data_0QF # _chem_comp.id 0QF _chem_comp.name ;N-[(1S)-2-{[(2S,3R,4S)-1-cyclohexyl-3,4-dihydroxy-6-methylheptan-2-yl]amino}-1-(ethylsulfanyl)-2-oxoethyl]-Nalpha-(morp holin-4-ylsulfonyl)-L-phenylalaninamide ; _chem_comp.type peptide-like _chem_comp.pdbx_type HETAIN _chem_comp.formula "C31 H52 N4 O7 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "PD-133,450" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2010-02-05 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 656.897 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 0QF _chem_comp.pdbx_model_coordinates_details "not provided" _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1EPQ _chem_comp.pdbx_subcomponent_list "SOT PHE GSC XAO" _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 0QF O1 O7 O 0 1 N N N 2.090 24.590 23.157 5.713 -4.014 1.273 O1 SOT 1 0QF C2 C30 C 0 1 N N N 0.843 24.679 22.463 6.239 -3.712 -0.022 C2 SOT 2 0QF C3 C28 C 0 1 N N N 1.031 24.755 20.936 5.211 -2.887 -0.804 C3 SOT 3 0QF N4 N4 N 0 1 N N N 2.362 25.299 20.633 4.812 -1.737 0.023 N4 SOT 4 0QF C5 C29 C 0 1 N N N 3.565 24.510 20.936 4.392 -1.995 1.409 C5 SOT 5 0QF C6 C311 C 0 1 N N N 3.734 24.399 22.463 5.460 -2.864 2.084 C6 SOT 6 0QF S S1 S 0 1 N N N 2.513 26.858 19.922 4.835 -0.198 -0.589 S SOT 7 0QF O1S O1S O 0 1 N N N 2.915 27.757 20.973 4.950 0.675 0.527 O1S SOT 8 0QF O2S O2S O 0 1 N N N 1.380 27.497 19.305 5.762 -0.209 -1.666 O2S SOT 9 0QF N N1 N 0 1 N N N 3.318 26.867 18.881 3.346 0.087 -1.255 N PHE 10 0QF CA CA1 C 0 1 N N S 3.988 28.078 18.420 2.157 0.127 -0.400 CA PHE 11 0QF C C1 C 0 1 N N N 3.295 28.628 17.198 0.982 -0.447 -1.148 C PHE 12 0QF O O1 O 0 1 N N N 2.837 27.872 16.337 1.123 -0.850 -2.284 O PHE 13 0QF CB CB1 C 0 1 N N N 5.422 27.772 18.049 1.856 1.576 -0.012 CB PHE 14 0QF CG CG1 C 0 1 Y N N 6.326 27.918 19.242 2.978 2.110 0.841 CG PHE 15 0QF CD1 CD1 C 0 1 Y N N 6.335 29.124 19.938 4.059 2.737 0.249 CD1 PHE 16 0QF CD2 CD2 C 0 1 Y N N 7.120 26.847 19.635 2.924 1.979 2.216 CD2 PHE 17 0QF CE1 CE1 C 0 1 Y N N 7.153 29.266 21.052 5.088 3.227 1.031 CE1 PHE 18 0QF CE2 CE2 C 0 1 Y N N 7.941 26.986 20.755 3.953 2.470 2.999 CE2 PHE 19 0QF CZ CZ C 0 1 Y N N 7.956 28.197 21.464 5.036 3.091 2.406 CZ PHE 20 0QF N1 N2 N 0 1 N N N 3.245 29.937 17.164 -0.227 -0.513 -0.556 N GSC 21 0QF CA1 CA2 C 0 1 N N S 2.639 30.663 16.050 -1.393 -0.966 -1.318 CA GSC 22 0QF C1 C2 C 0 1 N N N 3.344 32.007 15.876 -2.561 -0.057 -1.038 C GSC 23 0QF O2 O3 O 0 1 N N N 2.963 33.013 16.488 -3.030 0.620 -1.928 O GSC 24 0QF S1 S3 S 0 1 N N N 0.822 30.979 16.288 -1.814 -2.661 -0.828 S GSC 25 0QF C11 C31 C 0 1 N N N -0.230 29.496 15.891 -1.244 -3.648 -2.239 C1 GSC 26 0QF C21 C32 C 0 1 N N N -1.561 29.864 15.234 -1.643 -5.111 -2.033 C2 GSC 27 0QF C12 C3 C 0 1 N N S 5.167 33.184 14.736 -4.279 0.815 0.454 C1 XAO 28 0QF N2 N3 N 0 1 N N N 4.368 31.985 15.039 -3.086 0.004 0.202 N XAO 29 0QF C22 C23 C 0 1 N N R 4.879 33.650 13.301 -3.864 2.264 0.717 C2 XAO 30 0QF O21 O23 O 0 1 N N N 5.233 32.629 12.377 -3.005 2.314 1.858 O2 XAO 31 0QF C31 C33 C 0 1 N N S 3.385 33.969 13.162 -3.123 2.812 -0.504 C3 XAO 32 0QF O3 O33 O 0 1 N N N 3.019 35.153 14.058 -3.983 2.763 -1.645 O3 XAO 33 0QF C4 C43 C 0 1 N N N 3.028 34.330 11.717 -2.708 4.261 -0.241 C4 XAO 34 0QF C51 C53 C 0 1 N N N 1.526 34.633 11.620 -1.893 4.782 -1.426 C5 XAO 35 0QF C61 C63 C 0 1 N N N 0.718 33.347 11.820 -1.605 6.272 -1.233 C6 XAO 36 0QF C7 C73 C 0 1 N N N 1.191 35.218 10.246 -0.572 4.014 -1.512 C7 XAO 37 0QF "C7'" "C7'" C 0 1 N N N 6.663 32.880 14.900 -5.020 0.267 1.675 "C7'" XAO 38 0QF "C1'" "C1'" C 0 1 N N N 7.029 32.323 16.287 -5.513 -1.150 1.378 "C1'" XAO 39 0QF "C2'" "C2'" C 0 1 N N N 6.676 33.341 17.382 -6.574 -1.101 0.276 "C2'" XAO 40 0QF "C6'" "C6'" C 0 1 N N N 8.407 32.051 16.345 -6.122 -1.754 2.645 "C6'" XAO 41 0QF "C3'" "C3'" C 0 1 N N N 6.991 32.763 18.769 -7.067 -2.519 -0.020 "C3'" XAO 42 0QF "C5'" "C5'" C 0 1 N N N 8.768 31.389 17.679 -6.616 -3.172 2.349 "C5'" XAO 43 0QF "C4'" "C4'" C 0 1 N N N 8.457 32.336 18.835 -7.676 -3.123 1.247 "C4'" XAO 44 0QF H21 H49 H 0 1 N N N 0.246 23.785 22.699 7.161 -3.140 0.084 H21 SOT 45 0QF H22 H50 H 0 1 N N N 0.320 25.587 22.797 6.444 -4.640 -0.556 H22 SOT 46 0QF H31 H45 H 0 1 N N N 0.940 23.747 20.505 5.656 -2.533 -1.735 H31 SOT 47 0QF H32 H46 H 0 1 N N N 0.260 25.410 20.504 4.338 -3.501 -1.025 H32 SOT 48 0QF H51 H47 H 0 1 N N N 3.462 23.504 20.504 4.295 -1.051 1.945 H51 SOT 49 0QF H52 H48 H 0 1 N N N 4.447 25.006 20.504 3.437 -2.520 1.412 H52 SOT 50 0QF H61 H51 H 0 1 N N N 4.407 25.185 22.837 5.105 -3.181 3.065 H61 SOT 51 0QF H62 H52 H 0 1 N N N 4.159 23.422 22.736 6.379 -2.289 2.197 H62 SOT 52 0QF H HN1 H 0 1 N N N 2.757 26.565 18.110 3.262 0.228 -2.211 H PHE 53 0QF HA HA1 H 0 1 N N N 3.955 28.815 19.236 2.337 -0.461 0.500 HA PHE 54 0QF HB2 HB1 H 0 1 N N N 5.483 26.739 17.677 1.765 2.182 -0.913 HB2 PHE 55 0QF HB3 HB1A H 0 1 N N N 5.747 28.472 17.265 0.923 1.615 0.550 HB3 PHE 56 0QF HD1 HD1 H 0 1 N N N 5.710 