data_0MK # _chem_comp.id 0MK _chem_comp.name beta-L-ribopyranose _chem_comp.type "L-saccharide, beta linking" _chem_comp.pdbx_type ATOMS _chem_comp.formula "C5 H10 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "beta-L-ribose; L-ribose; ribose; L-ribopyranose" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2012-03-01 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 150.130 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 0MK _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4DUX _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 0MK beta-L-ribose PDB ? 2 0MK L-ribose PDB ? 3 0MK ribose PDB ? 4 0MK L-ribopyranose PDB ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 0MK C1 C1 C 0 1 N N S -10.353 -28.698 -26.090 -1.251 -0.532 0.302 C1 0MK 1 0MK C2 C2 C 0 1 N N S -9.271 -29.482 -26.831 -0.814 0.652 -0.565 C2 0MK 2 0MK C3 C3 C 0 1 N N S -9.918 -30.204 -28.012 0.661 0.959 -0.289 C3 0MK 3 0MK C4 C4 C 0 1 N N S -10.540 -29.157 -28.925 1.493 -0.298 -0.561 C4 0MK 4 0MK C5 C5 C 0 1 N N N -11.607 -28.425 -28.127 0.966 -1.446 0.306 C5 0MK 5 0MK O1 O1 O 0 1 N Y N -9.771 -27.951 -25.022 -2.611 -0.860 0.009 O1 0MK 6 0MK O2 O2 O 0 1 N N N -8.604 -30.417 -25.968 -1.608 1.797 -0.245 O2 0MK 7 0MK O3 O3 O 0 1 N N N -10.959 -31.046 -27.508 0.821 1.352 1.076 O3 0MK 8 0MK O4 O4 O 0 1 N N N -11.102 -29.752 -30.103 2.861 -0.045 -0.237 O4 0MK 9 0MK O5 O5 O 0 1 N N N -10.972 -27.798 -27.005 -0.418 -1.659 0.022 O5 0MK 10 0MK H1 H1 H 0 1 N N N -11.095 -29.407 -25.695 -1.160 -0.265 1.355 H1 0MK 11 0MK H2 H2 H 0 1 N N N -8.538 -28.764 -27.228 -0.944 0.401 -1.617 H2 0MK 12 0MK H3 H3 H 0 1 N N N -9.161 -30.784 -28.561 0.994 1.766 -0.942 H3 0MK 13 0MK H4 H4 H 0 1 N N N -9.760 -28.435 -29.210 1.410 -0.569 -1.613 H4 0MK 14 0MK H51 H5 H 0 1 N N N -12.087 -27.662 -28.758 1.527 -2.354 0.085 H51 0MK 15 0MK H52 H6 H 0 1 N N N -12.365 -29.140 -27.775 1.086 -1.191 1.359 H52 0MK 16 0MK HO1 H7 H 0 1 N Y N -9.356 -28.546 -24.408 -2.955 -1.604 0.522 HO1 0MK 17 0MK HO2 H8 H 0 1 N Y N -8.208 -29.951 -25.241 -2.555 1.671 -0.391 HO2 0MK 18 0MK HO3 H9 H 0 1 N Y N -10.584 -31.705 -26.936 1.732 1.562 1.321 HO3 0MK 19 0MK HO4 H10 H 0 1 N Y N -10.420 -30.203 -30.586 3.446 -0.802 -0.381 HO4 0MK 20 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 0MK O4 C4 SING N N 1 0MK C4 C5 SING N N 2 0MK C4 C3 SING N N 3 0MK C5 O5 SING N N 4 0MK C3 O3 SING N N 5 0MK C3 C2 SING N N 6 0MK O5 C1 SING N N 7 0MK C2 C1 SING N N 8 0MK C2 O2 SING N N 9 0MK C1 O1 SING N N 10 0MK C1 H1 SING N N 11 0MK C2 H2 SING N N 12 0MK C3 H3 SING N N 13 0MK C4 H4 SING N N 14 0MK C5 H51 SING N N 15 0MK C5 H52 SING N N 16 0MK O1 HO1 SING N N 17 0MK O2 HO2 SING N N 18 0MK O3 HO3 SING N N 19 0MK O4 HO4 SING N N 20 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 0MK SMILES ACDLabs 12.01 "C1(O)C(O)C(O)C(CO1)O" 0MK InChI InChI 1.03 "InChI=1S/C5H10O5/c6-2-1-10-5(9)4(8)3(2)7/h2-9H,1H2/t2-,3-,4-,5-/m0/s1" 0MK InChIKey InChI 1.03 SRBFZHDQGSBBOR-FCAWWPLPSA-N 0MK SMILES_CANONICAL CACTVS 3.385 "O[C@H]1CO[C@H](O)[C@@H](O)[C@H]1O" 0MK SMILES CACTVS 3.385 "O[CH]1CO[CH](O)[CH](O)[CH]1O" 0MK SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C1[C@@H]([C@@H]([C@@H]([C@H](O1)O)O)O)O" 0MK SMILES "OpenEye OEToolkits" 1.7.6 "C1C(C(C(C(O1)O)O)O)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 0MK "SYSTEMATIC NAME" ACDLabs 12.01 beta-L-ribopyranose 0MK "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2S,3S,4S,5S)-oxane-2,3,4,5-tetrol" 0MK "CONDENSED IUPAC CARBOHYDRATE SYMBOL" GMML 1.0 LRibpb 0MK "COMMON NAME" GMML 1.0 b-L-ribopyranose 0MK "IUPAC CARBOHYDRATE SYMBOL" PDB-CARE 1.0 b-L-Ribp 0MK "SNFG CARBOHYDRATE SYMBOL" GMML 1.0 Rib # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support 0MK "CARBOHYDRATE ISOMER" L PDB ? 0MK "CARBOHYDRATE RING" pyranose PDB ? 0MK "CARBOHYDRATE ANOMER" beta PDB ? 0MK "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 0MK "Create component" 2012-03-01 RCSB 0MK "Initial release" 2013-03-20 RCSB 0MK "Other modification" 2019-08-12 RCSB 0MK "Other modification" 2019-12-19 RCSB 0MK "Other modification" 2020-07-03 RCSB 0MK "Modify name" 2020-07-17 RCSB 0MK "Modify synonyms" 2020-07-17 RCSB 0MK "Modify atom id" 2020-07-17 RCSB 0MK "Modify component atom id" 2020-07-17 RCSB ##