data_0TK # _chem_comp.id 0TK _chem_comp.name "(2R)-2,5-diaminopentanoyl dihydrogen phosphate" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C5 H13 N2 O5 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "phosphorylated D-ornithine" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2012-06-06 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 212.141 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 0TK _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4FFO _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 0TK C1 C1 C 0 1 N N R 16.364 8.811 27.628 -1.115 0.864 -0.510 C1 0TK 1 0TK C2 C2 C 0 1 N N N 17.736 8.422 28.246 -2.001 -0.142 0.228 C2 0TK 2 0TK C3 C3 C 0 1 N N N 18.107 6.928 28.008 -3.430 -0.053 -0.310 C3 0TK 3 0TK O12 O12 O 0 1 N N N 13.709 9.769 31.271 3.347 -1.562 -0.889 O12 0TK 4 0TK P11 P11 P 0 1 N N N 14.917 9.743 30.370 2.582 -0.412 -0.062 P11 0TK 5 0TK O13 O13 O 0 1 N N N 16.223 9.988 31.316 2.583 -0.786 1.504 O13 0TK 6 0TK O14 O14 O 0 1 N N N 14.795 10.960 29.336 3.274 0.882 -0.261 O14 0TK 7 0TK O10 O10 O 0 1 N N N 14.928 8.323 29.579 1.064 -0.295 -0.585 O10 0TK 8 0TK C8 C8 C 0 1 N N N 15.166 8.119 28.251 0.316 0.692 -0.068 C8 0TK 9 0TK O9 O9 O 0 1 N N N 14.485 7.361 27.556 0.789 1.443 0.752 O9 0TK 10 0TK N7 N7 N 0 1 N N N 16.388 8.590 26.161 -1.562 2.229 -0.201 N7 0TK 11 0TK C4 C4 C 0 1 N N N 19.170 6.447 29.026 -4.316 -1.059 0.427 C4 0TK 12 0TK N5 N5 N 0 1 N N N 19.054 4.981 29.209 -5.688 -0.974 -0.089 N5 0TK 13 0TK H1 H1 H 0 1 N N N 16.237 9.890 27.797 -1.186 0.692 -1.584 H1 0TK 14 0TK H2 H2 H 0 1 N N N 18.516 9.053 27.795 -1.615 -1.149 0.070 H2 0TK 15 0TK H3 H3 H 0 1 N N N 17.697 8.606 29.330 -1.999 0.085 1.294 H3 0TK 16 0TK H4 H4 H 0 1 N N N 17.202 6.312 28.116 -3.816 0.954 -0.153 H4 0TK 17 0TK H5 H5 H 0 1 N N N 18.508 6.816 26.990 -3.432 -0.280 -1.376 H5 0TK 18 0TK H6 H6 H 0 1 N N N 13.148 10.496 31.028 4.269 -1.688 -0.626 H6 0TK 19 0TK H7 H7 H 0 1 N N N 16.648 10.800 31.066 2.145 -1.624 1.708 H7 0TK 20 0TK H8 H8 H 0 1 N N N 15.502 8.842 25.771 -1.505 2.413 0.789 H8 0TK 21 0TK H9 H9 H 0 1 N N N 17.105 9.153 25.751 -1.034 2.910 -0.726 H9 0TK 22 0TK H11 H11 H 0 1 N N N 20.174 6.691 28.650 -3.930 -2.067 0.270 H11 0TK 23 0TK H12 H12 H 0 1 N N N 19.008 6.950 29.990 -4.314 -0.832 1.493 H12 0TK 24 0TK H13 H13 H 0 1 N N N 19.741 4.671 29.867 -5.709 -1.117 -1.088 H13 0TK 25 0TK H14 H14 H 0 1 N N N 18.141 4.759 29.551 -6.294 -1.630 0.382 H14 0TK 26 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 0TK N7 C1 SING N N 1 0TK O9 C8 DOUB N N 2 0TK C1 C2 SING N N 3 0TK C1 C8 SING N N 4 0TK C3 C2 SING N N 5 0TK C3 C4 SING N N 6 0TK C8 O10 SING N N 7 0TK C4 N5 SING N N 8 0TK O14 P11 DOUB N N 9 0TK O10 P11 SING N N 10 0TK P11 O12 SING N N 11 0TK P11 O13 SING N N 12 0TK C1 H1 SING N N 13 0TK C2 H2 SING N N 14 0TK C2 H3 SING N N 15 0TK C3 H4 SING N N 16 0TK C3 H5 SING N N 17 0TK O12 H6 SING N N 18 0TK O13 H7 SING N N 19 0TK N7 H8 SING N N 20 0TK N7 H9 SING N N 21 0TK C4 H11 SING N N 22 0TK C4 H12 SING N N 23 0TK N5 H13 SING N N 24 0TK N5 H14 SING N N 25 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 0TK SMILES ACDLabs 12.01 "O=P(OC(=O)C(N)CCCN)(O)O" 0TK InChI InChI 1.03 "InChI=1S/C5H13N2O5P/c6-3-1-2-4(7)5(8)12-13(9,10)11/h4H,1-3,6-7H2,(H2,9,10,11)/t4-/m1/s1" 0TK InChIKey InChI 1.03 MNDHJWIHMSHXOW-SCSAIBSYSA-N 0TK SMILES_CANONICAL CACTVS 3.370 "NCCC[C@@H](N)C(=O)O[P](O)(O)=O" 0TK SMILES CACTVS 3.370 "NCCC[CH](N)C(=O)O[P](O)(O)=O" 0TK SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C(C[C@H](C(=O)OP(=O)(O)O)N)CN" 0TK SMILES "OpenEye OEToolkits" 1.7.6 "C(CC(C(=O)OP(=O)(O)O)N)CN" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 0TK "SYSTEMATIC NAME" ACDLabs 12.01 "(2R)-2,5-diaminopentanoyl dihydrogen phosphate" 0TK "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "phosphono (2R)-2,5-bis(azanyl)pentanoate" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 0TK "Create component" 2012-06-06 RCSB 0TK "Initial release" 2012-09-14 RCSB 0TK "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 0TK _pdbx_chem_comp_synonyms.name "phosphorylated D-ornithine" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##