29.943 19.614 4.099 2.843 -0.825 HD1 PHE 57 0QF HD2 HD2 H 0 1 N N N 7.102 25.920 19.081 2.077 1.494 2.680 HD2 PHE 58 0QF HE1 HE1 H 0 1 N N N 7.169 30.198 21.598 5.932 3.716 0.568 HE1 PHE 59 0QF HE2 HE2 H 0 1 N N N 8.563 26.164 21.075 3.910 2.368 4.073 HE2 PHE 60 0QF HZ HZ H 0 1 N N N 8.590 28.304 22.332 5.840 3.474 3.017 HZ PHE 61 0QF H1 HN2 H 0 1 N N N 3.634 30.456 17.925 -0.325 -0.260 0.375 H GSC 62 0QF HA1 HA2 H 0 1 N N N 2.755 30.028 15.159 -1.162 -0.943 -2.383 HA GSC 63 0QF H11 H31 H 0 1 N N N 0.330 28.851 15.198 -1.702 -3.272 -3.154 H11 GSC 64 0QF H12 H31A H 0 1 N N N -0.444 28.963 16.829 -0.159 -3.576 -2.318 H12 GSC 65 0QF H211 H32 H 0 0 N N N -2.133 28.948 15.026 -1.301 -5.704 -2.881 H21 GSC 66 0QF H221 H32A H 0 0 N N N -2.138 30.510 15.912 -1.186 -5.487 -1.118 H22 GSC 67 0QF H23 H32B H 0 1 N N N -1.369 30.399 14.292 -2.728 -5.183 -1.954 H23 GSC 68 0QF H13 H3 H 0 1 N N N 4.891 33.985 15.438 -4.935 0.777 -0.416 H1 XAO 69 0QF HN1 HN3 H 0 1 N N N 4.608 31.122 14.595 -2.673 -0.490 0.928 HN1 XAO 70 0QF H2 H23 H 0 1 N N N 5.474 34.550 13.087 -4.752 2.868 0.904 H2 XAO 71 0QF HO2 HO23 H 0 1 N N N 5.052 32.925 11.493 -2.193 1.798 1.761 HO2 XAO 72 0QF H3 H33 H 0 1 N N N 2.824 33.071 13.461 -2.235 2.209 -0.692 H3 XAO 73 0QF HO3 HO33 H 0 1 N N N 2.093 35.345 13.967 -4.794 3.279 -1.548 HO3 XAO 74 0QF H41 H43 H 0 1 N N N 3.601 35.217 11.409 -3.599 4.877 -0.115 H41 XAO 75 0QF H42 H43A H 0 1 N N N 3.275 33.486 11.057 -2.104 4.307 0.665 H42 XAO 76 0QF H5 H53 H 0 1 N N N 1.268 35.361 12.403 -2.457 4.637 -2.347 H5 XAO 77 0QF H611 H63 H 0 0 N N N -0.356 33.573 11.749 -1.100 6.662 -2.116 H61 XAO 78 0QF H621 H63A H 0 0 N N N 0.991 32.618 11.043 -2.543 6.806 -1.084 H62 XAO 79 0QF H63 H63B H 0 1 N N N 0.939 32.926 12.812 -0.967 6.408 -0.359 H63 XAO 80 0QF H71 H73 H 0 1 N N N 0.113 35.430 10.190 -0.776 2.953 -1.650 H71 XAO 81 0QF H72 H73A H 0 1 N N N 1.756 36.150 10.097 0.010 4.385 -2.356 H72 XAO 82 0QF H73 H73B H 0 1 N N N 1.463 34.495 9.463 -0.007 4.159 -0.591 H73 XAO 83 0QF "H7'1" "H7'" H 0 0 N N N 6.945 32.131 14.145 -4.345 0.245 2.530 "H7'1" XAO 84 0QF "H7'2" "H7'A" H 0 0 N N N 7.221 33.816 14.749 -5.872 0.908 1.901 "H7'2" XAO 85 0QF "H1'" "H1'" H 0 1 N N N 6.458 31.397 16.451 -4.676 -1.765 1.049 "H1'" XAO 86 0QF "H2'1" "H2'" H 0 0 N N N 7.267 34.256 17.229 -7.411 -0.487 0.605 "H2'1" XAO 87 0QF "H2'2" "H2'A" H 0 0 N N N 5.603 33.577 17.324 -6.140 -0.671 -0.626 "H2'2" XAO 88 0QF "H6'1" "H6'" H 0 0 N N N 8.675 31.373 15.522 -5.367 -1.789 3.431 "H6'1" XAO 89 0QF "H6'2" "H6'A" H 0 0 N N N 8.965 32.994 16.248 -6.960 -1.139 2.974 "H6'2" XAO 90 0QF "H3'1" "H3'" H 0 0 N N N 6.801 33.530 19.534 -7.822 -2.484 -0.805 "H3'1" XAO 91 0QF "H3'2" "H3'A" H 0 0 N N N 6.349 31.889 18.953 -6.229 -3.134 -0.349 "H3'2" XAO 92 0QF "H5'1" "H5'" H 0 0 N N N 8.180 30.467 17.797 -5.778 -3.786 2.020 "H5'1" XAO 93 0QF "H5'2" "H5'A" H 0 0 N N N 9.841 31.148 17.686 -7.049 -3.602 3.252 "H5'2" XAO 94 0QF "H4'1" "H4'" H 0 0 N N N 9.100 33.225 18.763 -8.514 -2.508 1.576 "H4'1" XAO 95 0QF "H4'2" "H4'A" H 0 0 N N N 8.646 31.822 19.789 -8.027 -4.133 1.036 "H4'2" XAO 96 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 0QF O1 C2 SING N N 1 0QF O1 C6 SING N N 2 0QF C2 C3 SING N N 3 0QF C2 H21 SING N N 4 0QF C2 H22 SING N N 5 0QF C3 N4 SING N N 6 0QF C3 H31 SING N N 7 0QF C3 H32 SING N N 8 0QF N4 C5 SING N N 9 0QF N4 S SING N N 10 0QF C5 C6 SING N N 11 0QF C5 H51 SING N N 12 0QF C5 H52 SING N N 13 0QF C6 H61 SING N N 14 0QF C6 H62 SING N N 15 0QF S O1S DOUB N N 16 0QF S O2S DOUB N N 17 0QF N CA SING N N 18 0QF N H SING N N 19 0QF CA C SING N N 20 0QF CA CB SING N N 21 0QF CA HA SING N N 22 0QF C O DOUB N N 23 0QF CB CG SING N N 24 0QF CB HB2 SING N N 25 0QF CB HB3 SING N N 26 0QF CG CD1 DOUB Y N 27 0QF CG CD2 SING Y N 28 0QF CD1 CE1 SING Y N 29 0QF CD1 HD1 SING N N 30 0QF CD2 CE2 DOUB Y N 31 0QF CD2 HD2 SING N N 32 0QF CE1 CZ DOUB Y N 33 0QF CE1 HE1 SING N N 34 0QF CE2 CZ SING Y N 35 0QF CE2 HE2 SING N N 36 0QF CZ HZ SING N N 37 0QF N1 CA1 SING N N 38 0QF N1 H1 SING N N 39 0QF CA1 C1 SING N N 40 0QF CA1 S1 SING N N 41 0QF CA1 HA1 SING N N 42 0QF C1 O2 DOUB N N 43 0QF S1 C11 SING N N 44 0QF C11 C21 SING N N 45 0QF C11 H11 SING N N 46 0QF C11 H12 SING N N 47 0QF C21 H211 SING N N 48 0QF C21 H221 SING N N 49 0QF C21 H23 SING N N 50 0QF C12 N2 SING N N 51 0QF C12 C22 SING N N 52 0QF C12 "C7'" SING N N 53 0QF C12 H13 SING N N 54 0QF N2 HN1 SING N N 55 0QF C22 O21 SING N N 56 0QF C22 C31 SING N N 57 0QF C22 H2 SING N N 58 0QF O21 HO2 SING N N 59 0QF C31 O3 SING N N 60 0QF C31 C4 SING N N 61 0QF C31 H3 SING N N 62 0QF O3 HO3 SING N N 63 0QF C4 C51 SING N N 64 0QF C4 H41 SING N N 65 0QF C4 H42 SING N N 66 0QF C51 C61 SING N N 67 0QF C51 C7 SING N N 68 0QF C51 H5 SING N N 69 0QF C61 H611 SING N N 70 0QF C61 H621 SING N N 71 0QF C61 H63 SING N N 72 0QF C7 H71 SING N N 73 0QF C7 H72 SING N N 74 0QF C7 H73 SING N N 75 0QF "C7'" "C1'" SING N N 76 0QF "C7'" "H7'1" SING N N 77 0QF "C7'" "H7'2" SING