30.641 -8.064 -2.322 -1.916 H11 0EI 58 0EI H12 H12 H 0 1 N N N 3.363 24.768 29.553 -7.687 -2.699 -0.218 H12 0EI 59 0EI H13 H13 H 0 1 N N N 2.422 24.931 31.074 -9.349 -2.264 -0.686 H13 0EI 60 0EI H14 H14 H 0 1 N N N 3.673 26.984 31.862 -4.228 0.456 -0.934 H14 0EI 61 0EI H15 H15 H 0 1 N N N 7.625 25.873 33.107 -6.541 -2.458 1.226 H15 0EI 62 0EI H16 H16 H 0 1 N N N 8.097 28.225 33.514 -4.457 -3.668 1.694 H16 0EI 63 0EI H17 H17 H 0 1 N N N 2.600 31.736 32.377 -1.716 -3.385 -0.144 H17 0EI 64 0EI H18 H18 H 0 1 N N N 3.086 27.871 30.640 0.425 0.304 0.003 H18 0EI 65 0EI H19 H19 H 0 1 N N N 1.836 27.206 28.916 3.204 -0.335 -0.308 H19 0EI 66 0EI H20 H20 H 0 1 N N N 1.001 28.505 27.999 2.467 0.387 1.137 H20 0EI 67 0EI H21 H21 H 0 1 N N N -0.713 27.346 30.103 4.322 -0.473 2.168 H21 0EI 68 0EI H22 H22 H 0 1 N N N -0.143 26.114 28.927 3.364 -1.977 2.173 H22 0EI 69 0EI H23 H23 H 0 1 N N N -3.485 30.223 27.433 5.554 -4.911 -0.704 H23 0EI 70 0EI H24 H24 H 0 1 N N N -1.028 25.998 26.795 5.938 -0.072 0.262 H24 0EI 71 0EI H25 H25 H 0 1 N N N -3.338 27.003 24.136 8.074 -1.211 -2.292 H25 0EI 72 0EI H26 H26 H 0 1 N N N -3.067 25.721 22.525 10.346 0.043 -1.489 H26 0EI 73 0EI H27 H27 H 0 1 N N N -3.291 24.114 23.295 9.225 1.204 -2.241 H27 0EI 74 0EI H28 H28 H 0 1 N N N -0.673 23.909 22.841 9.181 2.522 -0.141 H28 0EI 75 0EI H29 H29 H 0 1 N N N -1.028 25.144 21.586 10.302 1.361 0.611 H29 0EI 76 0EI H30 H30 H 0 1 N N N -1.145 22.869 20.665 12.000 1.879 -1.120 H30 0EI 77 0EI H31 H31 H 0 1 N N N -2.744 23.687 20.611 10.879 3.040 -1.872 H31 0EI 78 0EI H33 H33 H 0 1 N N N -2.927 20.046 21.737 12.785 4.648 -1.419 H33 0EI 79 0EI H34 H34 H 0 1 N N N -2.981 21.016 20.226 13.218 4.968 0.277 H34 0EI 80 0EI H35 H35 H 0 1 N N N -1.405 20.665 21.012 13.668 3.421 -0.479 H35 0EI 81 0EI H36 H36 H 0 1 N N N -4.076 23.287 22.874 9.694 4.205 0.557 H36 0EI 82 0EI H37 H37 H 0 1 N N N -4.554 22.482 21.341 10.965 5.412 0.865 H37 0EI 83 0EI H38 H38 H 0 1 N N N -4.407 21.522 22.852 10.401 5.118 -0.798 H38 0EI 84 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 0EI C35 N7 SING N N 1 0EI C33 N7 SING N N 2 0EI C33 C32 SING N N 3 0EI N7 C34 SING N N 4 0EI C32 C31 SING N N 5 0EI C31 C SING N N 6 0EI C N SING N N 7 0EI C O DOUB N N 8 0EI N C1 SING N N 9 0EI C1 C2 DOUB Y N 10 0EI C1 C14 SING Y N 11 0EI C2 C3 SING Y N 12 0EI C14 C13 DOUB Y N 13 0EI C3 C4 DOUB Y N 14 0EI C13 C4 SING Y N 15 0EI C13 C12 SING N N 16 0EI C4 N1 SING N N 17 0EI C11 C12 SING N N 18 0EI C11 C10 SING N N 19 0EI N1 N2 DOUB N N 20 0EI C10 C5 DOUB Y N 21 0EI C10 C9 SING Y N 22 0EI N2 C5 SING N N 23 0EI C5 C6 SING Y N 24 0EI S C27 SING N N 25 0EI S C26 SING N N 26 0EI C28 N5 SING N N 27 0EI C9 C8 DOUB