N N 78 0QF "C1'" "C2'" SING N N 79 0QF "C1'" "C6'" SING N N 80 0QF "C1'" "H1'" SING N N 81 0QF "C2'" "C3'" SING N N 82 0QF "C2'" "H2'1" SING N N 83 0QF "C2'" "H2'2" SING N N 84 0QF "C6'" "C5'" SING N N 85 0QF "C6'" "H6'1" SING N N 86 0QF "C6'" "H6'2" SING N N 87 0QF "C3'" "C4'" SING N N 88 0QF "C3'" "H3'1" SING N N 89 0QF "C3'" "H3'2" SING N N 90 0QF "C5'" "C4'" SING N N 91 0QF "C5'" "H5'1" SING N N 92 0QF "C5'" "H5'2" SING N N 93 0QF "C4'" "H4'1" SING N N 94 0QF "C4'" "H4'2" SING N N 95 0QF S N SING N N 96 0QF C N1 SING N N 97 0QF C1 N2 SING N N 98 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 0QF SMILES ACDLabs 12.01 "O=S(=O)(N1CCOCC1)NC(C(=O)NC(SCC)C(=O)NC(CC2CCCCC2)C(O)C(O)CC(C)C)Cc3ccccc3" 0QF SMILES_CANONICAL CACTVS 3.370 "CCS[C@H](NC(=O)[C@H](Cc1ccccc1)N[S](=O)(=O)N2CCOCC2)C(=O)N[C@@H](CC3CCCCC3)[C@@H](O)[C@@H](O)CC(C)C" 0QF SMILES CACTVS 3.370 "CCS[CH](NC(=O)[CH](Cc1ccccc1)N[S](=O)(=O)N2CCOCC2)C(=O)N[CH](CC3CCCCC3)[CH](O)[CH](O)CC(C)C" 0QF SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "CCS[C@@H](C(=O)N[C@@H](CC1CCCCC1)[C@H]([C@H](CC(C)C)O)O)NC(=O)[C@H](Cc2ccccc2)NS(=O)(=O)N3CCOCC3" 0QF SMILES "OpenEye OEToolkits" 1.7.0 "CCSC(C(=O)NC(CC1CCCCC1)C(C(CC(C)C)O)O)NC(=O)C(Cc2ccccc2)NS(=O)(=O)N3CCOCC3" 0QF InChI InChI 1.03 "InChI=1S/C31H52N4O7S2/c1-4-43-31(30(39)32-25(20-23-11-7-5-8-12-23)28(37)27(36)19-22(2)3)33-29(38)26(21-24-13-9-6-10-14-24)34-44(40,41)35-15-17-42-18-16-35/h6,9-10,13-14,22-23,25-28,31,34,36-37H,4-5,7-8,11-12,15-21H2,1-3H3,(H,32,39)(H,33,38)/t25-,26-,27-,28+,31-/m0/s1" 0QF InChIKey InChI 1.03 KJPRBAWNGKPDKH-WKEJTYEPSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 0QF "SYSTEMATIC NAME" ACDLabs 12.01 "N-[(1S)-2-{[(2S,3R,4S)-1-cyclohexyl-3,4-dihydroxy-6-methylheptan-2-yl]amino}-1-(ethylsulfanyl)-2-oxoethyl]-Nalpha-(morpholin-4-ylsulfonyl)-L-phenylalaninamide" 0QF "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "(2S)-N-[(1S)-2-[[(2S,3R,4S)-1-cyclohexyl-3,4-dihydroxy-6-methyl-heptan-2-yl]amino]-1-ethylsulfanyl-2-oxo-ethyl]-2-(morpholin-4-ylsulfonylamino)-3-phenyl-propanamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 0QF "Create component" 2010-02-05 RCSB 0QF "Other modification" 2011-11-18 RCSB 0QF "Modify aromatic_flag" 2011-06-04 RCSB 0QF "Modify descriptor" 2011-06-04 RCSB 0QF "Modify name" 2020-05-16 RCSB 0QF "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 0QF _pdbx_chem_comp_synonyms.name "PD-133,450" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##