Y N 28 0EI C6 C7 DOUB Y N 29 0EI N5 C26 SING Y N 30 0EI N5 C18 SING Y N 31 0EI C26 N4 DOUB Y N 32 0EI C8 C7 SING Y N 33 0EI C8 N3 SING N N 34 0EI C16 C17 DOUB Y N 35 0EI C16 C15 SING Y N 36 0EI C18 C17 SING N N 37 0EI C18 C19 DOUB Y N 38 0EI N3 C15 SING N N 39 0EI N4 C19 SING Y N 40 0EI C17 C29 SING Y N 41 0EI C15 N6 DOUB Y N 42 0EI C29 C30 DOUB Y N 43 0EI N6 C30 SING Y N 44 0EI C19 C20 SING N N 45 0EI C25 C20 DOUB Y N 46 0EI C25 C24 SING Y N 47 0EI C20 C21 SING Y N 48 0EI C24 C23 DOUB Y N 49 0EI C21 C22 DOUB Y N 50 0EI C23 C22 SING Y N 51 0EI C23 F SING N N 52 0EI C2 H1 SING N N 53 0EI N3 H2 SING N N 54 0EI C6 H3 SING N N 55 0EI C22 H4 SING N N 56 0EI C21 H5 SING N N 57 0EI C24 H6 SING N N 58 0EI C25 H7 SING N N 59 0EI C27 H8 SING N N 60 0EI C27 H9 SING N N 61 0EI C27 H10 SING N N 62 0EI C28 H11 SING N N 63 0EI C28 H12 SING N N 64 0EI C28 H13 SING N N 65 0EI C16 H14 SING N N 66 0EI C29 H15 SING N N 67 0EI C30 H16 SING N N 68 0EI C7 H17 SING N N 69 0EI C9 H18 SING N N 70 0EI C11 H19 SING N N 71 0EI C11 H20 SING N N 72 0EI C12 H21 SING N N 73 0EI C12 H22 SING N N 74 0EI C3 H23 SING N N 75 0EI C14 H24 SING N N 76 0EI N H25 SING N N 77 0EI C31 H26 SING N N 78 0EI C31 H27 SING N N 79 0EI C32 H28 SING N N 80 0EI C32 H29 SING N N 81 0EI C33 H30 SING N N 82 0EI C33 H31 SING N N 83 0EI C35 H33 SING N N 84 0EI C35 H34 SING N N 85 0EI C35 H35 SING N N 86 0EI C34 H36 SING N N 87 0EI C34 H37 SING N N 88 0EI C34 H38 SING N N 89 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 0EI InChI InChI 1.03 "InChI=1S/C36H37FN8OS/c1-44(2)19-5-6-33(46)40-29-14-16-31-25(21-29)8-7-24-20-28(13-15-30(24)42-43-31)39-32-22-26(17-18-38-32)35-34(41-36(47-4)45(35)3)23-9-11-27(37)12-10-23/h9-18,20-22H,5-8,19H2,1-4H3,(H,38,39)(H,40,46)/b43-42-" 0EI InChIKey InChI 1.03 RSENMMKQMACIQF-RPYQSRGHSA-N 0EI SMILES_CANONICAL CACTVS 3.385 "CSc1nc(c2ccc(F)cc2)c(n1C)c3ccnc(Nc4ccc5N=Nc6ccc(NC(=O)CCCN(C)C)cc6CCc5c4)c3" 0EI SMILES CACTVS 3.385 "CSc1nc(c2ccc(F)cc2)c(n1C)c3ccnc(Nc4ccc5N=Nc6ccc(NC(=O)CCCN(C)C)cc6CCc5c4)c3" 0EI SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cn1c(c(nc1SC)c2ccc(cc2)F)c3ccnc(c3)Nc4ccc/5c(c4)CCc6cc(ccc6/N=N5)NC(=O)CCCN(C)C" 0EI SMILES "OpenEye OEToolkits" 2.0.7 "Cn1c(c(nc1SC)c2ccc(cc2)F)c3ccnc(c3)Nc4ccc5c(c4)CCc6cc(ccc6N=N5)NC(=O)CCCN(C)C" # _pdbx_chem_comp_identifier.comp_id 0EI _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "4-(dimethylamino)-~{N}-[(5~{Z})-9-[[4-[5-(4-fluorophenyl)-3-methyl-2-methylsulfanyl-imidazol-4-yl]pyridin-2-yl]amino]-11,12-dihydrobenzo[c][1,2]benzodiazocin-2-yl]butanamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 0EI "Create component" 2021-06-05 PDBE 0EI "Initial release" 2021-07-21 RCSB ##